Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059724.1 Olea europaea HOM05D006021 ORTHO05D007747 2.8e-85 318.5 160 100.0
Actinidia29224 Actinidia chinensis HOM05D006021 ORTHO05D007747 5.6e-57 224.6 155 71.6
vmacro10241 Vaccinium macrocarpon HOM05D006021 ORTHO05D007747 2.8e-56 222.2 147 72.8
Migut.F01499 Erythranthe guttata HOM05D006021 ORTHO05D007747 1.4e-55 219.9 138 76.1
Cc02_g08000 Coffea canephora HOM05D006021 ORTHO05D007747 2.3e-55 219.2 158 69.6
CAN.G1013.12 Capsicum annuum HOM05D006021 ORTHO05D007747 4.0e-55 218.4 158 68.4
Nitab4.5_0006095g0010 Nicotiana tabacum HOM05D006021 ORTHO05D007747 1.5e-54 216.5 166 66.3
Peaxi162Scf00015g00149 Petunia axillaris HOM05D006021 ORTHO05D007747 1.5e-54 216.5 159 67.3
Sopen05g033000 Solanum pennellii HOM05D006021 ORTHO05D007747 1.3e-53 213.4 146 71.2
Nitab4.5_0006262g0010 Nicotiana tabacum HOM05D006021 ORTHO05D007747 2.9e-53 212.2 166 65.1
TAR636G1861 Trochodendron aralioides HOM05D006021 ORTHO05D007747 4.9e-53 211.5 150 68.7
SalBow6G7105 Salvia bowleyana HOM05D006021 ORTHO05D007747 1.1e-52 210.3 146 69.9
PGSC0003DMG400023528 Solanum tuberosum HOM05D006021 ORTHO05D007747 1.4e-52 209.9 146 69.9
SGA_v2.0_scaffold108G31009 Striga asiatica HOM05D006021 ORTHO05D002218 1.4e-52 209.9 146 70.5
HanXRQChr14g0458171 Helianthus annuus HOM05D006021 ORTHO05D007747 2.4e-52 209.1 158 66.5
Lj1C935G17 Lonicera japonica HOM05D006021 ORTHO05D007747 3.2e-52 208.8 138 71.0
Rhsim09G0165400 Rhododendron simsii HOM05D006021 ORTHO05D007747 4.1e-52 208.4 143 69.9
Solyc05g054520.4 Solanum lycopersicum HOM05D006021 ORTHO05D007747 4.1e-52 208.4 146 69.9
CSS0040652 Camellia sinensis var. sinensis HOM05D006021 ORTHO05D007747 1.6e-51 206.5 149 69.8
Cfa001493 Carpinus fangiana HOM05D006021 ORTHO05D007747 3.5e-51 205.3 150 66.0
Manes.10G031500 Manihot esculenta HOM05D006021 ORTHO05D007747 6.0e-51 204.5 157 68.8
GSVIVG01016534001 Vitis vinifera HOM05D006021 ORTHO05D007747 7.8e-51 204.1 143 70.6
ECA238G0092 Erigeron canadensis HOM05D006021 ORTHO05D007747 1.7e-50 203.0 150 65.3
Eucgr.J00022 Eucalyptus grandis HOM05D006021 ORTHO05D007747 3.9e-50 201.8 163 62.6
PGR044G0630 Punica granatum HOM05D006021 ORTHO05D007747 2.5e-49 199.1 164 62.2
Lsat_1_v5_gn_2_119720 Lactuca sativa HOM05D006021 ORTHO05D007747 7.3e-49 197.6 191 55.5
Potri.008G054500 Populus trichocarpa HOM05D006021 ORTHO05D007747 9.5e-49 197.2 143 67.1
Sabra08G0039300 Salix brachista HOM05D006021 ORTHO05D007747 2.1e-48 196.1 155 63.2
TWI63G0178 Tripterygium wilfordii HOM05D006021 ORTHO05D007747 2.1e-48 196.1 140 67.1
