Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060253.1 Olea europaea HOM05D001130 ORTHO05D290248 1.2e-38 163.7 162 100.0
Oeu055800.1 Olea europaea HOM05D001130 ORTHO05D001052 1.6e-11 73.6 40 85.0
Lj2A1145T39 Lonicera japonica HOM05D001130 ORTHO05D001052 8.8e-10 67.8 40 77.5
Oeu035714.1 Olea europaea HOM05D001130 ORTHO05D001052 1.2e-09 67.4 40 75.0
Actinidia37535 Actinidia chinensis HOM05D001130 ORTHO05D001052 4.4e-09 65.5 40 72.5
MSTRG.18340 Avicennia marina HOM05D001130 ORTHO05D001052 9.8e-09 64.3 40 72.5
MSTRG.21474 Avicennia marina HOM05D001130 ORTHO05D001052 9.8e-09 64.3 40 72.5
Peaxi162Scf00415g00311 Petunia axillaris HOM05D001130 ORTHO05D001052 9.8e-09 64.3 40 72.5
Rhsim13G0038500 Rhododendron simsii HOM05D001130 ORTHO05D001052 9.8e-09 64.3 40 72.5
vmacro02696 Vaccinium macrocarpon HOM05D001130 ORTHO05D001052 9.8e-09 64.3 40 72.5
DCAR_012567 Daucus carota HOM05D001130 ORTHO05D001052 1.3e-08 63.9 40 70.0
CAN.G1270.7 Capsicum annuum HOM05D001130 ORTHO05D001052 1.7e-08 63.5 40 72.5
Nitab4.5_0001945g0060 Nicotiana tabacum HOM05D001130 ORTHO05D001052 1.7e-08 63.5 40 72.5
Dinv29828 Davidia involucrata HOM05D001130 ORTHO05D001052 2.2e-08 63.2 39 71.8
DCAR_018505 Daucus carota HOM05D001130 ORTHO05D001052 2.8e-08 62.8 40 70.0
Aqoxy5G00178 Aquilegia oxysepala HOM05D001130 ORTHO05D001052 3.7e-08 62.4 39 69.2
CSS0047936 Camellia sinensis var. sinensis HOM05D001130 ORTHO05D001052 3.7e-08 62.4 40 70.0
Nitab4.5_0003295g0090 Nicotiana tabacum HOM05D001130 ORTHO05D001052 3.7e-08 62.4 40 70.0
Os10g0471400 Oryza sativa ssp. japonica HOM05D001130 ORTHO05D001052 3.7e-08 62.4 39 71.8
TAR365G1006 Trochodendron aralioides HOM05D001130 ORTHO05D001052 3.7e-08 62.4 39 71.8
vmacro08528 Vaccinium macrocarpon HOM05D001130 ORTHO05D001052 3.7e-08 62.4 39 74.4
DCAR_005677 Daucus carota HOM05D001130 ORTHO05D001052 4.9e-08 62.0 40 67.5
Actinidia35807 Actinidia chinensis HOM05D001130 ORTHO05D001052 6.3e-08 61.6 39 71.8
Ciclev10004566m.g Citrus clementina HOM05D001130 ORTHO05D001052 8.3e-08 61.2 39 71.8
Manes.15G043700 Manihot esculenta HOM05D001130 ORTHO05D001052 8.3e-08 61.2 40 67.5
MSTRG.4154 Avicennia marina HOM05D001130 ORTHO05D001052 1.1e-07 60.8 39 66.7
Cc01_g18030 Coffea canephora HOM05D001130 ORTHO05D001052 1.1e-07 60.8 40 67.5
Dinv27087 Davidia involucrata HOM05D001130 ORTHO05D001052 1.4e-07 60.5 39 69.2
Sed0026953 Sechium edule HOM05D001130 ORTHO05D001052 1.4e-07 60.5 39 69.2
CANSAT78G1469 Cannabis sativa HOM05D001130 ORTHO05D001052 2.4e-07 59.7 39 74.4
