Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062532.1 Olea europaea HOM05D004341 ORTHO05D005075 3.3e-105 385.2 212 100.0
Oeu020261.1 Olea europaea HOM05D004341 ORTHO05D005075 5.3e-87 324.7 210 86.2
Nitab4.5_0000414g0070 Nicotiana tabacum HOM05D004341 ORTHO05D005075 6.7e-74 281.2 210 77.6
CAN.G1144.22 Capsicum annuum HOM05D004341 ORTHO05D005075 6.2e-72 274.6 210 73.8
SalBow5G0282 Salvia bowleyana HOM05D004341 ORTHO05D005075 1.1e-71 273.9 210 73.8
Cc09_g04540 Coffea canephora HOM05D004341 ORTHO05D005075 3.1e-71 272.3 210 71.9
Peaxi162Scf00119g01515 Petunia axillaris HOM05D004341 ORTHO05D005075 9.0e-71 270.8 211 76.3
Nitab4.5_0000422g0150 Nicotiana tabacum HOM05D004341 ORTHO05D005075 3.5e-67 258.8 210 71.9
CAN.G359.8 Capsicum annuum HOM05D004341 ORTHO05D005075 4.6e-67 258.5 210 71.0
Dinv17497 Davidia involucrata HOM05D004341 ORTHO05D005075 1.0e-66 257.3 211 71.6
Lsat_1_v5_gn_4_45480 Lactuca sativa HOM05D004341 ORTHO05D005075 1.0e-66 257.3 211 72.5
Nitab4.5_0012569g0030 Nicotiana tabacum HOM05D004341 ORTHO05D005075 1.3e-66 256.9 210 73.8
MSTRG.22399 Avicennia marina HOM05D004341 ORTHO05D005075 1.9e-65 253.1 211 71.6
Hma1.2p1_0701F.1_g205915 Hydrangea macrophylla HOM05D004341 ORTHO05D005075 2.5e-65 252.7 212 72.2
ECA234G2847 Erigeron canadensis HOM05D004341 ORTHO05D005075 1.3e-64 250.4 210 71.0
Peaxi162Scf00188g00814 Petunia axillaris HOM05D004341 ORTHO05D005075 1.6e-64 250.0 193 73.6
Nn1g09858 Nelumbo nucifera HOM05D004341 ORTHO05D005075 4.8e-64 248.4 211 69.7
CSS0011539 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 8.2e-64 247.7 224 67.9
Dinv05280 Davidia involucrata HOM05D004341 ORTHO05D005075 1.1e-63 247.3 211 69.7
Solyc05g010570.3 Solanum lycopersicum HOM05D004341 ORTHO05D005075 1.1e-63 247.3 210 70.0
Sopen05g006350 Solanum pennellii HOM05D004341 ORTHO05D005075 1.1e-63 247.3 210 70.0
HanXRQChr12g0384191 Helianthus annuus HOM05D004341 ORTHO05D005075 1.4e-63 246.9 211 72.0
Lsat_1_v5_gn_3_129240 Lactuca sativa HOM05D004341 ORTHO05D005075 3.1e-63 245.7 210 70.0
SGA_v2.0_scaffold28G11752 Striga asiatica HOM05D004341 ORTHO05D005075 6.9e-63 244.6 212 68.4
unitig_21.g20916 Utricularia gibba HOM05D004341 ORTHO05D005075 9.0e-63 244.2 210 67.6
Manes.16G060700 Manihot esculenta HOM05D004341 ORTHO05D005075 1.2e-62 243.8 215 67.9
EL10Ac3g05823 Beta vulgaris HOM05D004341 ORTHO05D005075 1.5e-62 243.4 213 68.1
Hund04610 Selenicereus undatus HOM05D004341 ORTHO05D005075 3.4e-62 242.3 212 67.5
TAR626G1254 Trochodendron aralioides HOM05D004341 ORTHO05D005075 5.8e-62 241.5 216 67.6
AUR62002184 Chenopodium quinoa HOM05D004341 ORTHO05D005075 3.8e-61 238.8 214 67.3
MELO3C014011.2 Cucumis melo HOM05D004341 ORTHO05D005075 5.0e-61 238.4 221 67.0
Ah.07g207810 Amaranthus hybridus HOM05D004341 ORTHO05D005075 8.4e-61 237.7 214 68.2
