Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058850.1 Olea europaea HOM05D003674 ORTHO05D004226 1.1e-237 826.2 438 100.0
Oeu017490.2 Olea europaea HOM05D003674 ORTHO05D004226 7.5e-197 690.6 417 82.5
MSTRG.14342 Avicennia marina HOM05D003674 ORTHO05D004226 2.3e-193 679.1 417 81.3
Dinv23635 Davidia involucrata HOM05D003674 ORTHO05D004226 1.5e-189 666.4 417 79.4
Cc05_g07170 Coffea canephora HOM05D003674 ORTHO05D004226 1.7e-188 662.9 417 79.4
CSS0035927 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 3.5e-186 655.2 417 77.5
TAR624G0345 Trochodendron aralioides HOM05D003674 ORTHO05D004226 3.9e-185 651.7 417 77.0
Manes.13G146400 Manihot esculenta HOM05D003674 ORTHO05D004226 5.1e-185 651.4 417 81.8
Actinidia11076 Actinidia chinensis HOM05D003674 ORTHO05D004226 9.5e-184 647.1 417 77.7
Duzib132G0159 Durio zibethinus HOM05D003674 ORTHO05D004226 2.4e-182 642.5 416 80.5
unitig_749.g13960 Utricularia gibba HOM05D003674 ORTHO05D004226 5.2e-182 641.3 418 74.6
Thecc.02G180000 Theobroma cacao HOM05D003674 ORTHO05D004226 1.2e-181 640.2 417 80.8
Solyc07g053970.3 Solanum lycopersicum HOM05D003674 ORTHO05D004226 1.5e-181 639.8 417 75.8
CAN.G248.4 Capsicum annuum HOM05D003674 ORTHO05D004226 2.6e-181 639.0 417 74.8
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 2.6e-181 639.0 417 75.8
CiPaw.03G177300 Carya illinoinensis HOM05D003674 ORTHO05D004226 4.4e-181 638.3 417 76.0
Ciclev10014388m.g Citrus clementina HOM05D003674 ORTHO05D004226 4.4e-181 638.3 417 75.3
Peaxi162Scf00132g00119 Petunia axillaris HOM05D003674 ORTHO05D004226 9.9e-181 637.1 417 75.5
SalBow1G0286 Salvia bowleyana HOM05D003674 ORTHO05D004226 9.9e-181 637.1 418 75.4
SGA_v2.0_scaffold322G48614 Striga asiatica HOM05D003674 ORTHO05D004226 1.7e-180 636.3 425 77.2
Actinidia11032 Actinidia chinensis HOM05D003674 ORTHO05D004226 2.2e-180 636.0 417 76.0
RcHm_v2.0_Chr2g0126531 Rosa chinensis HOM05D003674 ORTHO05D004226 3.8e-180 635.2 417 75.8
MELO3C018734.2 Cucumis melo HOM05D003674 ORTHO05D004226 1.1e-179 633.6 417 77.9
TWI75G1008 Tripterygium wilfordii HOM05D003674 ORTHO05D004226 1.1e-179 633.6 417 74.6
Migut.H01178 Erythranthe guttata HOM05D003674 ORTHO05D004226 1.9e-179 632.9 417 83.2
RcHm_v2.0_Chr2g0126551 Rosa chinensis HOM05D003674 ORTHO05D004226 2.4e-179 632.5 416 75.2
Cfa014617 Carpinus fangiana HOM05D003674 ORTHO05D004226 4.2e-179 631.7 417 79.6
CsaV3_7G004450 Cucumis sativus L. HOM05D003674 ORTHO05D004226 7.1e-179 630.9 417 77.5
Potri.013G131100 Populus trichocarpa HOM05D003674 ORTHO05D004226 2.7e-178 629.0 417 79.6
FvH4_6g26210 Fragaria vesca HOM05D003674 ORTHO05D004226 4.6e-178 628.2 417 74.3
SalBow1G3138 Salvia bowleyana HOM05D003674 ORTHO05D004226 4.6e-178 628.2 430 73.0
Sc12g0003090 Simmondsia chinensis HOM05D003674 ORTHO05D004226 1.3e-177 626.7 417 74.6
Lalb_Chr22g0356561 Lupinus albus HOM05D003674 ORTHO05D004226 2.3e-177 625.9 416 72.6
Sed0011332 Sechium edule HOM05D003674 ORTHO05D004226 5.1e-177 624.8 417 72.9
