Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058502.1 Olea europaea HOM05D000138 ORTHO05D000078 4.2e-133 478.0 241 100.0
Oeu058501.1 Olea europaea HOM05D000138 ORTHO05D000078 3.3e-109 398.7 414 57.7
Oeu058504.1 Olea europaea HOM05D000138 ORTHO05D000078 3.3e-109 398.7 414 57.7
CAN.G1839.10 Capsicum annuum HOM05D000138 ORTHO05D000078 5.2e-22 109.0 176 42.0
PGSC0003DMG400025390 Solanum tuberosum HOM05D000138 ORTHO05D000078 8.8e-22 108.2 161 46.0
Cc01_g11840 Coffea canephora HOM05D000138 ORTHO05D000078 7.4e-21 105.1 153 47.7
Solyc11g072600.3 Solanum lycopersicum HOM05D000138 ORTHO05D000078 7.4e-21 105.1 161 45.3
Sopen11g030250 Solanum pennellii HOM05D000138 ORTHO05D000078 9.7e-21 104.8 154 46.8
CSS0041049 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 1.7e-20 104.0 161 44.7
Solyc06g075510.4 Solanum lycopersicum HOM05D000138 ORTHO05D000078 2.2e-20 103.6 157 44.6
CAN.G84.33 Capsicum annuum HOM05D000138 ORTHO05D000078 3.7e-20 102.8 187 39.6
Nitab4.5_0000270g0090 Nicotiana tabacum HOM05D000138 ORTHO05D000078 3.7e-20 102.8 212 38.2
Sopen06g031890 Solanum pennellii HOM05D000138 ORTHO05D000078 6.3e-20 102.1 157 43.9
PGSC0003DMG400006604 Solanum tuberosum HOM05D000138 ORTHO05D000078 3.1e-19 99.8 178 41.0
Dinv32815 Davidia involucrata HOM05D000138 ORTHO05D000078 4.1e-19 99.4 160 44.4
Peaxi162Scf00389g00028 Petunia axillaris HOM05D000138 ORTHO05D000078 9.1e-19 98.2 193 40.4
vmacro03145 Vaccinium macrocarpon HOM05D000138 ORTHO05D000078 1.2e-18 97.8 180 42.8
Nitab4.5_0000372g0010 Nicotiana tabacum HOM05D000138 ORTHO05D000078 1.0e-17 94.7 214 36.9
Rhsim13G0090400 Rhododendron simsii HOM05D000138 ORTHO05D000078 5.0e-17 92.4 170 41.8
RhsimUnG0139000 Rhododendron simsii HOM05D000138 ORTHO05D000078 5.0e-17 92.4 170 41.8
Actinidia37282 Actinidia chinensis HOM05D000138 ORTHO05D000078 3.2e-16 89.7 154 43.5
Peaxi162Scf00072g00229 Petunia axillaris HOM05D000138 ORTHO05D000078 7.2e-16 88.6 210 36.7
Dinv06353 Davidia involucrata HOM05D000138 ORTHO05D000078 9.4e-16 88.2 145 44.1
GSVIVG01025100001 Vitis vinifera HOM05D000138 ORTHO05D000078 1.6e-15 87.4 153 41.2
QL01p035865 Quercus lobata HOM05D000138 ORTHO05D000078 1.4e-14 84.3 172 39.0
CSS0037440 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 5.2e-14 82.4 169 38.5
Hma1.2p1_1731F.1_g299760 Hydrangea macrophylla HOM05D000138 ORTHO05D000078 6.7e-14 82.0 156 40.4
Nitab4.5_0000533g0010 Nicotiana tabacum HOM05D000138 ORTHO05D000078 8.8e-14 81.6 161 36.6
Nitab4.5_0000888g0030 Nicotiana tabacum HOM05D000138 ORTHO05D000078 8.8e-14 81.6 156 39.7
Atru.chr3.3739 Acer truncatum HOM05D000138 ORTHO05D000078 1.5e-13 80.9 157 42.0
Manes.04G027000 Manihot esculenta HOM05D000138 ORTHO05D000078 2.6e-13 80.1 151 41.7
Manes.11G139300 Manihot esculenta HOM05D000138 ORTHO05D000078 2.6e-13 80.1 156 42.9
Nn2g12971 Nelumbo nucifera HOM05D000138 ORTHO05D000078 2.6e-13 80.1 159 39.0
SalBow3G2198 Salvia bowleyana HOM05D000138 ORTHO05D000078 2.6e-13 80.1 164 40.9
TAR636G0276 Trochodendron aralioides HOM05D000138 ORTHO05D000078 5.7e-13 79.0 155 40.0