Gohir.A10G168600 Gossypium hirsutum HOM05D004341 ORTHO05D005075 1.9e-60 236.5 227 60.4
ClCG00G000170 Citrullus lanatus HOM05D004341 ORTHO05D005075 4.2e-60 235.3 227 63.4
ClCG10G003420 Citrullus lanatus HOM05D004341 ORTHO05D005075 4.2e-60 235.3 227 63.4
PGR083G1473 Punica granatum HOM05D004341 ORTHO05D005075 4.2e-60 235.3 212 68.4
Gorai.011G195600 Gossypium raimondii HOM05D004341 ORTHO05D005075 7.2e-60 234.6 227 63.0
Sed0011196 Sechium edule HOM05D004341 ORTHO05D005075 7.2e-60 234.6 222 65.8
PGSC0003DMG400019653 Solanum tuberosum HOM05D004341 ORTHO05D005075 1.2e-59 233.8 210 67.1
Gohir.D10G174800 Gossypium hirsutum HOM05D004341 ORTHO05D005075 2.1e-59 233.0 227 63.0
Gohir.D13G218100 Gossypium hirsutum HOM05D004341 ORTHO05D005075 2.1e-59 233.0 227 63.9
Gorai.013G248900 Gossypium raimondii HOM05D004341 ORTHO05D005075 2.1e-59 233.0 227 63.9
AUR62015527 Chenopodium quinoa HOM05D004341 ORTHO05D005075 3.5e-59 232.3 214 67.3
Lj1A1153T31 Lonicera japonica HOM05D004341 ORTHO05D005075 1.3e-58 230.3 210 65.7
Cpa.g.c30482 Carica papaya HOM05D004341 ORTHO05D005075 5.1e-58 228.4 212 64.6
Lj7A164T18 Lonicera japonica HOM05D004341 ORTHO05D005075 5.1e-58 228.4 211 66.4
HanXRQChr13g0422931 Helianthus annuus HOM05D004341 ORTHO05D005075 6.7e-58 228.0 210 67.1
Duzib150G1434 Durio zibethinus HOM05D004341 ORTHO05D005075 1.9e-57 226.5 229 62.4
arahy.Tifrunner.gnm1.ann1.W1Y39Q Arachis hypogaea HOM05D004341 ORTHO05D005075 2.5e-57 226.1 234 61.5
Gohir.A13G214400 Gossypium hirsutum HOM05D004341 ORTHO05D005075 3.3e-57 225.7 227 63.4
TWI15G0268 Tripterygium wilfordii HOM05D004341 ORTHO05D005075 5.7e-57 224.9 211 64.0
Thecc.09G217200 Theobroma cacao HOM05D004341 ORTHO05D005075 9.7e-57 224.2 225 62.7
Aqoxy4G00695 Aquilegia oxysepala HOM05D004341 ORTHO05D005075 4.8e-56 221.9 222 62.6
Lalb_Chr06g0163081 Lupinus albus HOM05D004341 ORTHO05D005075 6.3e-56 221.5 212 65.1
GSVIVG01038073001 Vitis vinifera HOM05D004341 ORTHO05D005075 8.2e-56 221.1 210 66.7
CDE04G3252 Ceratophyllum demersum HOM05D004341 ORTHO05D005075 1.1e-55 220.7 208 65.9
arahy.Tifrunner.gnm1.ann1.22GDSE Arachis hypogaea HOM05D004341 ORTHO05D005075 2.4e-55 219.5 234 61.1
arahy.Tifrunner.gnm1.ann1.VCV969 Arachis hypogaea HOM05D004341 ORTHO05D005075 2.4e-55 219.5 234 61.1
HPP92_006338 Vanilla planifolia HOM05D004341 ORTHO05D005075 3.1e-55 219.2 206 67.5
Ciclev10016661m.g Citrus clementina HOM05D004341 ORTHO05D005075 2.6e-54 216.1 212 59.9
Aa31LG9G8550 Aethionema arabicum HOM05D004341 ORTHO05D005075 3.4e-54 215.7 210 61.9
Potri.001G073500 Populus trichocarpa HOM05D004341 ORTHO05D005075 3.4e-54 215.7 227 61.2
Hund11810 Selenicereus undatus HOM05D004341 ORTHO05D005075 5.9e-54 214.9 233 57.9
MBI06_g30999_MAGBIO Magnolia biondii HOM05D004341 ORTHO05D005075 7.7e-54 214.5 210 64.8