GSVIVG01020549001 Vitis vinifera HOM05D003674 ORTHO05D004226 8.7e-177 624.0 419 73.7
CSS0005418 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 1.1e-176 623.6 417 81.8
COL.COLO4_30194 Corchorus olitorius HOM05D003674 ORTHO05D004226 1.5e-176 623.2 419 73.5
MD17G1240200 Malus domestica HOM05D003674 ORTHO05D004226 1.9e-176 622.9 417 73.4
Nitab4.5_0000512g0020 Nicotiana tabacum HOM05D003674 ORTHO05D004226 1.9e-176 622.9 450 70.4
QL08p038784 Quercus lobata HOM05D003674 ORTHO05D004226 3.3e-176 622.1 444 75.9
Gohir.A03G156500 Gossypium hirsutum HOM05D003674 ORTHO05D004226 9.6e-176 620.5 416 78.1
Gorai.005G201400 Gossypium raimondii HOM05D003674 ORTHO05D004226 2.1e-175 619.4 416 78.1
QL08p038841 Quercus lobata HOM05D003674 ORTHO05D004226 2.8e-175 619.0 452 74.3
arahy.Tifrunner.gnm1.ann1.1TZ75T Arachis hypogaea HOM05D003674 ORTHO05D004226 2.4e-174 615.9 417 71.2
Oeu017491.1 Olea europaea HOM05D003674 ORTHO05D004226 5.3e-174 614.8 417 77.2
DCAR_021245 Daucus carota HOM05D003674 ORTHO05D004226 9.9e-173 610.5 417 73.6
Haze_13165 Corylus avellana HOM05D003674 ORTHO05D004226 6.4e-172 607.8 440 75.5
MD09G1247300 Malus domestica HOM05D003674 ORTHO05D004226 1.1e-171 607.1 417 71.2
HanXRQChr10g0297111 Helianthus annuus HOM05D003674 ORTHO05D004226 1.9e-171 606.3 416 72.6
Lsat_1_v5_gn_4_66721 Lactuca sativa HOM05D003674 ORTHO05D004226 2.4e-171 605.9 416 72.6
Aa31LG5G2940 Aethionema arabicum HOM05D003674 ORTHO05D004226 7.1e-171 604.4 417 73.4
Glyma.13G296900 Glycine max HOM05D003674 ORTHO05D004226 1.2e-170 603.6 416 71.4
Glyma.12G204400 Glycine max HOM05D003674 ORTHO05D004226 6.0e-170 601.3 416 71.2
arahy.Tifrunner.gnm1.ann1.1DM7TY Arachis hypogaea HOM05D003674 ORTHO05D004226 7.8e-170 600.9 446 66.6
EL10Ac9g20767 Beta vulgaris HOM05D003674 ORTHO05D004226 7.8e-170 600.9 417 71.5
Sp6g03570 Schrenkiella parvula HOM05D003674 ORTHO05D004226 1.7e-169 599.7 417 70.7
BcaB01g02542 Brassica carinata HOM05D003674 ORTHO05D004226 2.3e-169 599.4 417 71.9
AL6G49310 Arabidopsis lyrata HOM05D003674 ORTHO05D004226 3.9e-169 598.6 417 69.5
ECA234G3736 Erigeron canadensis HOM05D003674 ORTHO05D004226 6.6e-169 597.8 418 70.8
BcaC04g23961 Brassica carinata HOM05D003674 ORTHO05D004226 8.7e-169 597.4 417 71.9
A03p30360 Brassica napus HOM05D003674 ORTHO05D004226 8.7e-169 597.4 417 72.2
BolC9t53217H Brassica oleracea HOM05D003674 ORTHO05D004226 8.7e-169 597.4 417 71.9
THA.LOC104826033 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 8.7e-169 597.4 417 69.5
A09p02830 Brassica napus HOM05D000230 ORTHO05D000176 1.1e-168 597.0 417 71.9
BraA09t35927Z Brassica rapa HOM05D003674 ORTHO05D004226 1.1e-168 597.0 417 71.9
BcaC01g06668 Brassica carinata HOM05D003674 ORTHO05D004226 2.5e-168 595.9 417 71.9
C03p36660 Brassica napus HOM05D003674 ORTHO05D004226 2.5e-168 595.9 417 71.9
BolC3t15980H Brassica oleracea HOM05D003674 ORTHO05D004226 2.5e-168 595.9 417 71.9
BraA03t12218Z Brassica rapa HOM05D003674 ORTHO05D004226 2.5e-168 595.9 417 71.9
