Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059338.2 Olea europaea HOM05D003729 ORTHO05D004384 3.1e-165 585.1 303 100.0
MSTRG.19814 Avicennia marina HOM05D003729 ORTHO05D004384 2.7e-92 342.8 358 57.5
Actinidia38159 Actinidia chinensis HOM05D003729 ORTHO05D004384 1.0e-83 314.3 359 52.9
Cc06_g19080 Coffea canephora HOM05D003729 ORTHO05D004384 4.3e-82 308.9 359 54.3
Dinv34365 Davidia involucrata HOM05D003729 ORTHO05D004384 1.6e-81 307.0 379 51.7
Dinv26813 Davidia involucrata HOM05D003729 ORTHO05D004384 2.3e-80 303.1 372 51.9
unitig_27.g24938 Utricularia gibba HOM05D003729 ORTHO05D004384 2.0e-79 300.1 366 50.3
Hma1.2p1_0402F.1_g145090 Hydrangea macrophylla HOM05D003729 ORTHO05D004384 5.8e-79 298.5 368 50.8
TAR629G1039 Trochodendron aralioides HOM05D003729 ORTHO05D004384 3.7e-78 295.8 367 50.7
CiPaw.09G047000 Carya illinoinensis HOM05D003729 ORTHO05D004384 4.9e-78 295.4 364 51.4
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 1.4e-77 293.9 362 50.8
Nitab4.5_0005447g0050 Nicotiana tabacum HOM05D003729 ORTHO05D004384 1.4e-77 293.9 362 50.8
GSVIVG01033615001 Vitis vinifera HOM05D003729 ORTHO05D004384 1.9e-77 293.5 365 51.5
Sopen10g034990 Solanum pennellii HOM05D003729 ORTHO05D004384 2.4e-77 293.1 358 51.1
Migut.N03364 Erythranthe guttata HOM05D003729 ORTHO05D004384 7.0e-77 291.6 356 51.7
ClCG09G015010 Citrullus lanatus HOM05D003729 ORTHO05D004384 9.2e-77 291.2 351 50.4
QL06p031735 Quercus lobata HOM05D003729 ORTHO05D004384 1.2e-76 290.8 366 50.0
CSS0000349 Camellia sinensis var. sinensis HOM05D003729 ORTHO05D004384 2.0e-76 290.0 366 51.1
Nn7g37723 Nelumbo nucifera HOM05D003729 ORTHO05D004384 7.8e-76 288.1 362 50.6
EL10Ac3g07219 Beta vulgaris HOM05D003729 ORTHO05D004384 3.0e-75 286.2 357 49.9
Ah.04g151040 Amaranthus hybridus HOM05D003729 ORTHO05D004384 1.1e-74 284.3 352 49.7
DCAR_013638 Daucus carota HOM05D003729 ORTHO05D004384 1.5e-74 283.9 362 48.3
Manes.15G116200 Manihot esculenta HOM05D003729 ORTHO05D004384 1.9e-74 283.5 368 49.5
Eucgr.B01227 Eucalyptus grandis HOM05D003729 ORTHO05D004384 5.6e-74 282.0 366 48.9
HanXRQChr10g0311271 Helianthus annuus HOM05D003729 ORTHO05D004384 5.6e-74 282.0 356 50.3
COL.COLO4_31341 Corchorus olitorius HOM05D003729 ORTHO05D004384 1.2e-73 280.8 362 48.9
Peaxi162Scf00146g00613 Petunia axillaris HOM05D003729 ORTHO05D004384 1.2e-73 280.8 357 49.9
Rhsim04G0111000 Rhododendron simsii HOM05D003729 ORTHO05D004384 1.6e-73 280.4 366 50.3
Gohir.A11G307900 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.8e-73 279.6 363 48.2
Duzib106G1244 Durio zibethinus HOM05D003729 ORTHO05D004384 4.7e-73 278.9 368 48.4
HanXRQChr12g0359771 Helianthus annuus HOM05D003729 ORTHO05D004384 1.4e-72 277.3 365 48.5
Prupe.5G014500 Prunus persica HOM05D003729 ORTHO05D004384 1.4e-72 277.3 365 48.8
CAN.G1099.5 Capsicum annuum HOM05D003729 ORTHO05D004384 1.8e-72 276.9 362 50.0
MBI04_g42401_MAGBIO Magnolia biondii HOM05D003729 ORTHO05D004384 4.0e-72 275.8 367 50.1
Gohir.D11G323300 Gossypium hirsutum HOM05D003729 ORTHO05D004384 8.9e-72 274.6 364 47.8