CANSAT56G3892 Cannabis sativa HOM05D006021 ORTHO05D007747 2.8e-48 195.7 155 60.6
QL08p059185 Quercus lobata HOM05D006021 ORTHO05D007747 1.1e-47 193.7 147 63.3
TWI15G0276 Tripterygium wilfordii HOM05D006021 ORTHO05D007747 4.0e-47 191.8 140 65.7
Prupe.2G233300 Prunus persica HOM05D006021 ORTHO05D007747 6.8e-47 191.0 141 66.7
CiPaw.02G183200 Carya illinoinensis HOM05D006021 ORTHO05D007747 8.9e-47 190.7 150 62.0
Ciclev10031583m.g Citrus clementina HOM05D006021 ORTHO05D007747 1.2e-46 190.3 158 60.1
MD01G1126400 Malus domestica HOM05D006021 ORTHO05D007747 1.2e-46 190.3 141 67.4
MBI05_g22898_MAGBIO Magnolia biondii HOM05D006021 ORTHO05D007747 1.5e-46 189.9 152 61.8
Oeu011120.1 Olea europaea HOM05D006021 ORTHO05D007747 2.6e-46 189.1 127 77.2
Dinv26002 Davidia involucrata HOM05D006021 ORTHO05D007747 5.8e-46 188.0 117 77.8
Atru.chr12.463 Acer truncatum HOM05D006021 ORTHO05D007747 9.9e-46 187.2 140 62.9
Atru.chr12.485 Acer truncatum HOM05D006021 ORTHO05D007747 9.9e-46 187.2 140 62.9
COL.COLO4_14996 Corchorus olitorius HOM05D006021 ORTHO05D007747 9.9e-46 187.2 149 61.7
CsaV3_5G026490 Cucumis sativus L. HOM05D006021 ORTHO05D007747 9.9e-46 187.2 158 60.1
Thecc.10G044200 Theobroma cacao HOM05D006021 ORTHO05D007747 9.9e-46 187.2 138 63.8
MBI05_g44084_MAGBIO Magnolia biondii HOM05D006021 ORTHO05D007747 1.7e-45 186.4 138 65.2
Sed0015354 Sechium edule HOM05D006021 ORTHO05D007747 1.7e-45 186.4 142 63.4
Lj1g0022473 Lotus japonicus HOM05D006021 ORTHO05D007747 2.9e-45 185.7 142 62.7
Cpa.g.sc1.396 Carica papaya HOM05D006021 ORTHO05D007747 3.8e-45 185.3 147 60.5
arahy.Tifrunner.gnm1.ann1.53WLRG Arachis hypogaea HOM05D006021 ORTHO05D007747 6.4e-45 184.5 154 59.1
arahy.Tifrunner.gnm1.ann1.G8Y61E Arachis hypogaea HOM05D006021 ORTHO05D007747 6.4e-45 184.5 154 59.1
Sc20g0002660 Simmondsia chinensis HOM05D006021 ORTHO05D007747 6.4e-45 184.5 147 63.9
AL4G36960 Arabidopsis lyrata HOM05D006021 ORTHO05D007747 8.4e-45 184.1 144 60.4
BraA05t19650Z Brassica rapa HOM05D006021 ORTHO05D007747 8.4e-45 184.1 148 58.8
Hund12509 Selenicereus undatus HOM05D006021 ORTHO05D007747 8.4e-45 184.1 148 63.5
MELO3C021654.2 Cucumis melo HOM05D006021 ORTHO05D007747 1.1e-44 183.7 138 65.2
Duzib106G0269 Durio zibethinus HOM05D006021 ORTHO05D007747 1.1e-44 183.7 146 61.0
Gorai.011G256900 Gossypium raimondii HOM05D006021 ORTHO05D007747 1.1e-44 183.7 158 58.2
RcHm_v2.0_Chr1g0366501 Rosa chinensis HOM05D006021 ORTHO05D007747 1.1e-44 183.7 140 65.0
C04p08110 Brassica napus HOM05D006021 ORTHO05D007747 1.4e-44 183.3 148 58.1
BolC4t22421H Brassica oleracea HOM05D006021 ORTHO05D007747 1.4e-44 183.3 148 58.1
