Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061642.1 Olea europaea HOM05D002077 ORTHO05D000818 1.1e-25 119.0 52 100.0
Oeu021781.1 Olea europaea HOM05D002077 ORTHO05D000818 2.9e-15 84.3 58 69.0
GSVIVG01010544001 Vitis vinifera HOM05D002077 ORTHO05D000818 1.4e-12 75.5 55 63.6
Lalb_Chr06g0161071 Lupinus albus HOM05D002077 ORTHO05D000818 1.8e-12 75.1 55 60.0
Lj5g0027705 Lotus japonicus HOM05D002077 ORTHO05D000818 3.0e-12 74.3 55 58.2
Glyma.20G157500 Glycine max HOM05D002077 ORTHO05D000818 4.0e-12 73.9 55 58.2
Prupe.2G293200 Prunus persica HOM05D002077 ORTHO05D000818 5.2e-12 73.6 55 58.2
TWI14G1216 Tripterygium wilfordii HOM05D002077 ORTHO05D000818 5.2e-12 73.6 55 56.4
VMungo0720G0161 Vigna mungo HOM05D002077 ORTHO05D000818 6.8e-12 73.2 56 57.1
Actinidia34102 Actinidia chinensis HOM05D002077 ORTHO05D000818 8.8e-12 72.8 55 61.8
vmacro06694 Vaccinium macrocarpon HOM05D002077 ORTHO05D000818 8.8e-12 72.8 55 63.6
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 1.2e-11 72.4 55 58.2
Phvul.007G069000 Phaseolus vulgaris HOM05D002077 ORTHO05D000818 1.2e-11 72.4 55 56.4
Atru.chr1.476 Acer truncatum HOM05D002077 ORTHO05D000818 1.5e-11 72.0 55 56.4
Ciclev10005501m.g Citrus clementina HOM05D002077 ORTHO05D000818 1.5e-11 72.0 55 58.2
Eucgr.A02798 Eucalyptus grandis HOM05D002077 ORTHO05D000818 1.5e-11 72.0 55 56.4
RcHm_v2.0_Chr1g0377111 Rosa chinensis HOM05D002077 ORTHO05D000818 4.4e-11 70.5 55 56.4
TPR.G14327 Trifolium pratense HOM05D002077 ORTHO05D000818 4.4e-11 70.5 55 54.5
FvH4_7g29350 Fragaria vesca HOM05D002077 ORTHO05D000818 5.7e-11 70.1 55 56.4
FAN06G1288 Fragaria x ananassa HOM05D002077 ORTHO05D006729 5.7e-11 70.1 55 56.4
FAN06G1718 Fragaria x ananassa HOM05D002077 ORTHO05D006729 5.7e-11 70.1 55 56.4
Medtr1g100697 Medicago truncatula HOM05D002077 ORTHO05D000818 5.7e-11 70.1 55 56.4
Cpa.g.sc107.40 Carica papaya HOM05D002077 ORTHO05D000818 1.3e-10 68.9 55 58.2
Cfa008309 Carpinus fangiana HOM05D002077 ORTHO05D000818 1.3e-10 68.9 55 56.4
TAR636G1697 Trochodendron aralioides HOM05D002077 ORTHO05D000818 1.3e-10 68.9 55 58.2
arahy.Tifrunner.gnm1.ann1.6H6H67 Arachis hypogaea HOM05D002077 ORTHO05D000818 1.7e-10 68.6 55 54.5
arahy.Tifrunner.gnm1.ann1.KCRD8X Arachis hypogaea HOM05D002077 ORTHO05D000818 1.7e-10 68.6 55 54.5
Glyma.10G236900 Glycine max HOM05D002077 ORTHO05D000818 1.7e-10 68.6 55 58.2
Hma1.2p1_3140F.1_g333050 Hydrangea macrophylla HOM05D002077 ORTHO05D000818 1.7e-10 68.6 55 56.4
Dinv35206 Davidia involucrata HOM05D002077 ORTHO05D000818 2.2e-10 68.2 55 56.4
COL.COLO4_14296 Corchorus olitorius HOM05D002077 ORTHO05D000818 2.8e-10 67.8 55 54.5
Haze_13726 Corylus avellana HOM05D002077 ORTHO05D000818 2.8e-10 67.8 55 54.5
CiPaw.03G105400 Carya illinoinensis HOM05D002077 ORTHO05D000818 3.7e-10 67.4 55 58.2
Cc02_g03120 Coffea canephora HOM05D002077 ORTHO05D000818 3.7e-10 67.4 55 56.4