vmacro03576 Vaccinium macrocarpon HOM05D004341 ORTHO05D005075 1.0e-53 214.2 265 55.5
CSS0011039 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 1.3e-53 213.8 226 61.5
ECA240G4781 Erigeron canadensis HOM05D006102 ORTHO05D007550 1.3e-53 213.8 202 66.3
Psat6g047640 Pisum sativum HOM05D004341 ORTHO05D005075 1.3e-53 213.8 212 62.7
RcHm_v2.0_Chr5g0022151 Rosa chinensis HOM05D004341 ORTHO05D005075 2.2e-53 213.0 243 57.2
Solyc05g018120.2 Solanum lycopersicum HOM05D004341 ORTHO05D005075 2.9e-53 212.6 124 86.3
THA.LOC104806232 Tarenaya hassleriana HOM05D004341 ORTHO05D005075 2.9e-53 212.6 213 61.5
QL11p010678 Quercus lobata HOM05D004341 ORTHO05D005075 3.8e-53 212.2 125 85.6
Ca_26283_v3 Cicer arietinum L. HOM05D004341 ORTHO05D005075 8.5e-53 211.1 212 62.7
Rhsim13G0136700 Rhododendron simsii HOM05D004341 ORTHO05D005075 1.9e-52 209.9 124 87.1
CiPaw.10G108700 Carya illinoinensis HOM05D004341 ORTHO05D005075 5.5e-52 208.4 125 84.0
Prupe.4G121600 Prunus persica HOM05D004341 ORTHO05D005075 5.5e-52 208.4 125 84.0
Cfa001170 Carpinus fangiana HOM05D004341 ORTHO05D005075 2.7e-51 206.1 124 83.9
MD10G1223700 Malus domestica HOM05D004341 ORTHO05D005075 3.6e-51 205.7 223 61.4
Nitab4.5_0015757g0010 Nicotiana tabacum HOM05D004341 ORTHO05D005075 1.0e-50 204.1 169 75.1
FAN21G2305 Fragaria x ananassa HOM05D004341 ORTHO05D005075 1.4e-50 203.8 237 55.7
Os01g0680400 Oryza sativa ssp. japonica HOM05D004341 ORTHO05D005075 1.4e-50 203.8 215 62.3
Lj3g0018794 Lotus japonicus HOM05D004341 ORTHO05D005075 2.3e-50 203.0 210 62.4
Glyma.03G001900 Glycine max HOM05D004341 ORTHO05D005075 3.0e-50 202.6 210 62.4
Lj4g0017726 Lotus japonicus HOM05D004341 ORTHO05D005075 3.0e-50 202.6 217 60.4
Zm00001eb156710 Zea mays HOM05D004341 ORTHO05D005075 3.0e-50 202.6 207 63.8
ATR0737G165 Amborella trichopoda HOM05D004341 ORTHO05D005075 5.1e-50 201.8 210 61.4
FAN16G0631 Fragaria x ananassa HOM05D004341 ORTHO05D005075 6.7e-50 201.4 239 54.0
Medtr1g047200 Medicago truncatula HOM05D004341 ORTHO05D005075 6.7e-50 201.4 217 59.9
CANSAT78G0611 Cannabis sativa HOM05D004341 ORTHO05D005075 1.1e-49 200.7 120 83.3
FvH4_3g13420 Fragaria vesca HOM05D004341 ORTHO05D005075 2.0e-49 199.9 237 54.4
Phvul.010G058500 Phaseolus vulgaris HOM05D004341 ORTHO05D005075 3.3e-49 199.1 210 60.5
VMungo0331G0448 Vigna mungo HOM05D004341 ORTHO05D005075 7.4e-49 198.0 210 61.4
PSO017G7392 Papaver somniferum HOM05D004341 ORTHO05D005075 2.2e-48 196.4 125 78.4
Zm00001eb360430 Zea mays HOM05D004341 ORTHO05D005075 2.2e-48 196.4 207 61.4
AT4G20280 Arabidopsis thaliana HOM05D004341 ORTHO05D005075 3.7e-48 195.7 215 59.1
SHI16737 Sapria himalayana HOM05D004341 ORTHO05D005075 6.3e-48 194.9 200 61.0
AL7G33620 Arabidopsis lyrata HOM05D004341 ORTHO05D005075 1.4e-47 193.7 218 58.7
HPP92_027866 Vanilla planifolia HOM05D004341 ORTHO05D005075 4.1e-47 192.2 192 66.1
