Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061252.3 Olea europaea HOM05D004632 ORTHO05D005556 4.0e-204 715.3 607 100.0
Dinv34967 Davidia involucrata HOM05D004632 ORTHO05D005556 1.9e-145 520.4 708 69.2
CSS0008139 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 4.0e-140 502.7 704 67.9
GSVIVG01035887001 Vitis vinifera HOM05D004632 ORTHO05D005556 2.1e-136 490.3 711 66.7
Actinidia22297 Actinidia chinensis HOM05D004632 ORTHO05D005556 3.3e-134 483.0 706 66.9
Rhsim02G0214000 Rhododendron simsii HOM05D004632 ORTHO05D005556 1.3e-133 481.1 705 67.0
MSTRG.9370 Avicennia marina HOM05D004632 ORTHO05D005556 1.7e-130 470.7 707 65.8
PSO782G2171 Papaver somniferum HOM05D004632 ORTHO05D005556 8.4e-130 468.4 703 64.6
PSO063G4867 Papaver somniferum HOM05D004632 ORTHO05D005556 1.4e-129 467.6 706 64.4
Cc09_g08590 Coffea canephora HOM05D004632 ORTHO05D005556 2.5e-129 466.8 709 66.3
Nn8g39852 Nelumbo nucifera HOM05D004632 ORTHO05D005556 5.5e-129 465.7 703 65.3
Migut.N00603 Erythranthe guttata HOM05D004632 ORTHO05D005556 1.2e-128 464.5 705 66.2
CAN.G199.61 Capsicum annuum HOM05D004632 ORTHO05D005556 6.0e-128 462.2 710 65.1
Prupe.1G392800 Prunus persica HOM05D004632 ORTHO05D005556 1.6e-125 454.1 709 64.3
CsaV3_4G036640 Cucumis sativus L. HOM05D004632 ORTHO05D005556 2.8e-125 453.4 708 64.3
Peaxi162Scf00430g00519 Petunia axillaris HOM05D004632 ORTHO05D005556 3.7e-125 453.0 708 64.7
MELO3C016968.2 Cucumis melo HOM05D004632 ORTHO05D005556 4.8e-125 452.6 708 64.4
Solyc06g065700.3 Solanum lycopersicum HOM05D004632 ORTHO05D005556 4.8e-125 452.6 714 63.4
Sopen06g024220 Solanum pennellii HOM05D004632 ORTHO05D005556 1.1e-124 451.4 715 63.5
Potri.006G263400 Populus trichocarpa HOM05D004632 ORTHO05D005556 3.1e-124 449.9 710 63.9
CiPaw.07G229300 Carya illinoinensis HOM05D004632 ORTHO05D005556 9.0e-124 448.4 714 64.1
Potri.018G020200 Populus trichocarpa HOM05D004632 ORTHO05D005556 2.6e-123 446.8 710 63.4
Aqoxy7G03810 Aquilegia oxysepala HOM05D004632 ORTHO05D005556 4.5e-123 446.0 702 64.2
Sed0004025 Sechium edule HOM05D004632 ORTHO05D005556 4.5e-123 446.0 706 64.3
EL10Ac1g00704 Beta vulgaris HOM05D004632 ORTHO05D005556 2.9e-122 443.4 715 61.7
DCAR_015265 Daucus carota HOM05D004632 ORTHO05D005556 3.8e-122 443.0 707 63.9
HanXRQChr03g0084861 Helianthus annuus HOM05D004632 ORTHO05D005556 3.8e-122 443.0 703 64.3
Manes.16G128700 Manihot esculenta HOM05D004632 ORTHO05D005556 6.5e-122 442.2 708 63.8
RcHm_v2.0_Chr6g0299541 Rosa chinensis HOM05D004632 ORTHO05D005556 8.4e-122 441.8 705 64.3
MSTRG.4644 Avicennia marina HOM05D004632 ORTHO05D005556 1.2e-120 438.0 696 65.5
Psat5g032640 Pisum sativum HOM05D004632 ORTHO05D005556 1.6e-120 437.6 705 63.7
Ciclev10007613m.g Citrus clementina HOM05D004632 ORTHO05D005556 2.7e-120 436.8 711 63.7
VMungo1309G0882 Vigna mungo HOM05D004632 ORTHO05D005556 2.7e-120 436.8 707 63.5
TPR.G1835 Trifolium pratense HOM05D004632 ORTHO05D005556 7.9e-120 435.3 708 63.3
MBI15_g05236_MAGBIO Magnolia biondii HOM05D004632 ORTHO05D005556 1.3e-119 434.5 492 51.8
SGA_v2.0_scaffold40G15680 Striga asiatica HOM05D004632 ORTHO05D005556 1.3e-119 434.5 742 61.7
Ca_15774_v3 Cicer arietinum L. HOM05D004632 ORTHO05D005556 1.8e-119 434.1 710 64.1