THA.LOC104824394 Tarenaya hassleriana HOM05D002077 ORTHO05D000818 3.7e-10 67.4 54 51.9
Manes.06G146400 Manihot esculenta HOM05D002077 ORTHO05D000818 4.8e-10 67.0 55 56.4
Ca_10779_v3 Cicer arietinum L. HOM05D002077 ORTHO05D000818 6.3e-10 66.6 55 52.7
Gohir.A09G041000 Gossypium hirsutum HOM05D002077 ORTHO05D000818 6.3e-10 66.6 55 52.7
Psat6g199880 Pisum sativum HOM05D002077 ORTHO05D000818 6.3e-10 66.6 55 54.5
ECA232G3548 Erigeron canadensis HOM05D002077 ORTHO05D000818 8.3e-10 66.2 55 52.7
ECA238G3926 Erigeron canadensis HOM05D002077 ORTHO05D000818 8.3e-10 66.2 55 56.4
FAN03G1828 Fragaria x ananassa HOM05D002077 ORTHO05D006729 8.3e-10 66.2 55 54.5
Gohir.D09G041900 Gossypium hirsutum HOM05D002077 ORTHO05D000818 8.3e-10 66.2 55 52.7
Gorai.006G048100 Gossypium raimondii HOM05D002077 ORTHO05D000818 8.3e-10 66.2 55 52.7
Lsat_1_v5_gn_2_131821 Lactuca sativa HOM05D002077 ORTHO05D000818 8.3e-10 66.2 46 65.2
Lj8A25T67 Lonicera japonica HOM05D002077 ORTHO05D000818 8.3e-10 66.2 55 56.4
Nitab4.5_0000716g0180 Nicotiana tabacum HOM05D002077 ORTHO05D000818 8.3e-10 66.2 55 54.5
Duzib205G0590 Durio zibethinus HOM05D002077 ORTHO05D000818 1.1e-09 65.9 55 52.7
Dinv28453 Davidia involucrata HOM05D002077 ORTHO05D000818 1.8e-09 65.1 55 58.2
Rhsim03G0179600 Rhododendron simsii HOM05D002077 ORTHO05D000818 1.8e-09 65.1 55 56.4
Thecc.03G175300 Theobroma cacao HOM05D002077 ORTHO05D000818 2.4e-09 64.7 55 54.5
QL09p014520 Quercus lobata HOM05D002077 ORTHO05D000818 3.1e-09 64.3 55 54.5
Hma1.2p1_2482F.1_g323020 Hydrangea macrophylla HOM05D002077 ORTHO05D000818 4.1e-09 63.9 55 54.5
Nitab4.5_0003365g0050 Nicotiana tabacum HOM05D002077 ORTHO05D000818 4.1e-09 63.9 55 52.7
Eucgr.A02799 Eucalyptus grandis HOM05D002077 ORTHO05D000818 5.4e-09 63.5 55 52.7
HanXRQChr15g0495591 Helianthus annuus HOM05D002077 ORTHO05D000818 5.4e-09 63.5 55 54.5
Potri.015G139700 Populus trichocarpa HOM05D002077 ORTHO05D000818 7.0e-09 63.2 55 50.9
PGSC0003DMG402014331 Solanum tuberosum HOM05D002077 ORTHO05D000818 7.0e-09 63.2 55 50.9
Hma1.2p1_2094F.1_g313920 Hydrangea macrophylla HOM05D002077 ORTHO05D000818 9.1e-09 62.8 55 54.5
Potri.012G137700 Populus trichocarpa HOM05D002077 ORTHO05D000818 1.2e-08 62.4 55 52.7
Sp5g13170 Schrenkiella parvula HOM05D002077 ORTHO05D000818 1.2e-08 62.4 48 54.2
AL5G28390 Arabidopsis lyrata HOM05D002077 ORTHO05D000818 1.6e-08 62.0 48 54.2
AT3G48880 Arabidopsis thaliana HOM05D002077 ORTHO05D000818 1.6e-08 62.0 48 54.2
BcaB05g22980 Brassica carinata HOM05D002077 ORTHO05D000818 1.6e-08 62.0 46 58.7
Carub.0005s1505 Capsella rubella HOM05D002077 ORTHO05D000818 1.6e-08 62.0 48 54.2
CARHR157690 Cardamine hirsuta HOM05D002077 ORTHO05D000818 1.6e-08 62.0 48 54.2
Thhalv10010519m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 1.6e-08 62.0 48 54.2
Aa31LG4G17390 Aethionema arabicum HOM05D002077 ORTHO05D000818 2.0e-08 61.6 51 47.1