Oeu020262.1 Olea europaea HOM05D004341 ORTHO05D005075 6.9e-47 191.4 137 80.3
Thhalv10026240m.g Eutrema salsugineum HOM05D004341 ORTHO05D005075 9.1e-47 191.0 218 55.5
BcaC09g51324 Brassica carinata HOM05D004341 ORTHO05D005075 2.6e-46 189.5 125 74.4
BcaNung03718 Brassica carinata HOM05D004341 ORTHO05D005075 4.5e-46 188.7 125 74.4
Haze_05182 Corylus avellana HOM05D004341 ORTHO05D005075 7.7e-46 188.0 242 52.1
BolC1t01390H Brassica oleracea HOM05D004341 ORTHO05D005075 1.0e-45 187.6 125 73.6
CARHR227110 Cardamine hirsuta HOM05D004341 ORTHO05D005075 1.0e-45 187.6 221 57.5
C01p14250 Brassica napus HOM05D004341 ORTHO05D005075 2.9e-45 186.0 125 73.6
PSO210G4911 Papaver somniferum HOM05D004341 ORTHO05D005075 2.9e-45 186.0 259 48.6
Carub.0007s2089 Capsella rubella HOM05D004341 ORTHO05D005075 5.0e-45 185.3 215 58.1
QL08p059659 Quercus lobata HOM05D004341 ORTHO05D005075 1.9e-44 183.3 209 54.5
TPR.G20753 Trifolium pratense HOM05D004341 ORTHO05D005075 7.2e-44 181.4 217 56.2
A01p11990 Brassica napus HOM05D004341 ORTHO05D005075 1.2e-43 180.6 210 55.7
Sc19g0001970 Simmondsia chinensis HOM05D004341 ORTHO05D005075 1.2e-43 180.6 104 89.4
BraA01t01141Z Brassica rapa HOM05D004341 ORTHO05D005075 1.6e-43 180.3 210 55.2
DCAR_007769 Daucus carota HOM05D004341 ORTHO05D005075 2.1e-43 179.9 108 86.1
Sp7g18640 Schrenkiella parvula HOM05D004341 ORTHO05D005075 2.1e-43 179.9 213 54.0
Dinv14196 Davidia involucrata HOM05D009083 ORTHO05D005075 3.6e-43 179.1 128 75.0
COL.COLO4_10402 Corchorus olitorius HOM05D004341 ORTHO05D005075 6.7e-42 174.9 216 50.9
Lsat_1_v5_gn_1_1241 Lactuca sativa HOM05D004341 ORTHO05D005075 3.3e-41 172.6 170 65.9
Actinidia34783 Actinidia chinensis HOM05D004341 ORTHO05D005075 5.7e-41 171.8 191 61.3
CiPaw.02G184500 Carya illinoinensis HOM05D004341 ORTHO05D005075 4.8e-40 168.7 208 51.9
AT1G20000 Arabidopsis thaliana HOM05D004341 ORTHO05D005075 2.0e-38 163.3 211 49.3
Eucgr.G01564 Eucalyptus grandis HOM05D004341 ORTHO05D005075 1.7e-37 160.2 95 82.1
AL1G32730 Arabidopsis lyrata HOM05D004341 ORTHO05D005075 2.2e-37 159.8 123 68.3
THA.LOC104812926 Tarenaya hassleriana HOM05D004341 ORTHO05D005075 2.9e-37 159.5 215 51.6
Lsat_1_v5_gn_1_77761 Lactuca sativa HOM05D004341 ORTHO05D005075 1.5e-36 157.1 101 82.2
Pp3c14_26520 Physcomitrium patens HOM05D004341 ORTHO05D005075 7.2e-36 154.8 198 53.5
arahy.Tifrunner.gnm1.ann1.ZMN623 Arachis hypogaea HOM05D004341 ORTHO05D005075 9.4e-36 154.5 194 55.7
BcaB04g20244 Brassica carinata HOM05D004341 ORTHO05D005075 9.4e-36 154.5 213 47.9
CBR_g22400 Chara braunii HOM05D004341 ORTHO05D005075 1.6e-35 153.7 125 62.4
BcaB04g18416 Brassica carinata HOM05D004341 ORTHO05D005075 1.0e-34 151.0 125 64.0
A08p14740 Brassica napus HOM05D004341 ORTHO05D005075 6.7e-34 148.3 202 50.0
BraA08t33460Z Brassica rapa HOM05D004341 ORTHO05D005075 6.7e-34 148.3 202 50.0
