Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060385.2 Olea europaea HOM05D006877 ORTHO05D008735 0.0e+00 1204.9 1090 100.0
MSTRG.8575 Avicennia marina HOM05D006877 ORTHO05D008735 3.5e-195 686.4 1064 76.2
Migut.F00097 Erythranthe guttata HOM05D006877 ORTHO05D008735 3.3e-185 653.3 1061 72.8
DCAR_020407 Daucus carota HOM05D006877 ORTHO05D008735 4.1e-167 593.2 776 57.9
Dinv17258 Davidia involucrata HOM05D006877 ORTHO05D008735 1.8e-162 577.8 771 65.5
PGSC0003DMG400003143 Solanum tuberosum HOM05D006877 ORTHO05D008735 2.0e-161 574.3 747 74.0
CSS0011113 Camellia sinensis var. sinensis HOM05D006877 ORTHO05D008735 8.2e-160 568.9 1072 68.8
Nitab4.5_0011357g0010 Nicotiana tabacum HOM05D006877 ORTHO05D008735 2.4e-159 567.4 773 71.8
Nitab4.5_0000021g0490 Nicotiana tabacum HOM05D006877 ORTHO05D008735 5.9e-158 562.8 775 72.0
SalBow4G0068 Salvia bowleyana HOM05D006877 ORTHO05D008735 2.9e-157 560.5 1066 73.0
TAR381G0744 Trochodendron aralioides HOM05D006877 ORTHO05D008735 5.2e-154 549.7 759 62.3
Duzib106G0107 Durio zibethinus HOM05D006877 ORTHO05D008735 2.0e-153 547.7 774 69.6
SGA_v2.0_scaffold18G08509 Striga asiatica HOM05D006877 ORTHO05D008735 2.6e-153 547.4 763 67.4
Sopen03g027750 Solanum pennellii HOM05D006877 ORTHO05D008735 1.3e-152 545.0 747 72.4
Ciclev10018634m.g Citrus clementina HOM05D006877 ORTHO05D008735 1.4e-151 541.6 754 68.8
Atru.chr12.1962 Acer truncatum HOM05D006877 ORTHO05D008735 7.0e-151 539.3 751 66.4
Solyc03g097000.3 Solanum lycopersicum HOM05D006877 ORTHO05D008735 9.1e-151 538.9 1060 73.5
SalBow4G3121 Salvia bowleyana HOM05D006877 ORTHO05D008735 3.5e-150 537.0 1066 72.0
Prupe.2G325900 Prunus persica HOM05D006877 ORTHO05D008735 4.5e-150 536.6 722 64.7
Cc03_g15580 Coffea canephora HOM05D006877 ORTHO05D008735 8.5e-149 532.3 1090 69.3
Gohir.D08G242601 Gossypium hirsutum HOM05D006877 ORTHO05D008735 1.1e-148 531.9 756 70.9
Hma1.2p1_0758F.1_g213710 Hydrangea macrophylla HOM05D006877 ORTHO05D008735 1.1e-148 531.9 781 64.4
Gorai.004G258300 Gossypium raimondii HOM05D006877 ORTHO05D008735 1.5e-148 531.6 757 71.2
RcHm_v2.0_Chr1g0384191 Rosa chinensis HOM05D006877 ORTHO05D008735 1.9e-148 531.2 753 64.4
Gohir.A08G221900 Gossypium hirsutum HOM05D006877 ORTHO05D008735 2.7e-147 527.3 756 70.2
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 8.0e-147 525.8 819 61.9
QL09p024038 Quercus lobata HOM05D006877 ORTHO05D008735 1.0e-146 525.4 1073 69.0
Lsat_1_v5_gn_3_600 Lactuca sativa HOM05D006877 ORTHO05D008735 1.4e-146 525.0 779 64.4
CANSAT21G1458 Cannabis sativa HOM05D006877 ORTHO05D008735 1.8e-146 524.6 1063 65.7
FAN01G1958 Fragaria x ananassa HOM05D006877 ORTHO05D008735 3.0e-146 523.9 800 68.0
Lj1A1033T71 Lonicera japonica HOM05D006877 ORTHO05D008735 1.5e-145 521.5 750 70.9