Carub.0006s3351 Capsella rubella HOM05D003674 ORTHO05D004226 7.3e-168 594.3 417 71.5
CARHR251990 Cardamine hirsuta HOM05D003674 ORTHO05D004226 7.3e-168 594.3 417 71.7
AT4G03560 Arabidopsis thaliana HOM05D003674 ORTHO05D004226 1.6e-167 593.2 417 71.5
HPP92_008135 Vanilla planifolia HOM05D003674 ORTHO05D004226 3.6e-167 592.0 417 74.6
Eucgr.K01030 Eucalyptus grandis HOM05D003674 ORTHO05D004226 1.1e-166 590.5 417 77.2
Aqoxy4G00814 Aquilegia oxysepala HOM05D003674 ORTHO05D004226 3.1e-166 589.0 416 70.0
THA.LOC104801172 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 4.0e-166 588.6 441 66.7
DCAR_019181 Daucus carota HOM05D003674 ORTHO05D004226 1.5e-165 586.6 416 73.3
PGR142G3148 Punica granatum HOM05D003674 ORTHO05D004226 2.6e-165 585.9 417 77.7
Rhsim06G0142000 Rhododendron simsii HOM05D003674 ORTHO05D004226 3.4e-165 585.5 388 74.5
Eucgr.K01029 Eucalyptus grandis HOM05D003674 ORTHO05D004226 4.5e-165 585.1 417 76.7
Lj3g0012901 Lotus japonicus HOM05D003674 ORTHO05D004226 1.7e-164 583.2 417 69.5
Eucgr.K01031 Eucalyptus grandis HOM05D003674 ORTHO05D004226 2.2e-164 582.8 417 76.5
VMungo0464G1662 Vigna mungo HOM05D003674 ORTHO05D004226 2.2e-164 582.8 416 69.7
BcaB01g01906 Brassica carinata HOM05D003674 ORTHO05D004226 2.4e-163 579.3 417 68.1
CSS0020583 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 3.2e-163 578.9 417 78.2
Nitab4.5_0004344g0030 Nicotiana tabacum HOM05D003674 ORTHO05D004226 4.2e-163 578.6 392 74.2
Phvul.004G108300 Phaseolus vulgaris HOM05D003674 ORTHO05D004226 4.2e-163 578.6 416 69.0
Psat5g272320 Pisum sativum HOM05D003674 ORTHO05D004226 4.6e-162 575.1 417 67.9
Cpa.g.sc848.1 Carica papaya HOM05D003674 ORTHO05D004226 7.9e-162 574.3 388 71.9
TPR.G6424 Trifolium pratense HOM05D003674 ORTHO05D004226 7.9e-162 574.3 417 68.3
ClCG07G002890 Citrullus lanatus HOM05D003674 ORTHO05D004226 5.1e-161 571.6 390 75.9
FAN09G3196 Fragaria x ananassa HOM05D000230 ORTHO05D004226 2.5e-160 569.3 390 72.8
Medtr2g090380 Medicago truncatula HOM05D003674 ORTHO05D004226 5.6e-160 568.2 418 68.2
Zm00001eb360320 Zea mays HOM05D003674 ORTHO05D004226 8.1e-159 564.3 417 66.2
Thhalv10029480m.g Eutrema salsugineum HOM05D003674 ORTHO05D004226 1.1e-158 563.9 395 72.2
Os01g0678500 Oryza sativa ssp. japonica HOM05D003674 ORTHO05D004226 1.1e-158 563.9 417 65.9
PSO210G7128 Papaver somniferum HOM05D003674 ORTHO05D004226 1.8e-158 563.1 420 66.2
PSO832G0572 Papaver somniferum HOM05D003674 ORTHO05D004226 3.4e-157 558.9 420 65.7
HanXRQChr06g0179591 Helianthus annuus HOM05D003674 ORTHO05D004226 6.0e-154 548.1 416 65.9
QL08p038913 Quercus lobata HOM05D003674 ORTHO05D004226 1.3e-151 540.4 525 61.3
MBI06_g04180_MAGBIO Magnolia biondii HOM05D003674 ORTHO05D004226 2.4e-150 536.2 389 70.2
Sabra13G0110700 Salix brachista HOM05D003674 ORTHO05D004226 5.3e-150 535.0 430 64.7
FAN05G0320 Fragaria x ananassa HOM05D000230 ORTHO05D000176 3.4e-149 532.3 408 67.2
DCAR_013011 Daucus carota HOM05D003674 ORTHO05D004226 1.0e-148 530.8 416 64.9