Gorai.007G353300 Gossypium raimondii HOM05D003729 ORTHO05D004384 8.9e-72 274.6 364 47.8
PGR031G2313 Punica granatum HOM05D003729 ORTHO05D004384 3.4e-71 272.7 357 49.9
Thecc.05G137800 Theobroma cacao HOM05D003729 ORTHO05D004384 3.4e-71 272.7 366 48.1
Atru.chr11.1446 Acer truncatum HOM05D003729 ORTHO05D004384 4.4e-71 272.3 367 48.2
Atru.chr11.1476 Acer truncatum HOM05D003729 ORTHO05D004384 4.4e-71 272.3 367 48.2
CsaV3_7G006250 Cucumis sativus L. HOM05D003729 ORTHO05D004384 5.8e-71 271.9 351 47.6
vmacro09025 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 2.2e-70 270.0 405 46.7
AUR62003735 Chenopodium quinoa HOM05D003729 ORTHO05D004384 2.9e-70 269.6 351 48.4
AUR62023904 Chenopodium quinoa HOM05D003729 ORTHO05D004384 3.7e-70 269.2 341 48.7
arahy.Tifrunner.gnm1.ann1.UC9EW5 Arachis hypogaea HOM05D003729 ORTHO05D004384 7.1e-69 265.0 356 48.6
Glyma.07G106900 Glycine max HOM05D003729 ORTHO05D004384 7.1e-69 265.0 360 47.8
SGA_v2.0_scaffold149G36565 Striga asiatica HOM05D003729 ORTHO05D004384 2.7e-68 263.1 364 47.8
THA.LOC104802558 Tarenaya hassleriana HOM05D003729 ORTHO05D004384 2.7e-68 263.1 355 47.6
Cfa020012 Carpinus fangiana HOM05D003729 ORTHO05D004384 4.6e-68 262.3 363 47.7
VMungo0464G0714 Vigna mungo HOM05D003729 ORTHO05D004384 1.3e-67 260.8 360 47.2
Phvul.004G146700 Phaseolus vulgaris HOM05D003729 ORTHO05D004384 1.7e-67 260.4 361 47.4
RcHm_v2.0_Chr6g0270881 Rosa chinensis HOM05D003729 ORTHO05D004384 2.3e-67 260.0 362 47.8
Glyma.09G171000 Glycine max HOM05D003729 ORTHO05D004384 3.0e-67 259.6 360 46.7
HPP92_002023 Vanilla planifolia HOM05D003729 ORTHO05D004384 3.0e-67 259.6 353 46.5
Lalb_Chr06g0173631 Lupinus albus HOM05D003729 ORTHO05D004384 5.1e-67 258.8 358 47.2
Lsat_1_v5_gn_5_75341 Lactuca sativa HOM05D003729 ORTHO05D004384 1.9e-66 256.9 367 45.8
arahy.Tifrunner.gnm1.ann1.HP2N24 Arachis hypogaea HOM05D003729 ORTHO05D004384 3.3e-66 256.1 356 47.5
Sed0006249 Sechium edule HOM05D003729 ORTHO05D004384 4.3e-66 255.8 350 46.6
Sabra16G0039300 Salix brachista HOM05D003729 ORTHO05D004384 5.6e-66 255.4 359 47.1
Aqoxy3G00221 Aquilegia oxysepala HOM05D003729 ORTHO05D004384 7.3e-66 255.0 359 46.0
Potri.016G037400 Populus trichocarpa HOM05D003729 ORTHO05D004384 7.3e-66 255.0 362 46.7
Sabra16G0044200 Salix brachista HOM05D003729 ORTHO05D004384 1.6e-65 253.8 359 46.8
Prupe.8G004300 Prunus persica HOM05D003729 ORTHO05D004384 4.7e-65 252.3 396 44.2
ATR0757G154 Amborella trichopoda HOM05D003729 ORTHO05D004384 6.2e-65 251.9 359 44.6
Ca_11233_v3 Cicer arietinum L. HOM05D003729 ORTHO05D004384 1.4e-64 250.8 358 45.8
Medtr2g081080 Medicago truncatula HOM05D003729 ORTHO05D004384 1.8e-64 250.4 358 46.1
PSO782G2431 Papaver somniferum HOM05D003729 ORTHO05D004384 2.4e-64 250.0 362 47.0
Psat5g246840 Pisum sativum HOM05D003729 ORTHO05D004384 2.4e-64 250.0 356 45.2
Aa31LG10G11890 Aethionema arabicum HOM05D003729 ORTHO05D004384 3.1e-64 249.6 368 45.9
FvH4_2g11640 Fragaria vesca HOM05D003729 ORTHO05D004384 1.2e-63 247.7 360 46.7
FAN15G2573 Fragaria x ananassa HOM05D003729 ORTHO05D004384 1.2e-63 247.7 360 46.7