ECA240G3507 Erigeron canadensis HOM05D004632 ORTHO05D005556 3.9e-119 433.0 702 63.8
Phvul.009G087600 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 3.9e-119 433.0 708 63.3
Sabra06G0205900 Salix brachista HOM05D004632 ORTHO05D005556 3.9e-119 433.0 706 63.3
Lj1g0022186 Lotus japonicus HOM05D004632 ORTHO05D005556 5.1e-119 432.6 703 63.9
Medtr3g106080 Medicago truncatula HOM05D004632 ORTHO05D005556 6.7e-119 432.2 709 63.5
Atru.chr7.2537 Acer truncatum HOM05D004632 ORTHO05D005556 8.7e-119 431.8 716 62.8
Lalb_Chr23g0268241 Lupinus albus HOM05D004632 ORTHO05D005556 1.9e-118 430.6 703 63.3
ClCG05G016370 Citrullus lanatus HOM05D004632 ORTHO05D005556 5.7e-118 429.1 715 63.2
MD00G1143300 Malus domestica HOM05D004632 ORTHO05D005556 7.4e-118 428.7 498 50.8
arahy.Tifrunner.gnm1.ann1.8PBG0P Arachis hypogaea HOM05D004632 ORTHO05D005556 1.3e-117 427.9 703 63.4
Duzib168G2284 Durio zibethinus HOM05D004632 ORTHO05D005556 1.4e-116 424.5 703 63.2
TWI32G0830 Tripterygium wilfordii HOM05D004632 ORTHO05D005556 2.4e-116 423.7 711 62.3
arahy.Tifrunner.gnm1.ann1.21LKMJ Arachis hypogaea HOM05D004632 ORTHO05D005556 6.9e-116 422.2 492 50.0
Glyma.06G062300 Glycine max HOM05D004632 ORTHO05D005556 6.9e-116 422.2 704 62.6
ATR0739G094 Amborella trichopoda HOM05D004632 ORTHO05D005556 2.0e-115 420.6 701 62.2
Glyma.04G061600 Glycine max HOM05D004632 ORTHO05D005556 2.0e-115 420.6 705 62.3
Lj7A732T26 Lonicera japonica HOM05D004632 ORTHO05D005556 5.9e-115 419.1 690 59.7
PGR042G1415 Punica granatum HOM05D004632 ORTHO05D005556 1.3e-114 417.9 711 62.0
Ah.05g177560 Amaranthus hybridus HOM05D004632 ORTHO05D005556 2.2e-114 417.2 511 49.9
Eucgr.C02661 Eucalyptus grandis HOM05D004632 ORTHO05D005556 1.4e-113 414.5 726 61.2
FvH4_2g41020 Fragaria vesca HOM05D004632 ORTHO05D005556 1.4e-113 414.5 705 62.4
FAN20G0152 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.4e-113 414.5 719 61.2
HPP92_014401 Vanilla planifolia HOM05D004632 ORTHO05D005556 1.4e-113 414.5 700 63.1
FAN20G1191 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.9e-113 414.1 720 61.1
Lsat_1_v5_gn_6_77900 Lactuca sativa HOM05D004632 ORTHO05D005556 1.9e-113 414.1 713 62.4
Gohir.A07G031900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 4.2e-113 412.9 703 62.4
Cpa.g.sc127.22 Carica papaya HOM05D004632 ORTHO05D005556 2.1e-112 410.6 496 49.0
Lsat_1_v5_gn_7_4261 Lactuca sativa HOM05D004632 ORTHO05D005556 3.6e-112 409.8 711 59.1
BcaB04g19812 Brassica carinata HOM05D004632 ORTHO05D005556 4.6e-112 409.5 711 61.7
Gorai.001G037500 Gossypium raimondii HOM05D004632 ORTHO05D005556 6.1e-112 409.1 703 62.2
Gohir.D07G035600 Gossypium hirsutum HOM05D004632 ORTHO05D005556 1.8e-111 407.5 703 62.0
Sp2g22380 Schrenkiella parvula HOM05D004632 ORTHO05D005556 5.1e-111 406.0 709 62.1
A09p06280 Brassica napus HOM05D004632 ORTHO05D005556 1.3e-109 401.4 709 61.8
FAN27G1200 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.3e-109 401.4 494 49.0
BraA09t36273Z Brassica rapa HOM05D004632 ORTHO05D005556 3.7e-109 399.8 709 61.6
THA.LOC104814991 Tarenaya hassleriana HOM05D004632 ORTHO05D005556 4.8e-109 399.4 716 61.2
