Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060743.1 Olea europaea HOM05D002005 ORTHO05D003757 0.0e+00 2075.8 1157 100.0
Oeu060745.1 Olea europaea HOM05D002005 ORTHO05D003757 0.0e+00 2075.8 1157 100.0
Oeu023030.1 Olea europaea HOM05D002005 ORTHO05D003757 9.6e-175 618.6 1182 41.8
Oeu044220.1 Olea europaea HOM05D002005 ORTHO05D003757 2.4e-157 560.8 1330 37.9
MSTRG.6275 Avicennia marina HOM05D002005 ORTHO05D003757 1.7e-150 538.1 1386 36.1
MSTRG.19759 Avicennia marina HOM05D002005 ORTHO05D003757 2.7e-145 520.8 1289 37.2
Dinv37045 Davidia involucrata HOM05D002005 ORTHO05D003757 8.0e-137 492.7 1329 36.5
Cc00_g08730 Coffea canephora HOM05D002005 ORTHO05D003757 2.3e-112 411.4 1281 33.7
SalBow6G5301 Salvia bowleyana HOM05D002005 ORTHO05D003757 2.3e-99 368.2 1235 35.1
SalBow6G5969 Salvia bowleyana HOM05D002005 ORTHO05D003757 2.3e-99 368.2 1235 35.1
Actinidia37843 Actinidia chinensis HOM05D002005 ORTHO05D003757 2.6e-95 354.8 1333 30.9
MSTRG.10764 Avicennia marina HOM05D002005 ORTHO05D003757 4.9e-94 350.5 990 35.9
CAN.G128.110 Capsicum annuum HOM05D002005 ORTHO05D003757 1.8e-88 332.0 1137 32.0
Sopen10g031700 Solanum pennellii HOM05D002005 ORTHO05D003757 7.5e-87 326.6 1127 32.4
Solyc10g081200.1 Solanum lycopersicum HOM05D002005 ORTHO05D003757 1.7e-86 325.5 1121 32.6
PGSC0003DMG400028204 Solanum tuberosum HOM05D002005 ORTHO05D003757 3.2e-85 321.2 1178 31.2
RhsimUnG0023200 Rhododendron simsii HOM05D002005 ORTHO05D003757 1.0e-83 316.2 1247 30.0
CSS0037844 Camellia sinensis var. sinensis HOM05D002005 ORTHO05D003757 1.1e-80 306.2 1298 30.4
Peaxi162Scf00153g01023 Petunia axillaris HOM05D002005 ORTHO05D003757 1.4e-80 305.8 1238 32.2
GSVIVG01029896001 Vitis vinifera HOM05D002005 ORTHO05D003757 1.8e-80 305.4 1137 30.7
Nitab4.5_0000062g0420 Nicotiana tabacum HOM05D002005 ORTHO05D003757 4.3e-74 284.3 1150 31.7
Nitab4.5_0007999g0010 Nicotiana tabacum HOM05D002005 ORTHO05D003757 1.6e-68 265.8 684 35.7
Peaxi162Scf00003g05364 Petunia axillaris HOM05D002005 ORTHO05D003757 2.7e-68 265.0 599 38.4
Nitab4.5_0000123g0050 Nicotiana tabacum HOM05D002005 ORTHO05D003757 6.9e-64 250.4 662 34.7
TAR369G0234 Trochodendron aralioides HOM05D002005 ORTHO05D003757 5.8e-63 247.3 1293 28.4
Dinv14553 Davidia involucrata HOM05D002005 ORTHO05D003757 3.7e-57 228.0 368 44.3
TAR623G1062 Trochodendron aralioides HOM05D002005 ORTHO05D003757 4.8e-57 227.6 1229 28.4
Dinv14554 Davidia involucrata HOM05D002005 ORTHO05D003757 1.1e-56 226.5 809 32.0