A05p06840 Brassica napus HOM05D006021 ORTHO05D007747 3.2e-44 182.2 148 58.1
DCAR_012451 Daucus carota HOM05D006021 ORTHO05D007747 3.2e-44 182.2 145 59.3
Glyma.18G289300 Glycine max HOM05D006021 ORTHO05D007747 3.2e-44 182.2 137 61.3
Gohir.A10G216800 Gossypium hirsutum HOM05D006021 ORTHO05D007747 3.2e-44 182.2 157 57.3
MD07G1196300 Malus domestica HOM05D006021 ORTHO05D007747 3.2e-44 182.2 142 65.5
Gohir.D10G225700 Gossypium hirsutum HOM05D006021 ORTHO05D007747 4.2e-44 181.8 157 58.0
AT2G39550 Arabidopsis thaliana HOM05D006021 ORTHO05D007747 7.1e-44 181.0 147 60.5
AUR62038353 Chenopodium quinoa HOM05D006021 ORTHO05D007747 1.2e-43 180.3 139 64.0
BcaC02g12082 Brassica carinata HOM05D006021 ORTHO05D007747 1.6e-43 179.9 148 57.4
Glyma.02G093000 Glycine max HOM05D006021 ORTHO05D007747 1.6e-43 179.9 133 62.4
BcaB02g09111 Brassica carinata HOM05D006021 ORTHO05D007747 2.7e-43 179.1 142 59.9
Sp4g21840 Schrenkiella parvula HOM05D006021 ORTHO05D007747 6.0e-43 177.9 148 58.1
THA.LOC104824271 Tarenaya hassleriana HOM05D006021 ORTHO05D007747 6.0e-43 177.9 138 63.0
Thhalv10016771m.g Eutrema salsugineum HOM05D006021 ORTHO05D007747 1.3e-42 176.8 144 59.0
AUR62041863 Chenopodium quinoa HOM05D006021 ORTHO05D007747 1.7e-42 176.4 139 63.3
Phvul.008G012800 Phaseolus vulgaris HOM05D006021 ORTHO05D007747 1.7e-42 176.4 133 63.2
Lalb_Chr10g0091731 Lupinus albus HOM05D006021 ORTHO05D007747 3.0e-42 175.6 144 61.8
VMungo1383G0472 Vigna mungo HOM05D006021 ORTHO05D007747 3.9e-42 175.3 133 60.9
CARHR134420 Cardamine hirsuta HOM05D006021 ORTHO05D007747 8.7e-42 174.1 144 57.6
Psat3g181400 Pisum sativum HOM05D006021 ORTHO05D007747 8.7e-42 174.1 143 59.4
Aa31LG5G20070 Aethionema arabicum HOM05D006021 ORTHO05D007747 1.1e-41 173.7 148 56.1
Hma1.2p1_0683F.1_g202880 Hydrangea macrophylla HOM05D006021 ORTHO05D007747 1.1e-41 173.7 149 62.4
Migut.F01631 Erythranthe guttata HOM05D006021 ORTHO05D007747 1.9e-41 172.9 117 70.9
EL10Ac2g03391 Beta vulgaris HOM05D006021 ORTHO05D007747 4.3e-41 171.8 148 58.8
Nn2g10394 Nelumbo nucifera HOM05D006021 ORTHO05D007747 5.6e-41 171.4 176 52.8
FAN01G2389 Fragaria x ananassa HOM05D006021 ORTHO05D007747 7.3e-41 171.0 139 62.6
FAN03G1562 Fragaria x ananassa HOM05D006021 ORTHO05D007747 7.3e-41 171.0 138 62.3
FvH4_7g22110 Fragaria vesca HOM05D006021 ORTHO05D007747 1.2e-40 170.2 139 61.2
PSO339G2275 Papaver somniferum HOM05D006021 ORTHO05D007747 1.2e-40 170.2 150 56.7
FAN06G5027 Fragaria x ananassa HOM05D006021 ORTHO05D007747 1.6e-40 169.9 139 61.9
PSO151G0110 Papaver somniferum HOM05D006021 ORTHO05D007747 2.8e-40 169.1 144 56.2