CAN.G1472.4 Capsicum annuum HOM05D003674 ORTHO05D004226 1.4e-147 526.9 417 63.5
DCAR_013010 Daucus carota HOM05D003674 ORTHO05D004226 8.7e-145 517.7 421 62.9
Prupe.3G138600 Prunus persica HOM05D003674 ORTHO05D004226 5.9e-141 505.0 416 61.8
CiPaw.04G126100 Carya illinoinensis HOM05D003674 ORTHO05D004226 2.9e-140 502.7 309 79.3
Hund01095 Selenicereus undatus HOM05D003674 ORTHO05D004226 1.1e-139 500.7 419 60.6
PSO675G3793 Papaver somniferum HOM05D003674 ORTHO05D004226 1.4e-139 500.4 417 61.2
AUR62037356 Chenopodium quinoa HOM05D003674 ORTHO05D004226 1.2e-138 497.3 419 60.9
vmacro12305 Vaccinium macrocarpon HOM05D003674 ORTHO05D004226 1.2e-138 497.3 419 62.8
Mapoly0002s0274 Marchantia polymorpha HOM05D003674 ORTHO05D004226 8.8e-137 491.1 417 56.8
Sabra13G0110800 Salix brachista HOM05D003674 ORTHO05D004226 4.3e-136 488.8 441 59.2
Pp3c15_12230 Physcomitrium patens HOM05D003674 ORTHO05D004226 4.5e-133 478.8 416 56.5
Peaxi162Scf00132g00117 Petunia axillaris HOM05D003674 ORTHO05D004226 1.0e-129 467.6 431 57.5
Ah.01g004260 Amaranthus hybridus HOM05D003674 ORTHO05D004226 1.8e-129 466.8 428 59.3
Pp3c1_6270 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.8e-129 466.8 416 57.0
Pp3c1_6272 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.8e-129 466.8 416 57.0
TAR624G0173 Trochodendron aralioides HOM05D003674 ORTHO05D004226 2.4e-126 456.4 298 73.8
AagrBONN_evm.TU.Sc2ySwM_344.5080 Anthoceros agrestis HOM05D003674 ORTHO05D004226 1.0e-124 451.1 418 52.9
FAN02G2237 Fragaria x ananassa HOM05D003674 ORTHO05D004226 2.9e-124 449.5 362 64.6
AUR62042592 Chenopodium quinoa HOM05D003674 ORTHO05D004226 1.1e-107 394.4 356 58.4
MSTRG.14332 Avicennia marina HOM05D003674 ORTHO05D004226 8.0e-90 335.1 223 73.1
Ca_01498_v3 Cicer arietinum L. HOM05D003674 ORTHO05D004226 1.0e-89 334.7 232 70.7
Gohir.D02G179632 Gossypium hirsutum HOM05D003674 ORTHO05D004226 7.3e-75 285.4 209 69.4
Gohir.D02G179566 Gossypium hirsutum HOM05D003674 ORTHO05D004226 1.1e-73 281.6 190 80.5
ATR0737G001 Amborella trichopoda HOM05D003674 ORTHO05D004226 3.4e-72 276.6 183 74.9
Nn1g06550 Nelumbo nucifera HOM05D003674 ORTHO05D004226 7.6e-72 275.4 172 79.1
Hma1.2p1_2586F.1_g324940 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 2.1e-69 267.3 166 77.1
Nn1g06551 Nelumbo nucifera HOM05D003674 ORTHO05D004226 1.5e-59 234.6 138 83.3
Oeu010988.1 Olea europaea HOM05D003674 ORTHO05D004226 4.6e-53 213.0 125 83.2
Lsat_1_v5_gn_4_64281 Lactuca sativa HOM05D003674 ORTHO05D004226 1.0e-52 211.8 159 61.6
Pp3c1_28370 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.7e-52 211.1 418 33.5
Pp3c14_20770 Physcomitrium patens HOM05D003674 ORTHO05D004226 2.3e-52 210.7 416 32.0
Pp3c18_10190 Physcomitrium patens HOM05D003674 ORTHO05D004226 3.3e-51 206.8 412 31.3
Pp3c2_10230 Physcomitrium patens HOM05D003674 ORTHO05D004226 7.3e-51 205.7 419 32.9
Hma1.2p1_1937F.1_g308270 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 4.8e-50 203.0 117 83.8