BolC9t53613H Brassica oleracea HOM05D004632 ORTHO05D005556 3.1e-108 396.7 709 61.5
Os06g0649500 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 4.1e-108 396.4 490 47.8
AT5G25150 Arabidopsis thaliana HOM05D004632 ORTHO05D005556 1.5e-107 394.4 710 61.0
BcaC04g23574 Brassica carinata HOM05D004632 ORTHO05D005556 7.7e-107 392.1 709 61.2
Thhalv10003767m.g Eutrema salsugineum HOM05D004632 ORTHO05D005556 7.7e-107 392.1 710 61.1
C09p06950 Brassica napus HOM05D004632 ORTHO05D005556 1.3e-106 391.3 709 61.2
Carub.0006s2297 Capsella rubella HOM05D004632 ORTHO05D005556 6.5e-106 389.0 709 61.6
Nitab4.5_0007182g0050 Nicotiana tabacum HOM05D004632 ORTHO05D005556 1.4e-105 387.9 490 49.4
Gohir.A05G058900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 2.7e-104 383.6 703 60.9
BolC2t12041H Brassica oleracea HOM05D004632 ORTHO05D005556 4.7e-104 382.9 706 60.1
A02p39940 Brassica napus HOM05D004632 ORTHO05D005556 2.3e-103 380.6 708 60.2
CDE05G3472 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 2.3e-103 380.6 489 45.4
BraA02t08956Z Brassica rapa HOM05D004632 ORTHO05D005556 6.7e-103 379.0 710 60.0
AUR62013801 Chenopodium quinoa HOM05D004632 ORTHO05D005556 3.7e-101 373.2 629 61.4
CSS0046974 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 1.8e-100 370.9 652 62.0
Nitab4.5_0003976g0020 Nicotiana tabacum HOM05D004632 ORTHO05D005556 3.1e-100 370.2 762 53.7
Haze_21427 Corylus avellana HOM05D004632 ORTHO05D005556 5.3e-100 369.4 481 48.2
C02p59830 Brassica napus HOM05D004632 ORTHO05D005556 7.0e-100 369.0 706 59.2
Aa31LG11G4400 Aethionema arabicum HOM05D004632 ORTHO05D005556 1.5e-99 367.9 500 45.6
Phvul.001G042300 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 2.0e-99 367.5 703 59.6
Glyma.17G222200 Glycine max HOM05D004632 ORTHO05D005556 2.2e-98 364.0 703 59.0
CARHR188340 Cardamine hirsuta HOM05D004632 ORTHO05D005556 2.5e-97 360.5 499 45.5
VMungo0647G2075 Vigna mungo HOM05D004632 ORTHO05D005556 1.0e-95 355.1 703 58.3
SalBow1G2567 Salvia bowleyana HOM05D004632 ORTHO05D005556 2.8e-93 347.1 422 50.5
AUR62023356 Chenopodium quinoa HOM05D004632 ORTHO05D005556 4.8e-93 346.3 707 54.9
Hund27424 Selenicereus undatus HOM05D004632 ORTHO05D005556 1.6e-91 341.3 624 38.8
AL6G36810 Arabidopsis lyrata HOM05D004632 ORTHO05D005556 1.0e-90 338.6 710 58.3
vmacro11252 Vaccinium macrocarpon HOM05D004632 ORTHO05D005556 3.8e-90 336.7 638 47.0
Oeu013659.1 Olea europaea HOM05D004632 ORTHO05D005556 1.4e-87 328.2 231 76.6
Thecc.09G016800 Theobroma cacao HOM05D004632 ORTHO05D005556 1.8e-87 327.8 607 63.4
TAR626G1191 Trochodendron aralioides HOM05D004632 ORTHO05D005556 1.5e-86 324.7 600 64.3
BcaB07g29936 Brassica carinata HOM05D004632 ORTHO05D005556 8.3e-85 318.9 489 41.3
Mapoly0009s0169 Marchantia polymorpha HOM05D004632 ORTHO05D005556 3.8e-82 310.1 505 38.6
BcaC03g17924 Brassica carinata HOM05D004632 ORTHO05D005556 6.8e-79 299.3 708 55.8
Zm00001eb388650 Zea mays HOM05D004632 ORTHO05D005556 1.2e-78 298.5 603 61.4
Pp3c12_23330 Physcomitrium patens HOM05D004632 ORTHO05D005556 9.1e-76 288.9 495 38.4
Gohir.D05G060932 Gossypium hirsutum HOM05D004632 ORTHO05D005556 1.5e-73 281.6 584 50.7
TAR625G0176 Trochodendron aralioides HOM05D004632 ORTHO05D005556 5.6e-65 253.1 374 43.9