Carub.0004s2162 Capsella rubella HOM05D006021 ORTHO05D007747 3.6e-40 168.7 145 58.6
Medtr7g024540 Medicago truncatula HOM05D006021 ORTHO05D007747 3.6e-40 168.7 145 57.2
FAN10G0846 Fragaria x ananassa HOM05D006021 ORTHO05D007747 4.7e-40 168.3 138 61.6
TPR.G15521 Trifolium pratense HOM05D006021 ORTHO05D007747 4.7e-40 168.3 143 57.3
Ca_07253_v3 Cicer arietinum L. HOM05D006021 ORTHO05D007747 6.2e-40 167.9 138 60.1
ClCG09G019960 Citrullus lanatus HOM05D006021 ORTHO05D007747 1.1e-39 167.2 181 50.8
Os01g0150100 Oryza sativa ssp. japonica HOM05D006021 ORTHO05D007747 4.4e-38 161.8 148 55.4
Aqoxy2G02096 Aquilegia oxysepala HOM05D006021 ORTHO05D007747 5.8e-38 161.4 139 58.3
CDE09G0613 Ceratophyllum demersum HOM05D006021 ORTHO05D007747 2.4e-36 156.0 143 56.6
HPP92_001683 Vanilla planifolia HOM05D006021 ORTHO05D007747 7.8e-35 151.0 141 54.6
unitig_736.g22256 Utricularia gibba HOM05D006021 ORTHO05D007747 3.9e-34 148.7 163 53.4
SHI22569 Sapria himalayana HOM05D006021 ORTHO05D007747 1.9e-33 146.4 153 51.0
Potri.010G206001 Populus trichocarpa HOM05D006021 ORTHO05D007747 5.6e-33 144.8 116 61.2
Dinv31447 Davidia involucrata HOM05D006021 ORTHO05D007747 1.3e-32 143.7 88 72.7
Zm00001eb124350 Zea mays HOM05D006021 ORTHO05D007747 6.9e-31 137.9 138 50.0
Haze_17048 Corylus avellana HOM05D006021 ORTHO05D007747 1.9e-28 129.8 152 51.3
ATR0559G127 Amborella trichopoda HOM05D006021 ORTHO05D007747 6.0e-27 124.8 126 50.0
FAN01G3064 Fragaria x ananassa HOM05D006021 ORTHO05D007747 2.3e-26 122.9 180 44.4
Mapoly0010s0084 Marchantia polymorpha HOM05D006021 ORTHO05D007747 3.8e-21 105.5 142 43.7
Pp3c5_25290 Physcomitrium patens HOM05D006021 ORTHO05D007747 1.9e-20 103.2 144 41.0
Ah.16g107020 Amaranthus hybridus HOM05D006021 ORTHO05D007747 1.2e-19 100.5 72 63.9
SEGI_08033 Sequoiadendron giganteum HOM05D006021 ORTHO05D007747 1.8e-15 86.7 95 54.7
AUR62013259 Chenopodium quinoa HOM05D023548 ORTHO05D009800 1.7e-13 80.1 79 59.5
SMO116G0097 Selaginella moellendorffii HOM05D006021 ORTHO05D007747 3.8e-13 79.0 139 38.8
Ah.16g107030 Amaranthus hybridus HOM05D006021 ORTHO05D007747 3.3e-09 65.9 42 76.2
AagrBONN_evm.TU.Sc2ySwM_362.2940 Anthoceros agrestis HOM05D006021 ORTHO05D007747 3.1e-07 59.3 89 40.4
BcaB06g29096 Brassica carinata HOM05D006021 ORTHO05D007747 1.2e-06 57.4 53 52.8
SEGI_34324 Sequoiadendron giganteum HOM05D006021 ORTHO05D387221 1.2e-06 57.4 52 55.8
AL6G32390 Arabidopsis lyrata HOM05D006021 ORTHO05D007747 2.0e-06 56.6 39 64.1


User provided reference genes

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