PGSC0003DMG400019177 Solanum tuberosum HOM05D002005 ORTHO05D003757 2.6e-55 221.9 570 35.8
unitig_21.g20665 Utricularia gibba HOM05D002005 ORTHO05D003757 3.4e-55 221.5 844 32.9
Migut.N01846 Erythranthe guttata HOM05D002005 ORTHO05D003757 4.9e-54 217.6 918 31.4
Lj1P1075T62 Lonicera japonica HOM05D002005 ORTHO05D003757 2.1e-52 212.2 666 33.8
Nitab4.5_0003808g0050 Nicotiana tabacum HOM05D002005 ORTHO05D003757 2.1e-52 212.2 779 31.8
Prupe.7G025700 Prunus persica HOM05D002005 ORTHO05D003757 6.0e-52 210.7 554 35.6
Migut.J01577 Erythranthe guttata HOM05D002005 ORTHO05D003757 1.8e-51 209.1 1246 28.5
Duzib177G0589 Durio zibethinus HOM05D002005 ORTHO05D003757 6.7e-51 207.2 1285 27.3
QL07p015943 Quercus lobata HOM05D002005 ORTHO05D003757 8.7e-51 206.8 1282 27.9
SGA_v2.0_scaffold66G22332 Striga asiatica HOM05D002005 ORTHO05D003757 1.3e-49 203.0 1253 28.2
Lalb_Chr14g0365081 Lupinus albus HOM05D002005 ORTHO05D003757 1.4e-48 199.5 1246 26.2
MD12G1015000 Malus domestica HOM05D002005 ORTHO05D003757 1.8e-48 199.1 439 38.7
Solyc10g076650.3 Solanum lycopersicum HOM05D002005 ORTHO05D003757 2.4e-48 198.7 615 33.0
Sopen10g028680 Solanum pennellii HOM05D002005 ORTHO05D003757 2.9e-46 191.8 852 29.1
MD14G1012900 Malus domestica HOM05D002005 ORTHO05D003757 6.5e-46 190.7 562 32.9
Lj1g0005282 Lotus japonicus HOM05D002005 ORTHO05D003757 1.3e-43 183.0 1037 27.1
Sopen10g028260 Solanum pennellii HOM05D002005 ORTHO05D003757 1.8e-43 182.6 690 29.9
FAN28G0247 Fragaria x ananassa HOM05D002005 ORTHO05D003757 3.0e-43 181.8 621 30.6
Duzib106G2027 Durio zibethinus HOM05D002005 ORTHO05D003757 1.9e-42 179.1 1093 27.3
Haze_20366 Corylus avellana HOM05D002005 ORTHO05D003757 7.4e-42 177.2 1220 27.0
Cfa019886 Carpinus fangiana HOM05D002005 ORTHO05D003757 9.7e-42 176.8 1188 26.7
DCAR_020635 Daucus carota HOM05D002005 ORTHO05D003757 9.7e-42 176.8 1140 26.7
Glyma.03G004800 Glycine max HOM05D002005 ORTHO05D003757 1.3e-41 176.4 1162 25.6
Eucgr.A02165 Eucalyptus grandis HOM05D002005 ORTHO05D003757 1.6e-41 176.0 1209 27.2
FAN26G2169 Fragaria x ananassa HOM05D002005 ORTHO05D003757 4.8e-41 174.5 762 28.1
FvH4_1g29420 Fragaria vesca HOM05D002005 ORTHO05D003757 8.2e-41 173.7 622 30.2
Glyma.19G121300 Glycine max HOM05D002005 ORTHO05D003757 8.2e-41 173.7 1155 26.1
FAN19G0929 Fragaria x ananassa HOM05D002005 ORTHO05D003757 1.1e-40 173.3 622 30.5
Thecc.05G236600 Theobroma cacao HOM05D002005 ORTHO05D003757 1.4e-40 172.9 1073 27.3
Hma1.2p1_1291F.1_g273630 Hydrangea macrophylla HOM05D002005 ORTHO05D003757 2.0e-39 169.1 734 30.5