SMO118G0104 Selaginella moellendorffii HOM05D004632 ORTHO05D005556 1.5e-62 245.0 430 36.5
Zm00001eb259920 Zea mays HOM05D004632 ORTHO05D005556 7.8e-59 232.6 231 55.8
MD15G1039100 Malus domestica HOM05D004632 ORTHO05D005556 2.5e-57 227.6 319 45.5
SEGI_13945 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 1.4e-55 221.9 179 65.4
CSS0042581 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 4.4e-54 216.9 322 45.0
Actinidia13189 Actinidia chinensis HOM05D004632 ORTHO05D005556 6.8e-47 193.0 614 54.6
MD15G1039000 Malus domestica HOM05D004632 ORTHO05D005556 2.9e-45 187.6 179 57.5
VMungo1309G1582 Vigna mungo HOM05D004632 ORTHO05D005556 3.5e-43 180.6 242 45.0
CBR_g41144 Chara braunii HOM05D004632 ORTHO05D005556 4.3e-41 173.7 164 51.2
CDE05G3588 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 1.7e-34 151.8 167 50.3
Hma1.2p1_0059F.1_g032640 Hydrangea macrophylla HOM05D004632 ORTHO05D005556 1.6e-32 145.2 290 90.3
PRCOL_00000651 Prasinoderma coloniale HOM05D004632 ORTHO05D005556 3.6e-32 144.1 504 26.0
SEGI_28232 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 7.6e-30 136.3 176 44.9
Actinidia10511 Actinidia chinensis HOM05D004632 ORTHO05D005556 7.1e-28 129.8 180 45.0
MCO11G306 Micromonas commoda HOM05D004632 ORTHO05D005556 7.1e-28 129.8 512 25.4
AagrBONN_evm.TU.Sc2ySwM_228.3176 Anthoceros agrestis HOM05D003428 ORTHO05D004131 4.6e-27 127.1 188 39.9
Sed0017212 Sechium edule HOM05D004632 ORTHO05D005556 3.0e-26 124.4 511 44.6
COL.COLO4_18941 Corchorus olitorius HOM05D004632 ORTHO05D005556 8.7e-26 122.9 276 35.9
CBR_g39739 Chara braunii HOM05D004632 ORTHO05D005556 1.6e-24 118.6 265 34.3
Dinv40981 Davidia involucrata HOM05D004632 ORTHO05D005556 1.4e-23 115.5 180 43.3
MCO11G293 Micromonas commoda HOM05D004632 ORTHO05D005556 1.2e-22 112.5 562 23.3
Actinidia10512 Actinidia chinensis HOM05D004632 ORTHO05D005556 1.9e-20 105.1 82 65.9
Glyma.14G103500 Glycine max HOM05D004632 ORTHO05D005556 1.2e-19 102.4 110 51.8
PSO541G0014 Papaver somniferum HOM05D004632 ORTHO05D005556 4.9e-13 80.5 43 88.4
SEGI_29407 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 2.5e-12 78.2 67 52.2
MD15G1038900 Malus domestica HOM05D004632 ORTHO05D005556 7.9e-11 73.2 52 67.3
FAN15G3250 Fragaria x ananassa HOM05D004632 ORTHO05D005556 2.3e-10 71.6 50 68.0
CDE05G1210 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 1.5e-09 68.9 38 84.2
Glyma.14G103600 Glycine max HOM05D004632 ORTHO05D005556 2.5e-09 68.2 48 75.0
Cfa022837 Carpinus fangiana HOM05D004632 ORTHO05D005556 7.4e-09 66.6 485 20.4
Sabra18G0022500 Salix brachista HOM05D004632 ORTHO05D005556 8.2e-08 63.2 220 30.0
Os07g0205200 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 2.4e-07 61.6 84 44.0
SEGI_21073 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 4.1e-07 60.8 50 68.0
Cre12.g526950 Chlamydomonas reinhardtii HOM05D004632 ORTHO05D005556 2.0e-06 58.5 209 25.4
Haze_26425 Corylus avellana HOM05D004632 ORTHO05D005556 4.5e-06 57.4 171 26.9
Manes.03G009801 Manihot esculenta HOM05D004632 ORTHO05D005556 1.0e-05 56.2 158 36.1


User provided reference genes

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