Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055886.1 Olea europaea HOM05D003776 ORTHO05D004459 1.0e-188 663.3 340 100.0
MSTRG.19598 Avicennia marina HOM05D003776 ORTHO05D004459 5.4e-110 401.7 317 67.5
Migut.J01158 Erythranthe guttata HOM05D003776 ORTHO05D004459 2.1e-101 373.2 317 65.3
CAN.G816.2 Capsicum annuum HOM05D003776 ORTHO05D004459 2.7e-101 372.9 291 68.0
Nitab4.5_0002658g0150 Nicotiana tabacum HOM05D003776 ORTHO05D004459 7.9e-101 371.3 293 68.3
QL02p088328 Quercus lobata HOM05D003776 ORTHO05D004459 8.7e-100 367.9 318 62.9
Peaxi162Scf01211g00016 Petunia axillaris HOM05D003776 ORTHO05D004459 1.1e-99 367.5 308 65.6
Solyc12g006480.2 Solanum lycopersicum HOM05D003776 ORTHO05D004459 6.2e-98 361.7 291 67.4
Sopen12g002420 Solanum pennellii HOM05D003776 ORTHO05D004459 6.9e-97 358.2 291 66.7
GSVIVG01015528001 Vitis vinifera HOM05D003776 ORTHO05D004459 1.2e-96 357.5 320 61.6
Cc06_g08530 Coffea canephora HOM05D003776 ORTHO05D004459 7.6e-96 354.8 292 65.1
RcHm_v2.0_Chr2g0088511 Rosa chinensis HOM05D003776 ORTHO05D004459 7.6e-96 354.8 298 64.8
FAN19G1245 Fragaria x ananassa HOM05D003776 ORTHO05D004459 2.9e-95 352.8 298 63.8
Ciclev10007244m.g Citrus clementina HOM05D003776 ORTHO05D004459 1.4e-94 350.5 318 60.7
MD02G1032900 Malus domestica HOM05D003776 ORTHO05D004459 1.4e-94 350.5 320 60.0
FAN26G1438 Fragaria x ananassa HOM05D003776 ORTHO05D004459 2.4e-94 349.7 298 63.1
FvH4_1g03320 Fragaria vesca HOM05D003776 ORTHO05D004459 3.2e-94 349.4 298 63.4
FAN28G2120 Fragaria x ananassa HOM05D003776 ORTHO05D004459 4.2e-94 349.0 298 62.8
FAN23G1640 Fragaria x ananassa HOM05D003776 ORTHO05D004459 5.4e-94 348.6 298 63.4
Manes.05G119700 Manihot esculenta HOM05D003776 ORTHO05D004459 5.4e-94 348.6 315 59.4
Cfa003371 Carpinus fangiana HOM05D003776 ORTHO05D004459 9.3e-94 347.8 318 60.4
Nn8g39448 Nelumbo nucifera HOM05D003776 ORTHO05D004459 9.3e-94 347.8 335 58.5
Haze_25580 Corylus avellana HOM05D003776 ORTHO05D004459 1.2e-93 347.4 318 60.4
Rhsim03G0247900 Rhododendron simsii HOM05D003776 ORTHO05D004459 1.2e-93 347.4 297 62.6
Prupe.7G242500 Prunus persica HOM05D003776 ORTHO05D004459 6.0e-93 345.1 320 60.3
Hma1.2p1_2368F.1_g320720 Hydrangea macrophylla HOM05D003776 ORTHO05D004459 1.3e-92 344.0 319 60.5
TAR625G0211 Trochodendron aralioides HOM05D003776 ORTHO05D004459 1.8e-92 343.6 334 59.6
Lsat_1_v5_gn_5_96021 Lactuca sativa HOM05D003776 ORTHO05D004459 3.9e-92 342.4 314 59.2
Duzib168G2222 Durio zibethinus HOM05D003776 ORTHO05D004459 1.1e-91 340.9 338 58.0
DCAR_017818 Daucus carota HOM05D003776 ORTHO05D004459 1.9e-91 340.1 296 61.8
Thecc.09G126200 Theobroma cacao HOM05D003776 ORTHO05D004459 2.5e-91 339.7 318 59.4
CiPaw.03G244000 Carya illinoinensis HOM05D003776 ORTHO05D004459 5.6e-91 338.6 320 59.4
Lalb_Chr11g0072121 Lupinus albus HOM05D003776 ORTHO05D004459 5.6e-91 338.6 295 61.7
Potri.006G119600 Populus trichocarpa HOM05D003776 ORTHO05D004459 5.6e-91 338.6 320 60.9
ECA234G1804 Erigeron canadensis HOM05D003776 ORTHO05D004459 4.8e-90 335.5 318 57.2
Dinv36529 Davidia involucrata HOM05D003776 ORTHO05D004459 8.1e-90 334.7 332 59.0
Phvul.009G198200 Phaseolus vulgaris HOM05D003776 ORTHO05D004459 1.8e-89 333.6 293 62.8