BcaB04g20259 Brassica carinata HOM05D004341 ORTHO05D005075 8.8e-34 147.9 129 63.6
Nitab4.5_0015757g0020 Nicotiana tabacum HOM05D004341 ORTHO05D005075 2.0e-33 146.7 136 69.9
Mapoly0006s0068 Marchantia polymorpha HOM05D004341 ORTHO05D005075 2.6e-33 146.4 123 62.6
FAN07G2754 Fragaria x ananassa HOM05D004341 ORTHO05D005075 4.4e-33 145.6 107 72.0
FAN25G3107 Fragaria x ananassa HOM05D004341 ORTHO05D005075 2.8e-32 142.9 208 49.5
BolC1t03652H Brassica oleracea HOM05D004341 ORTHO05D005075 1.4e-31 140.6 215 44.7
TPR.G30192 Trifolium pratense HOM05D004341 ORTHO05D005075 1.4e-31 140.6 209 47.4
BcaC09g49417 Brassica carinata HOM05D004341 ORTHO05D005075 2.4e-31 139.8 131 59.5
Sabra01G0051800 Salix brachista HOM05D004341 ORTHO05D005075 5.0e-29 132.1 115 66.1
BcaC01g00664 Brassica carinata HOM05D004341 ORTHO05D005075 9.4e-28 127.9 128 55.5
BcaB03g11664 Brassica carinata HOM05D004341 ORTHO05D005075 1.2e-27 127.5 210 47.6
Medtr0085s0030 Medicago truncatula HOM05D004341 ORTHO05D005075 1.2e-27 127.5 169 55.6
SMO115G0310 Selaginella moellendorffii HOM05D004341 ORTHO05D005075 2.7e-27 126.3 101 59.4
Haze_17072 Corylus avellana HOM05D000046 ORTHO05D005075 2.0e-25 120.2 222 43.7
CsaV3_3G003450 Cucumis sativus L. HOM05D004341 ORTHO05D005075 7.5e-25 118.2 148 58.1
BcaB04g20257 Brassica carinata HOM05D004341 ORTHO05D005075 3.5e-22 109.4 81 69.1
FAN11G3831 Fragaria x ananassa HOM05D004341 ORTHO05D005075 1.7e-21 107.1 82 69.5
Cfa001469 Carpinus fangiana HOM05D001719 ORTHO05D007646 3.7e-16 89.4 168 44.0
Dinv14194 Davidia involucrata HOM05D004341 ORTHO05D005075 4.9e-16 89.0 109 56.9
Potri.003G157450 Populus trichocarpa HOM05D004341 ORTHO05D005075 1.2e-14 84.3 48 81.2
PRCOL_00001421 Prasinoderma coloniale HOM05D004341 ORTHO05D005075 5.9e-14 82.0 101 42.6
Cre01.g011350 Chlamydomonas reinhardtii HOM05D004341 ORTHO05D005075 3.8e-13 79.3 104 40.4
BolC3t20569H Brassica oleracea HOM05D001435 ORTHO05D001304 1.1e-12 77.8 65 60.0
Sc19g0001960 Simmondsia chinensis HOM05D004341 ORTHO05D005075 2.8e-11 73.2 108 51.9
SEGI_17825 Sequoiadendron giganteum HOM05D004341 ORTHO05D005075 1.8e-10 70.5 147 44.9
MCO01G288 Micromonas commoda HOM05D004341 ORTHO05D005075 1.5e-09 67.4 94 46.8
TWI63G1746 Tripterygium wilfordii HOM05D004341 ORTHO05D005075 2.0e-09 67.0 107 45.8
TPR.G20312 Trifolium pratense HOM05D004341 ORTHO05D005075 9.8e-09 64.7 41 70.7
TPR.G36214 Trifolium pratense HOM05D004341 ORTHO05D005075 6.4e-08 62.0 37 75.7
Solyc05g016715.1 Solanum lycopersicum HOM05D001240 ORTHO05D037679 7.0e-07 58.5 104 47.1
BcaB03g11666 Brassica carinata HOM05D004341 ORTHO05D005075 9.2e-07 58.2 41 73.2
arahy.Tifrunner.gnm1.ann1.W2JFNW Arachis hypogaea HOM05D004341 ORTHO05D005075 7.8e-06 55.1 34 76.5


User provided reference genes

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