FAN24G0230 Fragaria x ananassa HOM05D003729 ORTHO05D004384 1.2e-63 247.7 360 46.7
CARHR167140 Cardamine hirsuta HOM05D003729 ORTHO05D004384 5.8e-63 245.4 365 43.3
ECA234G1736 Erigeron canadensis HOM05D003729 ORTHO05D004384 1.3e-62 244.2 365 44.7
Carub.0005s2373 Capsella rubella HOM05D003729 ORTHO05D004384 3.8e-62 242.7 366 45.1
PSO478G2512 Papaver somniferum HOM05D003729 ORTHO05D004384 4.9e-62 242.3 362 45.6
TPR.G32867 Trifolium pratense HOM05D003729 ORTHO05D004384 1.9e-61 240.4 353 44.5
Lj1g0021267 Lotus japonicus HOM05D003729 ORTHO05D004384 3.2e-61 239.6 360 45.8
Lj6g0002169 Lotus japonicus HOM05D003729 ORTHO05D004384 4.1e-61 239.2 358 45.8
CANSAT64G1452 Cannabis sativa HOM05D003729 ORTHO05D004384 7.1e-61 238.4 362 46.1
Thhalv10005807m.g Eutrema salsugineum HOM05D003729 ORTHO05D004384 1.2e-60 237.7 367 43.6
SEGI_15849 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 6.0e-60 235.3 368 41.3
Sp5g05590 Schrenkiella parvula HOM05D003729 ORTHO05D004384 4.3e-58 229.2 366 42.6
AL5G38440 Arabidopsis lyrata HOM05D003729 ORTHO05D004384 5.6e-58 228.8 368 42.7
C08p32320 Brassica napus HOM05D003729 ORTHO05D004384 1.8e-56 223.8 362 43.1
Ciclev10027979m.g Citrus clementina HOM05D003729 ORTHO05D004384 1.8e-56 223.8 221 56.6
vmacro10990 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.8e-56 223.8 360 43.1
BcaC07g40019 Brassica carinata HOM05D003729 ORTHO05D004384 3.1e-56 223.0 362 43.1
BcaC08g44817 Brassica carinata HOM05D003729 ORTHO05D004384 3.1e-56 223.0 367 43.1
BolC6t37563H Brassica oleracea HOM05D003729 ORTHO05D004384 3.1e-56 223.0 367 43.1
BolC8t50846H Brassica oleracea HOM05D003729 ORTHO05D004384 6.9e-56 221.9 362 42.8
A07p23200 Brassica napus HOM05D003729 ORTHO05D004384 2.6e-55 219.9 366 42.9
BraA07t29984Z Brassica rapa HOM05D003729 ORTHO05D004384 2.6e-55 219.9 366 42.9
BcaC07g40088 Brassica carinata HOM05D003729 ORTHO05D004384 9.9e-55 218.0 366 42.3
C06p24040 Brassica napus HOM05D003729 ORTHO05D004384 1.7e-54 217.2 365 42.5
A09p49920 Brassica napus HOM05D003729 ORTHO05D004384 4.9e-54 215.7 365 42.2
BraA09t40443Z Brassica rapa HOM05D003729 ORTHO05D004384 4.9e-54 215.7 365 42.2
SMO334G0073 Selaginella moellendorffii HOM05D003729 ORTHO05D004384 2.4e-53 213.4 350 41.4
Mapoly0009s0077 Marchantia polymorpha HOM05D003729 ORTHO05D004384 4.3e-50 202.6 386 37.3
Sc13g0001200 Simmondsia chinensis HOM05D003729 ORTHO05D004384 2.8e-49 199.9 204 55.4
Zm00001eb373800 Zea mays HOM05D003729 ORTHO05D004384 3.2e-45 186.4 358 37.2
Zm00001eb378550 Zea mays HOM05D003729 ORTHO05D004384 5.4e-45 185.7 358 37.2
AagrBONN_evm.TU.Sc2ySwM_228.5647 Anthoceros agrestis HOM05D003729 ORTHO05D004384 3.5e-44 183.0 365 35.6
Pp3c18_60 Physcomitrium patens HOM05D003729 ORTHO05D004384 7.9e-44 181.8 358 36.9
AT3G56990 Arabidopsis thaliana HOM05D003729 ORTHO05D004384 3.0e-43 179.9 204 53.4
Lj1A1094G14 Lonicera japonica HOM05D003729 ORTHO05D004384 3.3e-42 176.4 249 49.0
MELO3C018665.2 Cucumis melo HOM05D003729 ORTHO05D004384 1.1e-37 161.4 238 45.0
SHI43747 Sapria himalayana HOM05D003729 ORTHO05D004384 1.9e-37 160.6 191 47.6
