Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057577.1 Olea europaea HOM05D000161 ORTHO05D009031 0.0e+00 1549.6 756 100.0
Oeu034814.1 Olea europaea HOM05D000161 ORTHO05D009031 0.0e+00 1312.7 775 83.7
Actinidia00683 Actinidia chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1290.8 756 81.5
Dinv33015 Davidia involucrata HOM05D000161 ORTHO05D009031 0.0e+00 1285.4 755 82.0
Cc01_g20450 Coffea canephora HOM05D000161 ORTHO05D009031 0.0e+00 1273.8 759 79.6
MSTRG.18182 Avicennia marina HOM05D000161 ORTHO05D009031 0.0e+00 1270.4 752 81.2
SGA_v2.0_scaffold1G00398 Striga asiatica HOM05D000161 ORTHO05D009031 0.0e+00 1268.8 750 80.7
COL.COLO4_08004 Corchorus olitorius HOM05D000161 ORTHO05D009031 0.0e+00 1264.6 755 80.4
TWI59G0096 Tripterygium wilfordii HOM05D000161 ORTHO05D009031 0.0e+00 1261.5 753 80.1
vmacro02493 Vaccinium macrocarpon HOM05D000161 ORTHO05D009031 0.0e+00 1261.1 770 78.7
Gohir.A11G116600 Gossypium hirsutum HOM05D000161 ORTHO05D009031 0.0e+00 1259.2 754 79.7
Migut.D00162 Erythranthe guttata HOM05D000161 ORTHO05D009031 0.0e+00 1253.0 744 81.2
Gohir.D11G121700 Gossypium hirsutum HOM05D000161 ORTHO05D009031 0.0e+00 1253.0 754 79.0
Gorai.007G130400 Gossypium raimondii HOM05D000161 ORTHO05D009031 0.0e+00 1250.7 754 78.9
PGSC0003DMG400011361 Solanum tuberosum HOM05D000161 ORTHO05D009031 0.0e+00 1249.6 758 78.9
GSVIVG01010978001 Vitis vinifera HOM05D000161 ORTHO05D009031 0.0e+00 1249.6 745 80.1
Thecc.01G293400 Theobroma cacao HOM05D000161 ORTHO05D009031 0.0e+00 1248.0 755 79.9
CANSAT25G3411 Cannabis sativa HOM05D000161 ORTHO05D009031 0.0e+00 1246.1 738 79.8
CAN.G1777.2 Capsicum annuum HOM05D000161 ORTHO05D009031 0.0e+00 1245.7 756 79.1
Manes.05G066300 Manihot esculenta HOM05D000161 ORTHO05D009031 0.0e+00 1245.3 755 78.7
MD03G1280600 Malus domestica HOM05D000161 ORTHO05D009031 0.0e+00 1245.0 754 78.4
Prupe.8G255100 Prunus persica HOM05D000161 ORTHO05D009031 0.0e+00 1245.0 755 78.8
Ciclev10018836m.g Citrus clementina HOM05D000161 ORTHO05D009031 0.0e+00 1243.8 753 79.8
Duzib138G1706 Durio zibethinus HOM05D000161 ORTHO05D009031 0.0e+00 1243.8 766 78.3
Lj2C1188T5 Lonicera japonica HOM05D000161 ORTHO05D009031 0.0e+00 1243.0 769 77.4
Atru.chr5.1245 Acer truncatum HOM05D000161 ORTHO05D009031 0.0e+00 1240.7 747 80.3
Cfa005996 Carpinus fangiana HOM05D000161 ORTHO05D009031 0.0e+00 1239.9 755 78.1
Solyc09g074660.3 Solanum lycopersicum HOM05D000161 ORTHO05D009031 0.0e+00 1238.4 747 79.3
Potri.002G209900 Populus trichocarpa HOM05D000161 ORTHO05D009031 0.0e+00 1233.8 755 78.5
CiPaw.07G102700 Carya illinoinensis HOM05D000161 ORTHO05D009031 0.0e+00 1231.5 755 78.0
Sopen09g029540 Solanum pennellii HOM05D000161 ORTHO05D009031 0.0e+00 1231.1 741 78.9
