Gene: Solyc07g053970.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g053970.3
  • Transcript Identifier Solyc07g053970.3.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 62285657-62306051 : negative

Gene Family Information

  • ID HOM05D003674
  • #Genes/#Species 187/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g053970.3.1
  • uniprot A0A3Q7HFE2
  • gene_id Solyc07g053970

Descriptions

  • Description Two pore calcium channel protein 1 (AHRD V3.3 *** A0A1U8HHX4_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT4G03560
GO:0019722
ISO
PLAZA Integrative Orthologycalcium-mediated signaling AT4G03560
GO:0010119
ISO
PLAZA Integrative Orthologyregulation of stomatal movement AT4G03560
GO:0080141
ISO
PLAZA Integrative Orthologyregulation of jasmonic acid biosynthetic process AT4G03560
GO:0006816
IBA
GOA Databasecalcium ion transport
GO:0006811
IEA
GOA Databaseion transport
GO:0006811
IEA
InterProion transport
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0034765
IEA
GOA Databaseregulation of ion transmembrane transport
GO:0034220
IEA
GOA Databaseion transmembrane transport
GO:0070588
IEA
GOA Databasecalcium ion transmembrane transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005245
IBA
IEA
GOA Databasevoltage-gated calcium channel activity
GO:0005245
IEA
InterProvoltage-gated calcium channel activity
GO:0005262
ISO
PLAZA Integrative Orthologycalcium channel activity AT4G03560
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT4G03560
GO:0005216
IEA
GOA Databaseion channel activity
GO:0005216
IEA
InterProion channel activity
GO:0005509
IEA
GOA Databasecalcium ion binding
GO:0005509
IEA
InterProcalcium ion binding
GO:0005244
IEA
GOA Databasevoltage-gated ion channel activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G03560
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G03560
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT4G03560
GO:0000325
IBA
GOA Databaseplant-type vacuole
GO:0005774
IBA
GOA Databasevacuolar membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005821 Ion transport domain
IPR002048 EF-hand domain
IPR044581 Two pore calcium channel protein 1, plant
IPR011992 EF-hand domain pair
IPR027359 Voltage-dependent channel domain superfamily
Mapman id Description
24.3.2.1 Solute transport.channels.VIC superfamily.voltage-gated calcium cation channel (TPC)