CBR_g12410 Chara braunii HOM05D003729 ORTHO05D004384 1.6e-36 157.5 370 31.9
Haze_16229 Corylus avellana HOM05D003729 ORTHO05D004384 7.4e-34 148.7 257 44.0
Lj1A1094G13 Lonicera japonica HOM05D003729 ORTHO05D004384 3.7e-33 146.4 108 65.7
Thecc.05G138100 Theobroma cacao HOM05D003729 ORTHO05D004384 4.8e-33 146.0 131 58.0
Haze_20214 Corylus avellana HOM05D003729 ORTHO05D004384 2.0e-31 140.6 262 42.0
AUR62016564 Chenopodium quinoa HOM05D003729 ORTHO05D004384 2.6e-31 140.2 303 38.6
MD06G1011700 Malus domestica HOM05D003729 ORTHO05D004384 7.6e-31 138.7 140 53.6
Haze_20210 Corylus avellana HOM05D003729 ORTHO05D004384 2.9e-30 136.7 257 40.9
MCO06G073 Micromonas commoda HOM05D003729 ORTHO05D004384 1.6e-28 131.0 374 29.7
Thecc.05G137400 Theobroma cacao HOM05D003729 ORTHO05D004384 3.5e-28 129.8 110 57.3
Cre03.g159950 Chlamydomonas reinhardtii HOM05D003729 ORTHO05D004384 5.7e-26 122.5 238 33.6
Haze_20209 Corylus avellana HOM05D003729 ORTHO05D004384 1.6e-25 120.9 87 66.7
Haze_20213 Corylus avellana HOM05D003729 ORTHO05D004384 4.8e-25 119.4 87 65.5
vmacro12362 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.1e-24 118.2 79 67.1
Haze_16230 Corylus avellana HOM05D003729 ORTHO05D004384 2.4e-24 117.1 79 67.1
SHI42965 Sapria himalayana HOM05D003729 ORTHO05D004384 1.5e-23 114.4 221 38.0
SHI44105 Sapria himalayana HOM05D003729 ORTHO05D004384 2.0e-23 114.0 103 51.5
Thecc.05G137500 Theobroma cacao HOM05D003729 ORTHO05D004384 4.5e-23 112.8 228 41.2
SHI45339 Sapria himalayana HOM05D003729 ORTHO05D004384 5.9e-23 112.5 93 57.0
Rhsim06G0100100 Rhododendron simsii HOM05D003729 ORTHO05D004384 2.2e-22 110.5 87 63.2
SHI40172 Sapria himalayana HOM05D003729 ORTHO05D004384 3.8e-22 109.8 246 35.0
Oeu029504.1 Olea europaea HOM05D003729 ORTHO05D004384 5.0e-22 109.4 85 74.1
PRCOL_00000752 Prasinoderma coloniale HOM05D003729 ORTHO05D004384 6.5e-22 109.0 207 31.4
Os06g0128400 Oryza sativa ssp. japonica HOM05D003729 ORTHO05D004384 1.9e-21 107.5 113 46.0
Gohir.A07G111501 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.1e-20 104.0 89 57.3
Gohir.D02G195125 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.1e-20 104.0 89 57.3
Gohir.D06G065600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.1e-20 104.0 89 57.3
Gohir.D05G190600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 6.1e-20 102.4 81 60.5
Cfa025239 Carpinus fangiana HOM05D003729 ORTHO05D004384 4.8e-17 92.8 260 29.2
Gorai.004G004200 Gossypium raimondii HOM05D003729 ORTHO05D004384 2.4e-16 90.5 104 51.0
BcaB02g07627 Brassica carinata HOM05D003729 ORTHO05D004384 6.5e-14 82.4 195 35.9
Hund24619 Selenicereus undatus HOM05D003729 ORTHO05D004384 2.1e-12 77.4 150 38.7
Atru.chr1.117 Acer truncatum HOM05D003729 ORTHO05D004384 7.9e-12 75.5 189 36.5
SHI46975 Sapria himalayana HOM05D003729 ORTHO05D004384 6.7e-11 72.4 87 47.1
SHI49946 Sapria himalayana HOM05D003729 ORTHO05D004384 1.5e-07 61.2 112 36.6
SHI50318 Sapria himalayana HOM05D003729 ORTHO05D004384 5.9e-07 59.3 156 35.3


User provided reference genes

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