TWI39G0452 Tripterygium wilfordii HOM05D006877 ORTHO05D008735 7.5e-145 519.2 776 60.6
FAN10G2126 Fragaria x ananassa HOM05D006877 ORTHO05D008735 1.7e-144 518.1 796 68.0
Lalb_Chr13g0294611 Lupinus albus HOM05D006877 ORTHO05D008735 6.3e-144 516.2 763 60.7
HanXRQChr01g0027911 Helianthus annuus HOM05D006877 ORTHO05D008735 1.8e-143 514.6 780 67.6
Peaxi162Scf00745g00840 Petunia axillaris HOM05D006877 ORTHO05D008735 1.2e-142 511.9 758 71.0
Actinidia18704 Actinidia chinensis HOM05D006877 ORTHO05D008735 1.9e-140 504.6 769 60.3
PSO063G6761 Papaver somniferum HOM05D006877 ORTHO05D008735 1.6e-139 501.5 765 59.7
CAN.G1131.10 Capsicum annuum HOM05D006877 ORTHO05D008735 1.0e-138 498.8 751 69.9
Nn1g01910 Nelumbo nucifera HOM05D006877 ORTHO05D008735 2.3e-138 497.7 749 68.2
Lj4g0001495 Lotus japonicus HOM05D006877 ORTHO05D008735 8.8e-138 495.7 766 63.1
VMungo0251G1190 Vigna mungo HOM05D006877 ORTHO05D008735 3.4e-137 493.8 763 59.2
PGR042G1249 Punica granatum HOM05D006877 ORTHO05D008735 5.7e-137 493.0 753 68.4
FAN03G2267 Fragaria x ananassa HOM05D006877 ORTHO05D008735 7.5e-137 492.7 755 63.4
GSVIVG01024409001 Vitis vinifera HOM05D006877 ORTHO05D008735 1.3e-136 491.9 750 54.3
Aqoxy3G02132 Aquilegia oxysepala HOM05D006877 ORTHO05D008735 4.1e-135 486.9 764 60.5
ECA246G2862 Erigeron canadensis HOM05D006877 ORTHO05D008735 4.1e-135 486.9 1060 65.0
Manes.09G127200 Manihot esculenta HOM05D006877 ORTHO05D008735 9.5e-132 475.7 747 64.3
MD01G1235800 Malus domestica HOM05D006877 ORTHO05D008735 1.6e-131 474.9 770 59.6
Ah.04g156540 Amaranthus hybridus HOM05D006877 ORTHO05D008735 1.0e-130 472.2 781 59.3
arahy.Tifrunner.gnm1.ann1.G9QUK2 Arachis hypogaea HOM05D006877 ORTHO05D008735 2.0e-129 468.0 782 60.0
EL10Ac3g05079 Beta vulgaris HOM05D006877 ORTHO05D008735 1.1e-127 462.2 766 59.9
Sabra19G0059000 Salix brachista HOM05D006877 ORTHO05D008735 1.4e-127 461.8 749 60.2
Medtr8g080940 Medicago truncatula HOM05D006877 ORTHO05D008735 1.6e-126 458.4 759 61.7
arahy.Tifrunner.gnm1.ann1.VTBJ7F Arachis hypogaea HOM05D006877 ORTHO05D008735 2.7e-126 457.6 776 59.7
THA.LOC104821701 Tarenaya hassleriana HOM05D006877 ORTHO05D008735 1.0e-125 455.7 784 60.6
Potri.019G049400 Populus trichocarpa HOM05D006877 ORTHO05D008735 8.6e-125 452.6 745 59.7
MBI04_g20982_MAGBIO Magnolia biondii HOM05D006877 ORTHO05D008735 5.6e-124 449.9 785 58.7
CsaV3_6G010140 Cucumis sativus L. HOM05D006877 ORTHO05D008735 2.8e-123 447.6 772 65.3
MELO3C024733.2 Cucumis melo HOM05D006877 ORTHO05D008735 1.1e-122 445.7 804 63.1
Sed0012706 Sechium edule HOM05D006877 ORTHO05D008735 1.4e-122 445.3 776 61.3
Psat7g076160 Pisum sativum HOM05D006877 ORTHO05D008735 1.8e-122 444.9 763 60.0
Glyma.08G106500 Glycine max HOM05D006877 ORTHO05D008735 6.8e-122 443.0 768 60.0