Sabra15G0150400 Salix brachista HOM05D002077 ORTHO05D000818 2.0e-08 61.6 55 49.1
Medtr1g100707 Medicago truncatula HOM05D002077 ORTHO05D000818 2.7e-08 61.2 55 50.9
PSO063G0361 Papaver somniferum HOM05D002077 ORTHO05D000818 2.7e-08 61.2 55 49.1
PSO782G4919 Papaver somniferum HOM05D002077 ORTHO05D000818 2.7e-08 61.2 55 49.1
Solyc03g025920.4 Solanum lycopersicum HOM05D002077 ORTHO05D000818 3.5e-08 60.8 55 50.9
Sopen03g004730 Solanum pennellii HOM05D002077 ORTHO05D000818 3.5e-08 60.8 55 50.9
PGSC0003DMG403014333 Solanum tuberosum HOM05D002077 ORTHO05D000818 3.5e-08 60.8 55 50.9
SGA_v2.0_scaffold10G05344 Striga asiatica HOM05D002077 ORTHO05D000818 3.5e-08 60.8 56 51.8
Nn1g01424 Nelumbo nucifera HOM05D002077 ORTHO05D000818 4.5e-08 60.5 55 49.1
SalBow2G3420 Salvia bowleyana HOM05D002077 ORTHO05D000818 4.5e-08 60.5 55 49.1
PGSC0003DMG401014333 Solanum tuberosum HOM05D002077 ORTHO05D000818 4.5e-08 60.5 55 50.9
CAN.G913.3 Capsicum annuum HOM05D002077 ORTHO05D000818 5.9e-08 60.1 55 50.9
Peaxi162Scf00915g00025 Petunia axillaris HOM05D002077 ORTHO05D000818 5.9e-08 60.1 55 49.1
BcaC09g49912 Brassica carinata HOM05D002077 ORTHO05D000818 7.7e-08 59.7 46 56.5
A01p25170 Brassica napus HOM05D002077 ORTHO05D000818 7.7e-08 59.7 46 56.5
C01p31370 Brassica napus HOM05D002077 ORTHO05D000818 7.7e-08 59.7 46 56.5
BolC1t03074H Brassica oleracea HOM05D002077 ORTHO05D000818 7.7e-08 59.7 46 56.5
BraA01t02425Z Brassica rapa HOM05D002077 ORTHO05D000818 7.7e-08 59.7 46 56.5
CSS0043143 Camellia sinensis var. sinensis HOM05D002077 ORTHO05D000818 1.0e-07 59.3 55 49.1
Migut.F01126 Erythranthe guttata HOM05D002077 ORTHO05D000818 1.3e-07 58.9 55 49.1
C08p23850 Brassica napus HOM05D002077 ORTHO05D000818 1.7e-07 58.5 44 56.8
PGSC0003DMG401014331 Solanum tuberosum HOM05D002077 ORTHO05D000818 2.2e-07 58.2 55 47.3
MBI18_g44743_MAGBIO Magnolia biondii HOM05D002077 ORTHO05D000818 3.8e-07 57.4 55 45.5
BcaC07g39363 Brassica carinata HOM05D002077 ORTHO05D000818 6.5e-07 56.6 44 54.5
HanXRQChr07g0207061 Helianthus annuus HOM05D002077 ORTHO05D000818 6.5e-07 56.6 55 52.7
BolC8t50011H Brassica oleracea HOM05D002077 ORTHO05D000818 1.1e-06 55.8 44 52.3
Aqoxy5G03957 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 2.5e-06 54.7 55 50.9
Aa31LG11G3080 Aethionema arabicum HOM05D002077 ORTHO05D000818 3.2e-06 54.3 54 46.3
Solyc03g025930.4 Solanum lycopersicum HOM05D002077 ORTHO05D000818 3.2e-06 54.3 51 49.0
Solyc03g062810.1 Solanum lycopersicum HOM05D002077 ORTHO05D000818 3.2e-06 54.3 54 40.7
Sopen03g004750 Solanum pennellii HOM05D002077 ORTHO05D000818 3.2e-06 54.3 51 49.0
Solyc03g025940.3 Solanum lycopersicum HOM05D002077 ORTHO05D000818 4.2e-06 53.9 55 45.5
PGSC0003DMG400014329 Solanum tuberosum HOM05D002077 ORTHO05D000818 5.5e-06 53.5 55 45.5
PGSC0003DMG400030222 Solanum tuberosum HOM05D002077 ORTHO05D000818 5.5e-06 53.5 55 43.6


User provided reference genes

Program Settings