Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 6.1e-111 404.1 191 100.0
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 9.5e-88 327.0 189 80.4
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 1.2e-85 320.1 187 77.5
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 2.9e-84 315.5 190 78.9
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 8.4e-84 313.9 187 75.9
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 1.4e-83 313.2 190 77.4
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 9.2e-83 310.5 190 75.8
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 2.7e-82 308.9 188 78.7
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 2.7e-82 308.9 191 74.9
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 4.6e-82 308.1 187 75.4
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 4.6e-82 308.1 190 74.2
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 7.8e-82 307.4 191 75.9
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.3e-81 306.6 192 74.5
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 1.3e-81 306.6 191 73.8
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 1.3e-81 306.6 188 76.6
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 1.7e-81 306.2 188 76.1
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 3.9e-81 305.1 189 75.1
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 3.9e-81 305.1 189 74.6
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 8.6e-81 303.9 187 74.9
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.1e-80 303.5 192 74.5
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 4.3e-80 301.6 189 73.5
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 9.6e-80 300.4 192 74.0
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 9.6e-80 300.4 192 74.0
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 9.6e-80 300.4 189 73.5
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 1.6e-79 299.7 191 72.8
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 1.6e-79 299.7 191 73.8
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 2.1e-79 299.3 189 70.9
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 8.1e-79 297.4 185 74.6
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 8.1e-79 297.4 191 74.3
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 1.4e-78 296.6 185 73.5
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 2.4e-78 295.8 185 72.4
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 3.1e-78 295.4 191 71.2
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 3.1e-78 295.4 187 73.8
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 4.0e-78 295.0 192 73.4
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 5.2e-78 294.7 191 70.2
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 8.9e-78 293.9 191 72.8
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 2.0e-77 292.7 192 72.9
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 2.6e-77 292.4 191 73.3
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 3.4e-77 292.0 191 72.3
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 4.4e-77 291.6 191 70.7
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 7.6e-77 290.8 191 69.6
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 7.6e-77 290.8 191 71.2
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 7.6e-77 290.8 191 72.3
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.7e-76 289.7 188 71.8
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 2.2e-76 289.3 192 69.8
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 2.2e-76 289.3 192 71.9
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 2.9e-76 288.9 192 69.8
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 2.9e-76 288.9 207 68.6
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 3.8e-76 288.5 191 71.2
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 4.9e-76 288.1 191 71.7
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 6.4e-76 287.7 186 71.0
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 1.4e-75 286.6 191 72.3
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 1.9e-75 286.2 190 70.5
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 5.4e-75 284.6 191 69.1
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 7.1e-75 284.3 191 69.1
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 9.3e-75 283.9 192 71.4
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 1.6e-74 283.1 190 68.4
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 2.7e-74 282.3 187 69.5
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 4.6e-74 281.6 188 68.6
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 4.6e-74 281.6 188 68.6
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 4.6e-74 281.6 190 68.4
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 6.0e-74 281.2 192 70.8
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 7.8e-74 280.8 192 71.4
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 1.3e-73 280.0 192 70.8
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 2.3e-73 279.3 184 71.2
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 5.1e-73 278.1 191 68.1
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 6.6e-73 277.7 191 70.7
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 3.3e-72 275.4 192 69.3
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 3.3e-72 275.4 188 67.6
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 3.3e-72 275.4 188 67.6
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 4.3e-72 275.0 192 68.8
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 5.6e-72 274.6 192 68.8
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 5.6e-72 274.6 189 66.7
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 7.3e-72 274.2 190 67.9
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 7.3e-72 274.2 191 66.5
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 9.6e-72 273.9 188 67.6
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 1.3e-71 273.5 192 68.8
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 1.6e-71 273.1 226 60.6
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 1.6e-71 273.1 191 66.5
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 1.6e-71 273.1 188 68.6
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 1.6e-71 273.1 191 67.0
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 2.1e-71 272.7 192 66.1
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 2.1e-71 272.7 191 68.1
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 2.8e-71 272.3 190 68.4
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 3.6e-71 271.9 192 68.2
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 3.6e-71 271.9 192 68.2
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 4.8e-71 271.6 186 66.1
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.4e-70 270.0 190 66.3
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 1.8e-70 269.6 191 68.1
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 1.5e-69 266.5 222 60.4
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 3.4e-69 265.4 190 65.8
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 9.9e-69 263.8 186 65.1
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 3.8e-68 261.9 187 65.2
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 1.6e-66 256.5 190 65.3
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 2.1e-66 256.1 191 63.4
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 3.5e-66 255.4 187 63.1
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 3.0e-65 252.3 185 62.7
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 6.7e-65 251.1 191 66.0
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 8.7e-65 250.8 184 65.2
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.5e-64 250.0 191 61.3
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 2.1e-63 246.1 187 61.5
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 4.8e-63 245.0 150 76.7
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 4.0e-62 241.9 188 61.2
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.4e-59 233.4 186 59.1
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 1.4e-59 233.4 175 64.6
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 5.5e-59 231.5 186 59.1
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 1.6e-58 229.9 187 58.3
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 2.7e-58 229.2 187 57.8
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 3.5e-58 228.8 191 58.6
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 7.9e-58 227.6 187 57.8
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 1.3e-57 226.9 148 70.9
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 8.7e-57 224.2 180 61.7
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.5e-56 222.6 187 57.8
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 1.8e-54 216.5 186 56.5
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 1.8e-54 216.5 187 56.7
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.5e-53 213.4 185 55.7
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 7.6e-53 211.1 188 52.7
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 5.5e-51 204.9 184 56.5
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 8.7e-49 197.6 133 66.9
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 1.8e-38 163.3 112 65.2
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 1.7e-31 140.2 82 80.5
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.8e-31 139.4 84 71.4
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 3.1e-30 136.0 110 57.3
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 6.1e-26 121.7 98 60.2
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.1e-18 96.7 116 45.7
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 2.3e-17 93.2 95 50.5
PRCOL_00002298 Prasinoderma coloniale HOM05D006185 ORTHO05D007572 2.3e-09 66.6 193 30.1
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 1.5e-08 63.9 78 41.0


User provided reference genes

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