Phvul.001G204000 Phaseolus vulgaris HOM05D000161 ORTHO05D009031 0.0e+00 1224.2 750 77.6
TAR362G0905 Trochodendron aralioides HOM05D000161 ORTHO05D009031 0.0e+00 1223.0 755 78.0
Medtr7g108310 Medicago truncatula HOM05D000161 ORTHO05D009031 0.0e+00 1221.8 748 77.8
Sc24g0003880 Simmondsia chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1218.0 758 77.0
Nitab4.5_0001102g0080 Nicotiana tabacum HOM05D000161 ORTHO05D009031 0.0e+00 1216.8 757 77.9
SalBow3G3810 Salvia bowleyana HOM05D000161 ORTHO05D009031 0.0e+00 1216.8 750 78.1
Glyma.03G210900 Glycine max HOM05D000161 ORTHO05D009031 0.0e+00 1215.7 748 77.7
VMungo1383G3032 Vigna mungo HOM05D000161 ORTHO05D009031 0.0e+00 1215.7 747 77.2
Ca_09126_v3 Cicer arietinum L. HOM05D000161 ORTHO05D009031 0.0e+00 1213.0 746 78.0
TPR.G9287 Trifolium pratense HOM05D000161 ORTHO05D009031 0.0e+00 1212.6 745 77.7
CsaV3_7G028900 Cucumis sativus L. HOM05D000161 ORTHO05D009031 0.0e+00 1210.3 750 76.4
Glyma.19G208100 Glycine max HOM05D000161 ORTHO05D009031 0.0e+00 1210.3 747 77.0
Nitab4.5_0005245g0010 Nicotiana tabacum HOM05D000161 ORTHO05D009031 0.0e+00 1209.9 756 77.6
Sabra02G0150400 Salix brachista HOM05D000161 ORTHO05D009031 0.0e+00 1209.1 756 77.0
Lj1g0007269 Lotus japonicus HOM05D000161 ORTHO05D009031 0.0e+00 1208.7 746 77.7
Eucgr.K03449 Eucalyptus grandis HOM05D000161 ORTHO05D009031 0.0e+00 1208.0 757 75.7
ClCG09G006240 Citrullus lanatus HOM05D000161 ORTHO05D009031 0.0e+00 1207.6 750 77.2
EL10Ac7g17434 Beta vulgaris HOM05D000161 ORTHO05D009031 0.0e+00 1207.2 766 75.5
FvH4_2g25030 Fragaria vesca HOM05D000161 ORTHO05D009031 0.0e+00 1207.2 753 77.6
RcHm_v2.0_Chr6g0293001 Rosa chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1206.4 753 77.2
PGR044G2096 Punica granatum HOM05D000161 ORTHO05D009031 0.0e+00 1206.0 752 76.3
HanXRQChr11g0350111 Helianthus annuus HOM05D000161 ORTHO05D009031 0.0e+00 1203.0 751 76.0
Haze_04852 Corylus avellana HOM05D000161 ORTHO05D009031 0.0e+00 1202.6 765 76.3
ECA236G0218 Erigeron canadensis HOM05D000161 ORTHO05D009031 0.0e+00 1202.2 746 76.4
Nn3g21368 Nelumbo nucifera HOM05D000161 ORTHO05D009031 0.0e+00 1201.4 753 75.6
Aqoxy2G03055 Aquilegia oxysepala HOM05D000161 ORTHO05D009031 0.0e+00 1199.9 755 76.0
Sed0007225 Sechium edule HOM05D000161 ORTHO05D009031 0.0e+00 1199.5 750 76.0
Psat3g023920 Pisum sativum HOM05D000161 ORTHO05D009031 0.0e+00 1189.5 748 75.9
PSO170G2241 Papaver somniferum HOM05D000161 ORTHO05D009031 0.0e+00 1188.3 747 75.9
Rhsim13G0015500 Rhododendron simsii HOM05D000161 ORTHO05D009031 0.0e+00 1187.9 786 73.4
Lalb_Chr18g0047291 Lupinus albus HOM05D000161 ORTHO05D009031 0.0e+00 1185.2 747 76.4
FAN24G1124 Fragaria x ananassa HOM05D000161 ORTHO05D009031 0.0e+00 1182.9 753 76.5