Pp3c19_18680 Physcomitrium patens HOM05D003674 ORTHO05D004226 4.8e-50 203.0 406 30.8
Hma1.2p1_1836F.1_g304720 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 1.8e-49 201.1 119 83.2
MSTRG.14334 Avicennia marina HOM05D003674 ORTHO05D004226 9.9e-48 195.3 117 82.1
MSTRG.14335 Avicennia marina HOM05D003674 ORTHO05D004226 4.9e-47 193.0 126 75.4
TAR624G0523 Trochodendron aralioides HOM05D003674 ORTHO05D004226 4.2e-46 189.9 115 80.9
Pp3c21_11410 Physcomitrium patens HOM05D003674 ORTHO05D004226 2.7e-45 187.2 410 30.0
Mapoly0062s0036 Marchantia polymorpha HOM05D003674 ORTHO05D004226 2.8e-42 177.2 414 29.5
Pp3c3_16950 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.3e-39 168.3 408 28.4
Mapoly0050s0061 Marchantia polymorpha HOM05D003674 ORTHO05D004226 4.2e-38 163.3 426 30.3
MSTRG.14339 Avicennia marina HOM05D003674 ORTHO05D004226 1.2e-37 161.8 91 86.8
Nitab4.5_0012835g0020 Nicotiana tabacum HOM05D003674 ORTHO05D004226 2.8e-34 150.6 149 53.0
SHI10399 Sapria himalayana HOM05D003674 ORTHO05D004226 2.4e-33 147.5 284 35.6
CBR_g54426 Chara braunii HOM05D003674 ORTHO05D004226 2.6e-32 144.1 257 32.3
Nn1g06549 Nelumbo nucifera HOM05D003674 ORTHO05D004226 3.4e-32 143.7 108 64.8
Ca_01497_v3 Cicer arietinum L. HOM05D003674 ORTHO05D004226 7.6e-32 142.5 162 49.4
CiPaw.04G126200 Carya illinoinensis HOM05D003674 ORTHO05D004226 3.5e-29 133.7 74 82.4
SHI10401 Sapria himalayana HOM05D003674 ORTHO05D004226 1.8e-28 131.3 113 62.8
ATR0737G184 Amborella trichopoda HOM05D003674 ORTHO05D004226 2.2e-26 124.4 74 74.3
SEGI_23599 Sequoiadendron giganteum HOM05D003674 ORTHO05D004226 9.0e-25 119.0 87 60.9
SHI10406 Sapria himalayana HOM05D003674 ORTHO05D004226 8.5e-23 112.5 80 71.2
Hma1.2p1_1145F.1_g261410 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 9.4e-22 109.0 56 91.1
Nitab4.5_0000638g0280 Nicotiana tabacum HOM05D003674 ORTHO05D004226 8.8e-20 102.4 147 43.5
CDE06G1319 Ceratophyllum demersum HOM05D003674 ORTHO05D004226 3.3e-19 100.5 56 80.4
Hma1.2p1_1145F.1_g261420 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 3.3e-19 100.5 63 74.6
CDE08G1051 Ceratophyllum demersum HOM05D003674 ORTHO05D004226 1.1e-17 95.5 52 78.8
CBR_g41145 Chara braunii HOM05D003674 ORTHO05D004226 4.1e-17 93.6 167 29.3
SHI10407 Sapria himalayana HOM05D003674 ORTHO05D004226 6.5e-15 86.3 49 81.6
SEGI_04644 Sequoiadendron giganteum HOM05D003674 ORTHO05D004226 3.0e-12 77.4 71 52.1
BcaC01g01194 Brassica carinata HOM05D003674 ORTHO05D004226 1.1e-09 68.9 54 59.3
MSTRG.14337 Avicennia marina HOM05D003674 ORTHO05D004226 1.8e-09 68.2 30 93.3
MCO14G402 Micromonas commoda HOM05D009333 ORTHO05D011489 1.0e-07 62.4 327 23.2
Nitab4.5_0012835g0030 Nicotiana tabacum HOM05D003674 ORTHO05D004226 2.2e-07 61.2 49 61.2
PRCOL_00001301 Prasinoderma coloniale HOM05D009333 ORTHO05D011489 5.0e-07 60.1 278 23.0
PRCOL_00003146 Prasinoderma coloniale HOM05D009333 ORTHO05D011489 1.9e-06 58.2 223 24.2


User provided reference genes

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