Duzib128G1593 Durio zibethinus HOM05D002005 ORTHO05D003757 2.6e-39 168.7 971 28.5
Solyc10g077000.3 Solanum lycopersicum HOM05D002005 ORTHO05D003757 4.5e-39 167.9 422 34.8
Gorai.013G197500 Gossypium raimondii HOM05D002005 ORTHO05D003757 7.7e-39 167.2 1126 27.3
Phvul.001G101800 Phaseolus vulgaris HOM05D002005 ORTHO05D003757 1.0e-38 166.8 1162 26.3
Ca_03430_v3 Cicer arietinum L. HOM05D002005 ORTHO05D003757 2.9e-38 165.2 1190 24.3
Gohir.D13G165200 Gossypium hirsutum HOM05D002005 ORTHO05D003757 3.8e-38 164.9 1126 27.4
TPR.G23643 Trifolium pratense HOM05D002005 ORTHO05D003757 1.1e-37 163.3 1156 26.6
Cpa.g.sc73.39 Carica papaya HOM05D002005 ORTHO05D003757 1.9e-37 162.5 1059 26.3
MD05G1057800 Malus domestica HOM05D002005 ORTHO05D003757 7.2e-37 160.6 547 28.9
RcHm_v2.0_Chr6g0267051 Rosa chinensis HOM05D002005 ORTHO05D003757 7.2e-37 160.6 563 30.0
TWI34G0003 Tripterygium wilfordii HOM05D002005 ORTHO05D003757 1.2e-36 159.8 1289 25.3
Prupe.8G087600 Prunus persica HOM05D002005 ORTHO05D003757 7.9e-36 157.1 1021 25.2
ECA236G4805 Erigeron canadensis HOM05D002005 ORTHO05D003757 1.4e-35 156.4 962 28.6
CANSAT78G2106 Cannabis sativa HOM05D002005 ORTHO05D003757 3.0e-35 155.2 1067 27.1
Atru.chr2.1605 Acer truncatum HOM05D002005 ORTHO05D003757 1.5e-34 152.9 733 28.9
Psat3g084320 Pisum sativum HOM05D002005 ORTHO05D003757 3.3e-34 151.8 1176 24.7
Gohir.A13G160000 Gossypium hirsutum HOM05D002005 ORTHO05D003757 5.7e-34 151.0 1140 26.2
Manes.08G155700 Manihot esculenta HOM05D002005 ORTHO05D003757 2.8e-33 148.7 569 33.0
arahy.Tifrunner.gnm1.ann1.QNMS29 Arachis hypogaea HOM05D002005 ORTHO05D003757 3.7e-33 148.3 859 27.7
arahy.Tifrunner.gnm1.ann1.M37KEN Arachis hypogaea HOM05D002005 ORTHO05D003757 4.8e-33 147.9 869 27.4
RcHm_v2.0_Chr3g0495491 Rosa chinensis HOM05D002005 ORTHO05D003757 3.4e-31 141.7 775 27.1
BolC9t58754H Brassica oleracea HOM05D002005 ORTHO05D003757 5.9e-31 141.0 1178 25.8
Sc22g0002340 Simmondsia chinensis HOM05D002005 ORTHO05D003757 5.9e-31 141.0 830 26.9
BraA10t44218Z Brassica rapa HOM05D002005 ORTHO05D003757 1.0e-30 140.2 1226 25.4
VMungo1383G0221 Vigna mungo HOM05D002005 ORTHO05D003757 1.0e-30 140.2 1172 25.3
Ciclev10030490m.g Citrus clementina HOM05D002005 ORTHO05D003757 1.3e-30 139.8 1043 26.3
TWI32G1337 Tripterygium wilfordii HOM05D002005 ORTHO05D003757 3.8e-30 138.3 959 26.2
BcaB08g36725 Brassica carinata HOM05D002005 ORTHO05D003757 8.5e-30 137.1 564 30.1