PSO210G6500 Papaver somniferum HOM05D000161 ORTHO05D009031 0.0e+00 1180.6 777 73.4
FAN27G3195 Fragaria x ananassa HOM05D000161 ORTHO05D009031 0.0e+00 1174.5 765 75.3
Carub.0006s3386 Capsella rubella HOM05D000161 ORTHO05D009031 0.0e+00 1173.7 756 74.3
BraA09t35896Z Brassica rapa HOM05D000161 ORTHO05D009031 0.0e+00 1169.8 751 74.3
BcaB01g01973 Brassica carinata HOM05D000161 ORTHO05D009031 0.0e+00 1168.3 749 74.4
A09p02490 Brassica napus HOM05D000161 ORTHO05D009031 0.0e+00 1164.4 752 74.2
C09p02590 Brassica napus HOM05D000161 ORTHO05D009031 0.0e+00 1164.1 751 74.2
BcaC04g23994 Brassica carinata HOM05D000161 ORTHO05D009031 0.0e+00 1163.7 752 74.3
Thhalv10028434m.g Eutrema salsugineum HOM05D000161 ORTHO05D009031 0.0e+00 1163.3 756 73.9
BolC9t53189H Brassica oleracea HOM05D000161 ORTHO05D009031 0.0e+00 1162.9 751 73.9
unitig_747.g21791 Utricularia gibba HOM05D000161 ORTHO05D009031 0.0e+00 1162.1 809 70.2
AL6G49740 Arabidopsis lyrata HOM05D000161 ORTHO05D009031 0.0e+00 1159.8 756 73.1
CARHR251630 Cardamine hirsuta HOM05D000161 ORTHO05D009031 0.0e+00 1159.8 756 73.5
Sp6g03230 Schrenkiella parvula HOM05D000161 ORTHO05D009031 0.0e+00 1159.4 756 72.9
Lsat_1_v5_gn_8_54360 Lactuca sativa HOM05D000161 ORTHO05D009031 0.0e+00 1142.9 768 72.4
QL12p024497 Quercus lobata HOM05D000161 ORTHO05D009031 0.0e+00 1123.6 687 79.6
Peaxi162Scf00067g01926 Petunia axillaris HOM05D000161 ORTHO05D009031 0.0e+00 1122.5 695 77.7
Ah.08g212400 Amaranthus hybridus HOM05D000161 ORTHO05D009031 0.0e+00 1108.6 800 68.6
arahy.Tifrunner.gnm1.ann1.4BF7AZ Arachis hypogaea HOM05D000161 ORTHO05D009031 0.0e+00 1104.7 699 76.1
Aa31LG5G2700 Aethionema arabicum HOM05D000161 ORTHO05D009031 0.0e+00 1102.4 749 71.7
ATR0706G016 Amborella trichopoda HOM05D000161 ORTHO05D009031 0.0e+00 1101.7 755 70.3
MELO3C016048.2 Cucumis melo HOM05D000161 ORTHO05D009031 0.0e+00 1097.0 685 77.1
Lj1A36T49 Lonicera japonica HOM05D000161 ORTHO05D009031 0.0e+00 1078.5 758 70.6
MBI19_g24003_MAGBIO Magnolia biondii HOM05D000161 ORTHO05D009031 0.0e+00 1077.0 745 71.5
AUR62034669 Chenopodium quinoa HOM05D000161 ORTHO05D009031 8.7e-310 1066.6 845 65.0
Cpa.g.sc441.2 Carica papaya HOM05D000161 ORTHO05D009031 1.1e-307 1059.7 664 77.3
DCAR_018348 Daucus carota HOM05D000161 ORTHO05D009031 1.8e-307 1058.9 738 70.6
AT4G03200 Arabidopsis thaliana HOM05D000161 ORTHO05D009031 3.0e-302 1041.6 686 72.9
CSS0042056 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D009031 4.3e-301 1037.7 625 80.2
Pp3c3_16890 Physcomitrium patens HOM05D000161 ORTHO05D009031 2.0e-282 975.7 756 61.9
Mapoly0086s0039 Marchantia polymorpha HOM05D000161 ORTHO05D009031 5.5e-280 967.6 737 61.3
