Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 0.0e+00 1568.1 851 100.0
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 9.6e-281 970.3 857 62.9
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 3.1e-279 965.3 900 60.9
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 5.2e-279 964.5 853 62.4
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 3.8e-277 958.4 853 63.1
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 1.3e-274 949.9 869 62.5
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 3.6e-272 941.8 797 64.1
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 4.0e-271 938.3 846 62.1
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.2e-267 926.8 839 60.3
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 3.9e-266 921.8 815 62.2
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 5.8e-262 907.9 821 61.5
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 4.2e-260 901.7 821 61.3
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 6.2e-256 887.9 816 61.0
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 1.3e-253 880.2 885 57.3
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 1.1e-252 877.1 886 57.3
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 3.9e-250 868.6 857 57.5
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 1.4e-247 860.1 892 54.7
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 7.7e-246 854.4 823 57.5
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 3.8e-245 852.0 900 53.8
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 3.8e-245 852.0 907 54.0
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.4e-244 850.1 901 55.3
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 1.8e-242 843.2 932 52.8
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 6.7e-242 841.3 907 54.8
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 3.3e-241 839.0 886 55.9
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 4.3e-241 838.6 815 57.7
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 1.5e-238 830.1 899 54.5
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 4.5e-238 828.6 832 56.7
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 1.7e-237 826.6 913 52.2
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 5.0e-237 825.1 826 57.1
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 2.5e-236 822.8 905 53.5
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 7.2e-236 821.2 869 54.4
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 3.6e-235 818.9 835 55.3
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 6.1e-235 818.1 892 51.7
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.3e-234 816.2 819 57.3
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 3.9e-234 815.5 831 56.9
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 8.8e-234 814.3 890 52.2
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 3.3e-233 812.4 832 56.7
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 4.4e-233 812.0 905 53.1
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 1.7e-232 810.1 896 53.3
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 1.4e-231 807.0 798 56.8
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 1.7e-229 800.0 917 51.4
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 1.1e-228 797.3 885 53.4
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 3.6e-227 792.3 879 53.5
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 1.4e-226 790.4 846 53.3
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 2.3e-226 789.6 804 55.3
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 6.7e-226 788.1 803 53.3
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 2.6e-225 786.2 738 57.3
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 3.3e-225 785.8 880 51.7
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 5.7e-225 785.0 869 50.5
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 9.7e-225 784.3 805 53.2
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 1.1e-223 780.8 803 53.9
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 1.2e-222 777.3 834 52.9
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 2.0e-222 776.5 818 52.0
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 2.6e-222 776.2 848 53.3
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 4.5e-222 775.4 893 50.6
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 2.2e-221 773.1 810 53.2
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 6.5e-221 771.5 800 54.0
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 6.5e-221 771.5 737 56.3
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 3.2e-220 769.2 864 51.3
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 7.2e-220 768.1 826 53.1
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 1.2e-219 767.3 819 53.5
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 1.6e-219 766.9 833 52.9
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 4.7e-219 765.4 891 50.4
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 2.3e-218 763.1 862 49.9
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 4.0e-218 762.3 895 51.3
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 6.7e-218 761.5 889 50.1
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 8.8e-218 761.1 826 52.7
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 1.5e-217 760.4 833 52.3
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 1.7e-216 756.9 764 55.2
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 3.7e-216 755.7 766 55.5
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 3.7e-216 755.7 828 53.0
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 3.7e-216 755.7 855 52.4
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 1.6e-214 750.4 827 52.0
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 3.5e-214 749.2 819 51.8
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 4.5e-214 748.8 822 51.1
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 7.7e-214 748.0 807 52.4
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 1.0e-213 747.7 830 51.1
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 1.0e-213 747.7 807 52.4
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 4.2e-212 742.3 734 54.9
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 6.3e-208 728.4 797 51.7
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 1.1e-207 727.6 909 48.3
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 2.0e-206 723.4 835 52.8
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 2.0e-201 706.8 630 61.7
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 1.2e-198 697.6 819 49.9
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 5.0e-197 692.2 830 49.0
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 6.6e-197 691.8 918 46.2
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 1.1e-196 691.0 769 51.9
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 2.3e-178 630.2 745 49.0
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 4.0e-178 629.4 814 46.3
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 2.1e-174 617.1 703 49.6
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 2.3e-173 613.6 697 50.9
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 8.1e-171 605.1 678 53.5
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 4.9e-160 569.3 542 59.0
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 1.4e-159 567.8 409 68.2
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 6.0e-158 562.4 411 67.2
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 2.5e-156 557.0 891 41.8
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 9.9e-153 545.0 855 44.2
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 4.8e-147 526.2 482 56.4
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 6.2e-147 525.8 588 50.2
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 3.3e-124 450.3 419 58.0
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 7.7e-121 439.1 490 53.5
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 3.2e-103 380.6 665 36.2
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 4.0e-85 320.5 222 70.7
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 2.2e-83 314.7 777 31.0
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 3.7e-83 313.9 524 40.5
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 2.7e-81 307.8 341 55.1
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 1.9e-79 301.6 948 28.9
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 1.6e-78 298.5 651 32.1
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 1.9e-74 285.0 1001 27.0
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 1.1e-63 249.2 225 63.1
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 9.6e-55 219.5 288 45.1
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 1.2e-52 212.6 147 70.1
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 3.2e-34 151.4 217 41.9
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 4.3e-31 141.0 158 53.8
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 4.8e-30 137.5 246 41.9
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 2.4e-21 108.6 63 77.8
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 1.0e-19 103.2 134 48.5
Cfa000625 Carpinus fangiana HOM05D001879 ORTHO05D007957 3.2e-18 98.2 145 48.3
MCO02G333 Micromonas commoda HOM05D001879 ORTHO05D007957 6.7e-16 90.5 729 24.4
Cfa010565 Carpinus fangiana HOM05D001879 ORTHO05D007957 9.7e-15 86.7 117 47.9
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 1.8e-13 82.4 54 70.4
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 8.5e-11 73.6 246 25.2
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 3.2e-10 71.6 45 73.3
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 3.2e-10 71.6 45 73.3
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 1.4e-08 66.2 122 39.3


User provided reference genes

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