Gorai.013G114300 Gossypium raimondii HOM05D002005 ORTHO05D003757 1.4e-29 136.3 1137 25.8
Medtr7g087490 Medicago truncatula HOM05D002005 ORTHO05D003757 2.5e-29 135.6 1234 25.2
BcaC04g18741 Brassica carinata HOM05D002005 ORTHO05D003757 5.5e-29 134.4 1188 25.3
CiPaw.09G053000 Carya illinoinensis HOM05D002005 ORTHO05D003757 7.2e-29 134.0 1254 25.2
Lsat_1_v5_gn_8_85341 Lactuca sativa HOM05D002005 ORTHO05D003757 7.2e-29 134.0 1021 29.1
Aqoxy3G00499 Aquilegia oxysepala HOM05D002005 ORTHO05D003757 1.6e-28 132.9 1232 25.1
Gohir.D13G102100 Gossypium hirsutum HOM05D002005 ORTHO05D003757 1.6e-28 132.9 1122 25.4
FAN24G1358 Fragaria x ananassa HOM05D002005 ORTHO05D003757 6.1e-28 131.0 707 26.9
CiPaw.10G044600 Carya illinoinensis HOM05D002005 ORTHO05D003757 1.4e-27 129.8 1223 24.9
Sabra19G0054900 Salix brachista HOM05D002005 ORTHO05D003757 3.0e-27 128.6 554 29.4
C09p59080 Brassica napus HOM05D002005 ORTHO05D003757 6.7e-27 127.5 288 37.5
FAN15G1233 Fragaria x ananassa HOM05D002005 ORTHO05D003757 6.7e-27 127.5 427 30.4
Ah.13g070760 Amaranthus hybridus HOM05D002005 ORTHO05D003757 2.0e-26 125.9 1212 24.9
FAN20G0782 Fragaria x ananassa HOM05D002005 ORTHO05D003757 4.4e-26 124.8 729 26.7
C09p59060 Brassica napus HOM05D002005 ORTHO05D003757 9.7e-26 123.6 1183 24.6
Sed0026327 Sechium edule HOM05D002005 ORTHO05D003757 1.7e-25 122.9 949 26.1
Nn7g38016 Nelumbo nucifera HOM05D002005 ORTHO05D003757 2.2e-25 122.5 1404 24.9
TAR369G1119 Trochodendron aralioides HOM05D002005 ORTHO05D003757 4.8e-25 121.3 617 27.9
AT5G17910 Arabidopsis thaliana HOM05D002005 ORTHO05D003757 8.2e-25 120.6 946 26.0
Gohir.A13G097000 Gossypium hirsutum HOM05D002005 ORTHO05D003757 8.2e-25 120.6 1128 25.1
FAN27G2381 Fragaria x ananassa HOM05D002005 ORTHO05D003757 5.3e-24 117.9 741 25.8
Sed0005780 Sechium edule HOM05D002005 ORTHO05D003757 1.2e-23 116.7 771 27.6
PGR042G3731 Punica granatum HOM05D002005 ORTHO05D003757 1.0e-22 113.6 1117 26.0
DCAR_013506 Daucus carota HOM05D002005 ORTHO05D003757 3.8e-22 111.7 408 31.1
Nn2g11384 Nelumbo nucifera HOM05D002005 ORTHO05D003757 5.0e-22 111.3 175 43.4
CsaV3_4G031680 Cucumis sativus L. HOM05D002005 ORTHO05D003757 6.5e-22 110.9 964 25.5
AUR62037108 Chenopodium quinoa HOM05D002005 ORTHO05D003757 8.5e-22 110.5 930 26.2
Hund15172 Selenicereus undatus HOM05D002005 ORTHO05D003757 8.5e-22 110.5 1100 24.8
MELO3C008875.2 Cucumis melo HOM05D002005 ORTHO05D003757 1.9e-21 109.4 961 24.6
Aa31LG11G11930 Aethionema arabicum HOM05D002005 ORTHO05D003757 4.2e-21 108.2 1083 26.1