Dinv16376 Davidia involucrata HOM05D001130 ORTHO05D001052 2.4e-07 59.7 40 67.5
Hma1.2p1_0273F.1_g109380 Hydrangea macrophylla HOM05D001130 ORTHO05D001052 2.4e-07 59.7 40 67.5
Rhsim04G0175300 Rhododendron simsii HOM05D001130 ORTHO05D001052 2.4e-07 59.7 39 69.2
Thecc.04G259900 Theobroma cacao HOM05D001130 ORTHO05D001052 2.4e-07 59.7 39 71.8
CSS0009963 Camellia sinensis var. sinensis HOM05D001130 ORTHO05D001052 3.1e-07 59.3 44 65.9
CSS0024608 Camellia sinensis var. sinensis HOM05D001130 ORTHO05D001052 3.1e-07 59.3 44 65.9
Manes.03G161800 Manihot esculenta HOM05D001130 ORTHO05D001052 3.1e-07 59.3 40 65.0
Sc13g0005890 Simmondsia chinensis HOM05D001130 ORTHO05D001052 3.1e-07 59.3 39 69.2
COL.COLO4_15928 Corchorus olitorius HOM05D001130 ORTHO05D001052 4.1e-07 58.9 39 69.2
Duzib151G1211 Durio zibethinus HOM05D001130 ORTHO05D001052 4.1e-07 58.9 39 71.8
TAR636G1801 Trochodendron aralioides HOM05D001130 ORTHO05D001052 4.1e-07 58.9 39 69.2
Zm00001eb046100 Zea mays HOM05D001130 ORTHO05D001052 4.1e-07 58.9 38 68.4
Cpa.g.sc44.26 Carica papaya HOM05D001130 ORTHO05D013423 5.4e-07 58.5 39 66.7
ClCG05G004170 Citrullus lanatus HOM05D001130 ORTHO05D001052 5.4e-07 58.5 39 66.7
Dinv34655 Davidia involucrata HOM05D001130 ORTHO05D001052 5.4e-07 58.5 40 62.5
SalBow4G1556 Salvia bowleyana HOM05D001130 ORTHO05D001052 5.4e-07 58.5 40 67.5
arahy.Tifrunner.gnm1.ann1.P6LAK9 Arachis hypogaea HOM05D001130 ORTHO05D001052 7.0e-07 58.2 39 71.8
Lsat_1_v5_gn_2_39660 Lactuca sativa HOM05D001130 ORTHO05D001052 7.0e-07 58.2 39 64.1
QL06p019976 Quercus lobata HOM05D001130 ORTHO05D001052 7.0e-07 58.2 39 69.2
Haze_11426 Corylus avellana HOM05D001130 ORTHO05D001052 9.2e-07 57.8 39 66.7
HanXRQChr05g0160761 Helianthus annuus HOM05D001130 ORTHO05D001052 9.2e-07 57.8 40 60.0
Peaxi162Scf00579g00212 Petunia axillaris HOM05D001130 ORTHO05D001052 9.2e-07 57.8 39 61.5
GSVIVG01028378001 Vitis vinifera HOM05D001130 ORTHO05D001052 9.2e-07 57.8 40 65.0
Cc03_g05870 Coffea canephora HOM05D001130 ORTHO05D001052 1.2e-06 57.4 39 66.7
MELO3C006401.2 Cucumis melo HOM05D001130 ORTHO05D001052 1.2e-06 57.4 39 66.7
ECA248G2860 Erigeron canadensis HOM05D001130 ORTHO05D001052 1.2e-06 57.4 40 60.0
Gohir.D02G046900 Gossypium hirsutum HOM05D001130 ORTHO05D001052 1.2e-06 57.4 39 69.2
Gorai.005G051900 Gossypium raimondii HOM05D001130 ORTHO05D001052 1.2e-06 57.4 39 69.2
Lj5g0010890 Lotus japonicus HOM05D001130 ORTHO05D001052 1.2e-06 57.4 39 69.2
Nn1g02843 Nelumbo nucifera HOM05D001130 ORTHO05D001052 1.2e-06 57.4 39 64.1