Prupe.6G091100 Prunus persica HOM05D000138 ORTHO05D000078 7.5e-13 78.6 153 39.9
MD03G1107900 Malus domestica HOM05D000138 ORTHO05D000078 9.7e-13 78.2 170 37.1
Ciclev10028259m.g Citrus clementina HOM05D000138 ORTHO05D000078 1.1e-11 74.7 167 36.5
Rhsim01G0221900 Rhododendron simsii HOM05D000138 ORTHO05D000078 1.1e-11 74.7 157 38.2
Glyma.12G073300 Glycine max HOM05D000138 ORTHO05D000078 1.4e-11 74.3 152 36.2
Haze_23954 Corylus avellana HOM05D000138 ORTHO05D000078 1.8e-11 73.9 155 38.7
Glyma.15G044400 Glycine max HOM05D000138 ORTHO05D000078 1.8e-11 73.9 164 37.2
arahy.Tifrunner.gnm1.ann1.KDI7TH Arachis hypogaea HOM05D000138 ORTHO05D000078 2.4e-11 73.6 151 37.7
arahy.Tifrunner.gnm1.ann1.YSN9W3 Arachis hypogaea HOM05D000138 ORTHO05D000078 2.4e-11 73.6 151 37.7
FAN25G3461 Fragaria x ananassa HOM05D000138 ORTHO05D000078 2.4e-11 73.6 156 36.5
MD11G1121200 Malus domestica HOM05D000138 ORTHO05D000078 2.4e-11 73.6 151 38.4
DCAR_018848 Daucus carota HOM05D000138 ORTHO05D000078 3.1e-11 73.2 155 38.7
MSTRG.21157 Avicennia marina HOM05D000138 ORTHO05D000078 4.1e-11 72.8 99 45.5
FAN11G1484 Fragaria x ananassa HOM05D000138 ORTHO05D000078 4.1e-11 72.8 156 35.9
FAN21G2106 Fragaria x ananassa HOM05D000138 ORTHO05D000078 4.1e-11 72.8 170 34.7
COL.COLO4_18384 Corchorus olitorius HOM05D000138 ORTHO05D000078 5.3e-11 72.4 155 36.8
Dinv31370 Davidia involucrata HOM05D000138 ORTHO05D000078 7.0e-11 72.0 158 36.7
FvH4_3g33940 Fragaria vesca HOM05D000138 ORTHO05D000078 1.2e-10 71.2 156 35.9
TAR633G2276 Trochodendron aralioides HOM05D000138 ORTHO05D000078 1.2e-10 71.2 173 35.8
RcHm_v2.0_Chr5g0061491 Rosa chinensis HOM05D000138 ORTHO05D000078 1.6e-10 70.9 170 35.3
CiPaw.14G076000 Carya illinoinensis HOM05D000138 ORTHO05D000078 2.0e-10 70.5 197 36.0
Ca_19231_v3 Cicer arietinum L. HOM05D000138 ORTHO05D000078 2.0e-10 70.5 216 33.3
Lalb_Chr14g0374861 Lupinus albus HOM05D000138 ORTHO05D000078 2.7e-10 70.1 147 39.5
Lalb_Chr24g0394401 Lupinus albus HOM05D000138 ORTHO05D000078 3.5e-10 69.7 187 36.9
Phvul.L000308 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 3.5e-10 69.7 156 37.8
FAN16G3281 Fragaria x ananassa HOM05D000138 ORTHO05D000078 4.5e-10 69.3 156 37.2
CiPaw.13G104700 Carya illinoinensis HOM05D000138 ORTHO05D000078 1.0e-09 68.2 152 37.5
VMungo1080G1840 Vigna mungo HOM05D000138 ORTHO05D000078 1.0e-09 68.2 156 37.2
QL08p057127 Quercus lobata HOM05D000138 ORTHO05D000078 1.3e-09 67.8 159 33.3
SalBow3G3067 Salvia bowleyana HOM05D000138 ORTHO05D000078 1.7e-09 67.4 359 26.5
TPR.G11557 Trifolium pratense HOM05D000138 ORTHO05D000078 1.7e-09 67.4 152 36.8
Glyma.11G149825 Glycine max HOM05D000138 ORTHO05D000078 2.2e-09 67.0 151 38.4
SGA_v2.0_scaffold146G36243 Striga asiatica HOM05D000138 ORTHO05D000078 2.2e-09 67.0 174 35.1
TAR369G0541 Trochodendron aralioides HOM05D000138 ORTHO05D000078 2.2e-09 67.0 154 36.4
CANSAT54G2745 Cannabis sativa HOM05D000138 ORTHO05D000078 2.9e-09 66.6 169 36.1
CsaV3_6G021830 Cucumis sativus L. HOM05D000138 ORTHO05D000078 2.9e-09 66.6 156 41.0
Medtr4g061200 Medicago truncatula HOM05D000138 ORTHO05D000078 2.9e-09 66.6 151 37.7