Sp6g26360 Schrenkiella parvula HOM05D002005 ORTHO05D003757 4.7e-20 104.8 1212 23.3
A10p21570 Brassica napus HOM05D002005 ORTHO05D003757 1.4e-19 103.2 1290 24.0
Gohir.D11G237400 Gossypium hirsutum HOM05D002005 ORTHO05D003757 1.4e-19 103.2 709 27.2
Gorai.007G250800 Gossypium raimondii HOM05D002005 ORTHO05D003757 2.3e-19 102.4 718 28.3
Thhalv10012439m.g Eutrema salsugineum HOM05D002005 ORTHO05D003757 3.9e-19 101.7 1204 23.4
THA.LOC104820809 Tarenaya hassleriana HOM05D002005 ORTHO05D003757 3.9e-19 101.7 1151 23.2
Potri.013G068800 Populus trichocarpa HOM05D002005 ORTHO05D003757 1.5e-18 99.8 1409 23.6
ClCG04G004830 Citrullus lanatus HOM05D002005 ORTHO05D003757 3.3e-18 98.6 979 24.0
AL1G51410 Arabidopsis lyrata HOM05D002005 ORTHO05D003757 7.4e-18 97.4 1167 24.5
Carub.0006s1612 Capsella rubella HOM05D002005 ORTHO05D003757 9.7e-18 97.1 1248 24.8
THA.LOC104802888 Tarenaya hassleriana HOM05D002005 ORTHO05D003757 9.7e-18 97.1 1227 23.1
HanXRQChr00c0297g0573161 Helianthus annuus HOM05D002005 ORTHO05D003757 4.8e-17 94.7 755 26.5
BraA03t10181Z Brassica rapa HOM05D002005 ORTHO05D003757 1.1e-16 93.6 1010 24.0
A03p08550 Brassica napus HOM05D002005 ORTHO05D003757 3.1e-16 92.0 1162 24.1
ClCG09G013260 Citrullus lanatus HOM05D002005 ORTHO05D003757 3.1e-16 92.0 963 24.4
SalBow1G2425 Salvia bowleyana HOM05D002005 ORTHO05D003757 5.3e-16 91.3 382 31.4
SGA_v2.0_scaffold240G44144 Striga asiatica HOM05D002005 ORTHO05D003757 7.0e-16 90.9 964 25.1
Manes.09G134400 Manihot esculenta HOM05D002005 ORTHO05D003757 1.2e-15 90.1 1142 24.4
PSO541G2770 Papaver somniferum HOM05D002005 ORTHO05D003757 1.2e-15 90.1 379 29.3
SalBow1G6156 Salvia bowleyana HOM05D002005 ORTHO05D003757 1.2e-15 90.1 388 31.4
BcaB01g05164 Brassica carinata HOM05D002005 ORTHO05D003757 1.6e-15 89.7 1141 23.8
C03p09980 Brassica napus HOM05D002005 ORTHO05D003757 1.6e-15 89.7 1141 23.8
BolC3t13486H Brassica oleracea HOM05D002005 ORTHO05D003757 1.6e-15 89.7 1141 23.8
AUR62042367 Chenopodium quinoa HOM05D002005 ORTHO05D003757 7.7e-15 87.4 937 25.2
PSO210G3936 Papaver somniferum HOM05D002005 ORTHO05D003757 7.7e-15 87.4 1234 24.1
PSO532G0028 Papaver somniferum HOM05D002005 ORTHO05D003757 2.9e-14 85.5 381 29.4
FvH4_2g10091 Fragaria vesca HOM05D002005 ORTHO05D003757 3.8e-14 85.1 244 29.9
PSO210G7347 Papaver somniferum HOM05D002005 ORTHO05D003757 6.5e-14 84.3 1284 23.1
CDE09G1138 Ceratophyllum demersum HOM05D002005 ORTHO05D003757 3.2e-13 82.0 249 31.3