Sc25g0001210 Simmondsia chinensis HOM05D006877 ORTHO05D008735 1.2e-121 442.2 784 52.9
ClCG02G007690 Citrullus lanatus HOM05D006877 ORTHO05D008735 9.8e-121 439.1 781 64.5
Ca_18009_v3 Cicer arietinum L. HOM05D006877 ORTHO05D008735 1.3e-120 438.7 759 59.4
COL.COLO4_11806 Corchorus olitorius HOM05D006877 ORTHO05D008735 2.2e-120 438.0 753 61.0
Eucgr.A02969 Eucalyptus grandis HOM05D006877 ORTHO05D008735 1.9e-119 434.9 719 65.1
CARHR185880 Cardamine hirsuta HOM05D006877 ORTHO05D008735 3.5e-118 430.6 768 55.7
C07p40570 Brassica napus HOM05D006877 ORTHO05D008735 4.6e-118 430.3 781 56.0
Sp2g20510 Schrenkiella parvula HOM05D006877 ORTHO05D008735 2.3e-117 427.9 783 55.3
A06p37650 Brassica napus HOM05D006877 ORTHO05D008735 3.0e-117 427.6 792 55.6
Thhalv10003569m.g Eutrema salsugineum HOM05D006877 ORTHO05D008735 3.9e-117 427.2 779 57.9
BolC7t44594H Brassica oleracea HOM05D006877 ORTHO05D008735 2.5e-116 424.5 776 55.8
AL6G39840 Arabidopsis lyrata HOM05D006877 ORTHO05D008735 3.3e-116 424.1 768 52.5
BraA06t26685Z Brassica rapa HOM05D006877 ORTHO05D008735 3.3e-116 424.1 789 55.6
Aa31LG11G9010 Aethionema arabicum HOM05D006877 ORTHO05D008735 4.0e-114 417.2 767 55.7
Rhsim09G0212700 Rhododendron simsii HOM05D006877 ORTHO05D008735 5.2e-114 416.8 1065 62.5
TPR.G11966 Trifolium pratense HOM05D006877 ORTHO05D008735 6.8e-114 416.4 851 54.9
AUR62002061 Chenopodium quinoa HOM05D006877 ORTHO05D008735 2.4e-98 364.8 792 55.1
Hund27367 Selenicereus undatus HOM05D006877 ORTHO05D008735 1.6e-91 342.0 787 59.0
ATR0829G170 Amborella trichopoda HOM05D006877 ORTHO05D008735 6.2e-83 313.5 713 53.0
CDE03G0296 Ceratophyllum demersum HOM05D006877 ORTHO05D008735 3.7e-75 287.7 648 57.3
FvH4_7g33960 Fragaria vesca HOM05D006877 ORTHO05D008735 1.2e-73 282.7 310 52.3
Phvul.003G065400 Phaseolus vulgaris HOM05D006877 ORTHO05D008735 8.4e-72 276.6 320 49.7
Zm00001eb378980 Zea mays HOM05D006877 ORTHO05D008735 1.5e-68 265.8 768 48.0
Cpa.g.sc39.73 Carica papaya HOM05D006877 ORTHO05D008735 2.5e-68 265.0 270 54.4
Thecc.05G213300 Theobroma cacao HOM05D006877 ORTHO05D008735 1.1e-63 249.6 276 48.9
CiPaw.05G220200 Carya illinoinensis HOM05D006877 ORTHO05D008735 1.2e-62 246.1 292 50.3
AT5G27270 Arabidopsis thaliana HOM05D006877 ORTHO05D008735 2.0e-57 228.8 298 45.0
AUR62028175 Chenopodium quinoa HOM05D006877 ORTHO05D008735 1.3e-56 226.1 127 84.3
Os06g0111300 Oryza sativa ssp. japonica HOM05D006877 ORTHO05D008735 6.5e-56 223.8 162 65.4
Carub.0006s2526 Capsella rubella HOM05D006877 ORTHO05D008735 1.4e-53 216.1 289 43.6
Pp3c17_13520 Physcomitrium patens HOM05D006877 ORTHO05D008735 2.4e-42 178.7 197 50.8
Mapoly0001s0556 Marchantia polymorpha HOM05D006877 ORTHO05D008735 1.1e-39 169.9 184 48.9
HPP92_012823 Vanilla planifolia HOM05D006877 ORTHO05D008735 3.2e-39 168.3 308 35.7