Thecc.09G336100 Theobroma cacao HOM05D000138 ORTHO05D000078 2.9e-09 66.6 160 36.9
ClCG02G020780 Citrullus lanatus HOM05D000138 ORTHO05D000078 3.8e-09 66.2 155 41.3
MELO3C025726.2 Cucumis melo HOM05D000138 ORTHO05D000078 3.8e-09 66.2 156 41.0
Medtr2g093060 Medicago truncatula HOM05D000138 ORTHO05D000078 3.8e-09 66.2 153 36.6
Dinv11817 Davidia involucrata HOM05D000138 ORTHO05D000078 1.1e-08 64.7 194 31.4
Lj1A181T23 Lonicera japonica HOM05D000138 ORTHO05D000078 1.1e-08 64.7 151 38.4
Lj3g0016040 Lotus japonicus HOM05D000138 ORTHO05D000078 1.5e-08 64.3 152 35.5
vmacro14485 Vaccinium macrocarpon HOM05D000138 ORTHO05D000078 1.5e-08 64.3 172 32.6
TAR623G1691 Trochodendron aralioides HOM05D000138 ORTHO05D000078 1.9e-08 63.9 155 34.8
Ca_01447_v3 Cicer arietinum L. HOM05D000138 ORTHO05D000078 2.5e-08 63.5 152 36.2
Duzib150G0277 Durio zibethinus HOM05D000138 ORTHO05D000078 2.5e-08 63.5 155 36.1
Nn2g10630 Nelumbo nucifera HOM05D000138 ORTHO05D000078 3.2e-08 63.2 155 34.8
Cpa.g.sc139.43 Carica papaya HOM05D000138 ORTHO05D000078 5.5e-08 62.4 94 44.7
Sed0000924 Sechium edule HOM05D000138 ORTHO05D000078 7.2e-08 62.0 186 35.5
Glyma.13G329700 Glycine max HOM05D000138 ORTHO05D000078 9.4e-08 61.6 165 35.2
Aqoxy4G03170 Aquilegia oxysepala HOM05D000138 ORTHO05D000078 1.2e-07 61.2 159 34.6
TWI31G0284 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 1.2e-07 61.2 148 39.2
MSTRG.12619 Avicennia marina HOM05D000138 ORTHO05D000078 1.6e-07 60.8 90 46.7
Actinidia03756 Actinidia chinensis HOM05D000138 ORTHO05D000078 2.1e-07 60.5 145 34.5
Hma1.2p1_0407F.1_g146190 Hydrangea macrophylla HOM05D000138 ORTHO05D000078 2.1e-07 60.5 66 53.0
MD04G1105200 Malus domestica HOM05D000138 ORTHO05D000078 2.1e-07 60.5 168 32.1
TWI79G0541 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 2.1e-07 60.5 150 39.3
Duzib170G0154 Durio zibethinus HOM05D000138 ORTHO05D000078 6.1e-07 58.9 154 33.8
Thecc.10G066100 Theobroma cacao HOM05D000138 ORTHO05D000078 6.1e-07 58.9 163 31.9
Actinidia03019 Actinidia chinensis HOM05D000138 ORTHO05D000078 1.4e-06 57.8 156 31.4
Actinidia38241 Actinidia chinensis HOM05D000138 ORTHO05D000078 1.4e-06 57.8 155 31.0
Cpa.g.sc114.55 Carica papaya HOM05D000138 ORTHO05D000078 1.8e-06 57.4 167 34.7
MBI05_g38505_MAGBIO Magnolia biondii HOM05D000138 ORTHO05D000078 1.8e-06 57.4 143 34.3
AL4G23050 Arabidopsis lyrata HOM05D000138 ORTHO05D000078 2.3e-06 57.0 183 34.4
arahy.Tifrunner.gnm1.ann1.QEK7F9 Arachis hypogaea HOM05D000138 ORTHO05D000078 2.3e-06 57.0 151 33.8
Lj3g0017388 Lotus japonicus HOM05D000138 ORTHO05D000078 3.0e-06 56.6 147 33.3
Thecc.05G052900 Theobroma cacao HOM05D000138 ORTHO05D000078 3.0e-06 56.6 162 34.0
Potri.010G216200 Populus trichocarpa HOM05D000138 ORTHO05D000078 4.0e-06 56.2 163 31.3
arahy.Tifrunner.gnm1.ann1.K6QUG2 Arachis hypogaea HOM05D000138 ORTHO05D000078 5.2e-06 55.8 151 33.1
Prupe.6G242400 Prunus persica HOM05D000138 ORTHO05D000078 6.8e-06 55.5 166 30.7
Ciclev10031306m.g Citrus clementina HOM05D000138 ORTHO05D000078 8.8e-06 55.1 152 32.2


User provided reference genes

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