AagrBONN_evm.TU.Sc2ySwM_362.238 Anthoceros agrestis HOM05D000161 ORTHO05D009031 5.0e-273 944.5 752 59.7
arahy.Tifrunner.gnm1.ann1.Z5FZN7 Arachis hypogaea HOM05D000161 ORTHO05D009031 9.4e-264 913.7 605 73.2
AUR62008570 Chenopodium quinoa HOM05D000161 ORTHO05D009031 8.9e-254 880.6 688 65.6
Zm00001eb141990 Zea mays HOM05D000161 ORTHO05D009031 1.3e-252 876.7 635 66.9
HPP92_011821 Vanilla planifolia HOM05D000161 ORTHO05D009031 3.3e-240 835.5 623 64.7
CBR_g39419 Chara braunii HOM05D000019 ORTHO05D000048 4.6e-226 788.5 677 55.1
CDE09G1084 Ceratophyllum demersum HOM05D000161 ORTHO05D009031 1.3e-207 727.2 523 68.6
Cre07.g331250 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D009031 9.4e-171 604.7 796 42.7
Lj1A204T33 Lonicera japonica HOM05D000161 ORTHO05D009031 1.6e-149 534.3 597 50.8
SMO011G0044 Selaginella moellendorffii HOM05D000161 ORTHO05D009031 2.7e-149 533.5 354 68.1
SEGI_38220 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 1.4e-126 458.0 292 73.3
Os01g0935600 Oryza sativa ssp. japonica HOM05D000161 ORTHO05D009031 1.7e-92 344.7 262 65.3
arahy.Tifrunner.gnm1.ann1.S4ZP24 Arachis hypogaea HOM05D000161 ORTHO05D009031 3.2e-86 323.9 289 61.9
arahy.Tifrunner.gnm1.ann1.FVA5UA Arachis hypogaea HOM05D000161 ORTHO05D009031 7.6e-80 302.8 226 68.1
arahy.Tifrunner.gnm1.ann1.59Y12W Arachis hypogaea HOM05D000161 ORTHO05D007114 3.3e-75 287.3 259 60.2
EL10Ac6g14352 Beta vulgaris HOM05D000161 ORTHO05D009031 1.3e-58 232.3 148 73.0
EL10Ac7g17602 Beta vulgaris HOM05D000161 ORTHO05D039009 4.2e-46 190.7 122 73.0
SEGI_26615 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 2.0e-43 181.8 125 68.8
arahy.Tifrunner.gnm1.ann1.NYYR6I Arachis hypogaea HOM05D000161 ORTHO05D038839 4.1e-41 174.1 138 59.4
HPP92_011833 Vanilla planifolia HOM05D000161 ORTHO05D036718 5.2e-36 157.1 87 77.0
Lsat_1_v5_gn_2_56220 Lactuca sativa HOM05D000161 ORTHO05D229717 2.0e-27 128.6 92 67.4
arahy.Tifrunner.gnm1.ann1.A1CTBX Arachis hypogaea HOM05D000161 ORTHO05D083724 1.4e-25 122.5 157 45.9
SEGI_06948 Sequoiadendron giganteum HOM05D000161 ORTHO05D038839 8.6e-23 113.2 107 48.6
Lj1A206G50 Lonicera japonica HOM05D000161 ORTHO05D235408 2.1e-21 108.6 105 56.2
EL10Ac9g20878 Beta vulgaris HOM05D008595 ORTHO05D010945 3.2e-17 94.7 62 71.0
SEGI_02592 Sequoiadendron giganteum HOM05D000161 ORTHO05D039009 1.3e-15 89.4 56 76.8
arahy.Tifrunner.gnm1.ann1.0H5KQ4 Arachis hypogaea HOM05D000161 ORTHO05D009031 1.4e-12 79.3 43 81.4
Medtr3g438040 Medicago truncatula HOM05D000161 ORTHO05D036718 1.7e-10 72.4 45 68.9
A03p30570 Brassica napus HOM05D000161 ORTHO05D041164 2.3e-07 62.0 41 70.7
BraA03t12237Z Brassica rapa HOM05D000161 ORTHO05D041164 2.5e-06 58.5 74 47.3


User provided reference genes

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