SMO203G0003 Selaginella moellendorffii HOM05D006877 ORTHO05D008735 2.5e-31 142.1 204 41.2
vmacro22171 Vaccinium macrocarpon HOM05D006877 ORTHO05D008735 5.2e-29 134.4 588 25.9
SEGI_02928 Sequoiadendron giganteum HOM05D006877 ORTHO05D008735 2.4e-26 125.6 308 29.9
CDE06G2178 Ceratophyllum demersum HOM05D006877 ORTHO05D008735 2.9e-24 118.6 160 43.1
vmacro22170 Vaccinium macrocarpon HOM05D006877 ORTHO05D008735 1.1e-23 116.7 92 64.1
BcaNung02478 Brassica carinata HOM05D000721 ORTHO05D001990 5.5e-23 114.4 175 38.9
Cc01_g05460 Coffea canephora HOM05D006877 ORTHO05D008735 1.2e-22 113.2 86 62.8
vmacro22172 Vaccinium macrocarpon HOM05D006877 ORTHO05D008735 6.8e-21 107.5 92 58.7
CARHR259090 Cardamine hirsuta HOM05D006877 ORTHO05D008735 6.8e-13 80.9 50 72.0
TAR636G2077 Trochodendron aralioides HOM05D006877 ORTHO05D008735 2.2e-11 75.9 66 60.6
VMungo0251G3229 Vigna mungo HOM05D006877 ORTHO05D008735 1.4e-10 73.2 55 67.3
Lalb_Chr13g0294621 Lupinus albus HOM05D006877 ORTHO05D008735 2.7e-09 68.9 69 53.6
COL.COLO4_05229 Corchorus olitorius HOM05D006877 ORTHO05D008735 1.0e-08 67.0 59 59.3
CDE05G0456 Ceratophyllum demersum HOM05D002479 ORTHO05D002675 5.0e-08 64.7 90 36.7
HanXRQChr15g0480341 Helianthus annuus HOM05D002479 ORTHO05D002675 6.6e-08 64.3 90 35.6
MBI02_g29389_MAGBIO Magnolia biondii HOM05D002479 ORTHO05D002675 6.6e-08 64.3 89 37.1
Oeu043369.1 Olea europaea HOM05D002479 ORTHO05D002675 6.6e-08 64.3 90 36.7
Dinv01391 Davidia involucrata HOM05D002479 ORTHO05D002675 8.6e-08 63.9 100 33.0
Lsat_1_v5_gn_3_39301 Lactuca sativa HOM05D002479 ORTHO05D002675 8.6e-08 63.9 102 33.3
QL08p037589 Quercus lobata HOM05D002479 ORTHO05D002675 8.6e-08 63.9 100 34.0
AagrBONN_evm.TU.Sc2ySwM_362.1641 Anthoceros agrestis HOM05D006877 ORTHO05D008735 1.9e-07 62.8 230 23.5
PGR004G1668 Punica granatum HOM05D002479 ORTHO05D002675 2.5e-07 62.4 90 33.3
MELO3C014273.2 Cucumis melo HOM05D002479 ORTHO05D002675 3.3e-07 62.0 113 30.1
ClCG01G020210 Citrullus lanatus HOM05D002479 ORTHO05D002675 4.3e-07 61.6 199 25.6
Ciclev10017547m.g Citrus clementina HOM05D002479 ORTHO05D002675 4.3e-07 61.6 100 37.0
CsaV3_5G040330 Cucumis sativus L. HOM05D002479 ORTHO05D002675 4.3e-07 61.6 131 31.3
ClCG08G000450 Citrullus lanatus HOM05D002479 ORTHO05D002675 5.6e-07 61.2 100 34.0
Aqoxy4G01360 Aquilegia oxysepala HOM05D002479 ORTHO05D002675 7.3e-07 60.8 118 30.5
AUR62037373 Chenopodium quinoa HOM05D002479 ORTHO05D002675 7.3e-07 60.8 81 35.8
Cc05_g06520 Coffea canephora HOM05D002479 ORTHO05D002675 7.3e-07 60.8 100 32.0
Duzib212G0327 Durio zibethinus HOM05D002479 ORTHO05D002675 7.3e-07 60.8 102 30.4
FvH4_6g44930 Fragaria vesca HOM05D002479 ORTHO05D002675 7.3e-07 60.8 91 34.1
FAN02G3196 Fragaria x ananassa HOM05D002479 ORTHO05D002675 7.3e-07 60.8 91 34.1