Prupe.1G044600 Prunus persica HOM05D001130 ORTHO05D001052 1.2e-06 57.4 39 69.2
Solyc06g053530.3 Solanum lycopersicum HOM05D001130 ORTHO05D001052 1.2e-06 57.4 39 64.1
Sopen06g018620 Solanum pennellii HOM05D001130 ORTHO05D001052 1.2e-06 57.4 39 64.1
Gohir.A02G041100 Gossypium hirsutum HOM05D001130 ORTHO05D001052 1.6e-06 57.0 39 69.2
Lalb_Chr02g0150331 Lupinus albus HOM05D001130 ORTHO05D001052 1.6e-06 57.0 39 64.1
Psat6g124600 Pisum sativum HOM05D001130 ORTHO05D001052 1.6e-06 57.0 39 64.1
Solyc09g072650.4 Solanum lycopersicum HOM05D001130 ORTHO05D001052 1.6e-06 57.0 40 62.5
Sopen09g028460 Solanum pennellii HOM05D001130 ORTHO05D001052 1.6e-06 57.0 40 62.5
PGSC0003DMG402024293 Solanum tuberosum HOM05D001130 ORTHO05D001052 1.6e-06 57.0 40 62.5
TPR.G10053 Trifolium pratense HOM05D001130 ORTHO05D001052 1.6e-06 57.0 39 66.7
CSS0015498 Camellia sinensis var. sinensis HOM05D001130 ORTHO05D001052 2.0e-06 56.6 39 66.7
CAN.G1234.2 Capsicum annuum HOM05D001130 ORTHO05D001052 2.0e-06 56.6 39 61.5
Glyma.10G183700 Glycine max HOM05D001130 ORTHO05D001052 2.0e-06 56.6 39 66.7
Medtr1g075480 Medicago truncatula HOM05D001130 ORTHO05D001052 2.0e-06 56.6 39 66.7
PGR004G2608 Punica granatum HOM05D001130 ORTHO05D001052 2.0e-06 56.6 39 69.2
arahy.Tifrunner.gnm1.ann1.6YDN9G Arachis hypogaea HOM05D001130 ORTHO05D001052 2.7e-06 56.2 39 69.2
Ca_09844_v3 Cicer arietinum L. HOM05D001130 ORTHO05D001052 2.7e-06 56.2 39 64.1
Lj6A624T62 Lonicera japonica HOM05D001130 ORTHO05D001052 3.5e-06 55.8 39 61.5
unitig_748.g8304 Utricularia gibba HOM05D001130 ORTHO05D001052 3.5e-06 55.8 39 64.1
CsaV3_3G011890 Cucumis sativus L. HOM05D001130 ORTHO05D001052 4.5e-06 55.5 39 61.5
Sabra02G0197300 Salix brachista HOM05D001130 ORTHO05D001052 4.5e-06 55.5 40 67.5
VMungo0720G3163 Vigna mungo HOM05D001130 ORTHO05D001052 4.5e-06 55.5 39 61.5
ECA247G0786 Erigeron canadensis HOM05D001130 ORTHO05D001052 5.9e-06 55.1 40 57.5
Eucgr.H02997 Eucalyptus grandis HOM05D001130 ORTHO05D001052 5.9e-06 55.1 39 61.5
Potri.010G068700 Populus trichocarpa HOM05D001130 ORTHO05D001052 5.9e-06 55.1 39 64.1
TWI09G1148 Tripterygium wilfordii HOM05D001130 ORTHO05D001052 5.9e-06 55.1 39 61.5
EL10Ac7g17643 Beta vulgaris HOM05D001130 ORTHO05D001052 7.7e-06 54.7 39 59.0
HanXRQChr10g0280711 Helianthus annuus HOM05D001130 ORTHO05D001052 7.7e-06 54.7 40 57.5
Thecc.10G124100 Theobroma cacao HOM05D001130 ORTHO05D013423 7.7e-06 54.7 39 69.2


User provided reference genes

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