Hma1.2p1_0165F.1_g073333 Hydrangea macrophylla HOM05D002005 ORTHO05D003757 1.2e-12 80.1 210 33.3
Sc01g0007860 Simmondsia chinensis HOM05D002005 ORTHO05D003757 1.6e-12 79.7 169 33.7
EL10Ac9g21403 Beta vulgaris HOM05D002005 ORTHO05D003757 6.1e-12 77.8 989 25.6
Nitab4.5_0003808g0060 Nicotiana tabacum HOM05D002005 ORTHO05D003757 8.0e-12 77.4 323 31.0
PSO801G0543 Papaver somniferum HOM05D002005 ORTHO05D003757 2.3e-11 75.9 599 23.0
Potri.019G044500 Populus trichocarpa HOM05D002005 ORTHO05D003757 2.3e-11 75.9 1070 24.1
PSO339G2450 Papaver somniferum HOM05D002005 ORTHO05D003757 4.0e-11 75.1 589 22.1
VMungo1383G0089 Vigna mungo HOM05D002005 ORTHO05D003757 5.2e-11 74.7 77 45.5
MBI19_g06602_MAGBIO Magnolia biondii HOM05D002005 ORTHO05D003757 8.8e-11 73.9 1140 22.0
PSO384G2823 Papaver somniferum HOM05D002005 ORTHO05D003757 8.8e-11 73.9 1001 24.2
MBI13_g15011_MAGBIO Magnolia biondii HOM05D002005 ORTHO05D003757 5.7e-10 71.2 743 23.0
CARHR195210 Cardamine hirsuta HOM05D002005 ORTHO05D003757 9.7e-10 70.5 1228 22.7
CDE08G0232 Ceratophyllum demersum HOM05D002005 ORTHO05D003757 1.3e-09 70.1 431 27.8
Solyc10g076995.1 Solanum lycopersicum HOM05D002005 ORTHO05D003757 3.7e-09 68.6 125 41.6
Dinv28617 Davidia involucrata HOM05D002005 ORTHO05D003757 1.4e-08 66.6 233 27.9
PGR119G2260 Punica granatum HOM05D002005 ORTHO05D003757 1.8e-08 66.2 148 27.7
TWI31G1266 Tripterygium wilfordii HOM05D002005 ORTHO05D006330 1.6e-07 63.2 94 37.2
vmacro07618 Vaccinium macrocarpon HOM05D002005 ORTHO05D003757 1.6e-07 63.2 697 23.2
BcaB01g04923 Brassica carinata HOM05D002005 ORTHO05D003757 3.5e-07 62.0 1146 23.0
Cfa011652 Carpinus fangiana HOM05D002005 ORTHO05D006330 4.5e-07 61.6 527 23.0
Aqoxy4G02664 Aquilegia oxysepala HOM05D002005 ORTHO05D003757 5.9e-07 61.2 641 23.2
MD11G1080500 Malus domestica HOM05D002005 ORTHO05D006330 7.7e-07 60.8 102 35.3
CANSAT54G0486 Cannabis sativa HOM05D002005 ORTHO05D003757 1.3e-06 60.1 93 35.5
RcHm_v2.0_Chr5g0068611 Rosa chinensis HOM05D002005 ORTHO05D006330 2.2e-06 59.3 92 37.0
PSO339G0059 Papaver somniferum HOM05D002005 ORTHO05D003757 3.8e-06 58.5 937 23.3
Prupe.6G060900 Prunus persica HOM05D002005 ORTHO05D006330 6.5e-06 57.8 102 33.3
CiPaw.13G080900 Carya illinoinensis HOM05D002005 ORTHO05D006330 8.5e-06 57.4 151 30.5
MD03G1075800 Malus domestica HOM05D002005 ORTHO05D006330 8.5e-06 57.4 102 33.3
Thecc.09G305600 Theobroma cacao HOM05D002005 ORTHO05D006330 8.5e-06 57.4 254 26.4


User provided reference genes

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