FAN05G3474 Fragaria x ananassa HOM05D002479 ORTHO05D002675 7.3e-07 60.8 91 34.1
Rhsim05G0175800 Rhododendron simsii HOM05D002479 ORTHO05D002675 7.3e-07 60.8 113 28.3
CsaV3_4G030850 Cucumis sativus L. HOM05D002479 ORTHO05D002675 9.5e-07 60.5 113 29.2
FAN14G2792 Fragaria x ananassa HOM05D002479 ORTHO05D002675 9.5e-07 60.5 91 34.1
TAR626G0455 Trochodendron aralioides HOM05D002479 ORTHO05D002675 9.5e-07 60.5 90 34.4
Ah.01g005230 Amaranthus hybridus HOM05D002479 ORTHO05D002675 1.2e-06 60.1 78 35.9
CANSAT64G1102 Cannabis sativa HOM05D002479 ORTHO05D002675 1.2e-06 60.1 94 33.0
MD17G1081600 Malus domestica HOM05D002479 ORTHO05D002675 1.2e-06 60.1 91 35.2
Haze_13105 Corylus avellana HOM05D002479 ORTHO05D002675 1.6e-06 59.7 100 33.0
FAN09G3013 Fragaria x ananassa HOM05D002479 ORTHO05D002675 1.6e-06 59.7 91 33.0
Mapoly0019s0056 Marchantia polymorpha HOM05D002479 ORTHO05D002675 1.6e-06 59.7 103 31.1
Nitab4.5_0027477g0010 Nicotiana tabacum HOM05D002479 ORTHO05D002675 1.6e-06 59.7 90 33.3
MELO3C033525.2 Cucumis melo HOM05D002479 ORTHO05D002675 2.1e-06 59.3 90 35.6
Lalb_Chr15g0088581 Lupinus albus HOM05D002479 ORTHO05D002675 2.1e-06 59.3 91 34.1
Nn2g14806 Nelumbo nucifera HOM05D002479 ORTHO05D002675 2.1e-06 59.3 78 38.5
PSO210G1488 Papaver somniferum HOM05D002479 ORTHO05D002675 2.1e-06 59.3 94 33.0
Sed0011590 Sechium edule HOM05D002479 ORTHO05D002675 2.1e-06 59.3 113 31.9
Thecc.04G243400 Theobroma cacao HOM05D002479 ORTHO05D002675 2.1e-06 59.3 102 28.4
CSS0000020 Camellia sinensis var. sinensis HOM05D002479 ORTHO05D002675 2.8e-06 58.9 89 33.7
CSS0034469 Camellia sinensis var. sinensis HOM05D002479 ORTHO05D002675 2.8e-06 58.9 89 33.7
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 2.8e-06 58.9 91 35.2
Nn2g14491 Nelumbo nucifera HOM05D004783 ORTHO05D005581 2.8e-06 58.9 335 19.7
MD09G1091700 Malus domestica HOM05D002479 ORTHO05D002675 3.6e-06 58.5 91 34.1
MSTRG.19663 Avicennia marina HOM05D006258 ORTHO05D007961 4.7e-06 58.2 99 29.3
PSO528G0065 Papaver somniferum HOM05D002479 ORTHO05D002675 4.7e-06 58.2 94 31.9
TWI36G0440 Tripterygium wilfordii HOM05D002479 ORTHO05D002675 4.7e-06 58.2 100 32.0
EL10Ac9g20676 Beta vulgaris HOM05D002479 ORTHO05D002675 6.2e-06 57.8 81 37.0
Cfa014560 Carpinus fangiana HOM05D002479 ORTHO05D002675 6.2e-06 57.8 94 33.0
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 8.0e-06 57.4 64 45.3
Nitab4.5_0009520g0020 Nicotiana tabacum HOM05D002479 ORTHO05D002675 8.0e-06 57.4 81 34.6
Peaxi162Scf00007g00285 Petunia axillaris HOM05D002479 ORTHO05D002675 8.0e-06 57.4 90 32.2
Sc19g0003840 Simmondsia chinensis HOM05D002479 ORTHO05D002675 8.0e-06 57.4 113 30.1
Zm00001eb004770 Zea mays HOM05D002479 ORTHO05D002675 8.0e-06 57.4 94 29.8


User provided reference genes

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