Atru.chr7.1164 Acer truncatum HOM05D003776 ORTHO05D004459 4.0e-89 332.4 318 57.9
HanXRQChr10g0315491 Helianthus annuus HOM05D003776 ORTHO05D004459 9.0e-89 331.3 317 57.1
Ca_14403_v3 Cicer arietinum L. HOM05D003776 ORTHO05D004459 2.6e-88 329.7 335 57.3
VMungo1309G0107 Vigna mungo HOM05D003776 ORTHO05D004459 2.9e-87 326.2 295 61.4
CANSAT11G0130 Cannabis sativa HOM05D003776 ORTHO05D004459 4.9e-87 325.5 329 57.4
Glyma.06G222100 Glycine max HOM05D003776 ORTHO05D004459 4.9e-87 325.5 334 56.6
TPR.G21471 Trifolium pratense HOM05D003776 ORTHO05D004459 1.1e-86 324.3 334 56.3
Lalb_Chr08g0234811 Lupinus albus HOM05D003776 ORTHO05D004459 1.4e-86 323.9 302 59.3
Gohir.D07G039800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 1.6e-85 320.5 318 56.3
Gohir.A07G035800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 2.1e-85 320.1 318 55.7
Medtr7g099880 Medicago truncatula HOM05D003776 ORTHO05D004459 2.1e-85 320.1 334 56.0
Sabra06G0094200 Salix brachista HOM05D003776 ORTHO05D004459 2.7e-85 319.7 342 55.0
Psat1g024680 Pisum sativum HOM05D003776 ORTHO05D004459 3.5e-85 319.3 334 55.7
Gorai.001G042000 Gossypium raimondii HOM05D003776 ORTHO05D004459 4.6e-85 318.9 318 56.3
Eucgr.C04218 Eucalyptus grandis HOM05D003776 ORTHO05D004459 1.3e-84 317.4 337 55.5
EL10Ac8g18652 Beta vulgaris HOM05D003776 ORTHO05D004459 6.7e-84 315.1 298 59.4
Lj3g0001115 Lotus japonicus HOM05D003776 ORTHO05D004459 6.7e-84 315.1 297 59.9
Sc08g0006640 Simmondsia chinensis HOM05D003776 ORTHO05D004459 8.7e-84 314.7 335 55.2
TWI34G1787 Tripterygium wilfordii HOM05D003776 ORTHO05D004459 3.3e-83 312.8 319 56.1
vmacro06129 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 4.3e-83 312.4 272 62.5
PSO170G4267 Papaver somniferum HOM05D003776 ORTHO05D004459 7.4e-83 311.6 319 55.8
Ah.09g226220 Amaranthus hybridus HOM05D003776 ORTHO05D004459 1.6e-82 310.5 296 58.4
Hund09133 Selenicereus undatus HOM05D003776 ORTHO05D004459 2.8e-82 309.7 298 57.0
Nitab4.5_0008846g0010 Nicotiana tabacum HOM05D003776 ORTHO05D004459 1.1e-81 307.8 293 59.7
Aqoxy7G02178 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 2.4e-81 306.6 297 59.9
Aqoxy3G01756 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 9.0e-81 304.7 297 59.3
PSO455G0084 Papaver somniferum HOM05D003776 ORTHO05D004459 9.0e-81 304.7 324 54.0
Sed0006794 Sechium edule HOM05D003776 ORTHO05D004459 8.4e-79 298.1 319 53.0
THA.LOC104808989 Tarenaya hassleriana HOM05D003776 ORTHO05D004459 1.9e-78 297.0 314 53.8
PGR102G3028 Punica granatum HOM05D003776 ORTHO05D004459 2.1e-77 293.5 310 54.2
CsaV3_2G002830 Cucumis sativus L. HOM05D003776 ORTHO05D004459 1.0e-76 291.2 318 51.3
Ca_29538_v3 Cicer arietinum L. HOM05D003776 ORTHO05D004459 1.1e-73 281.2 263 60.1
AL8G25470 Arabidopsis lyrata HOM05D003776 ORTHO05D004459 5.3e-73 278.9 312 52.2
Sp4g09050 Schrenkiella parvula HOM05D003776 ORTHO05D004459 7.7e-72 275.0 312 51.0
CARHR118630 Cardamine hirsuta HOM05D003776 ORTHO05D004459 1.0e-71 274.6 312 51.9
AT5G51200 Arabidopsis thaliana HOM05D003776 ORTHO05D004459 1.3e-71 274.2 315 51.7
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 5.0e-71 272.3 312 49.0
Cpa.g.sc75.30 Carica papaya HOM05D003776 ORTHO05D004459 6.5e-71 271.9 296 55.1
A07p17720 Brassica napus HOM05D003776 ORTHO05D004459 2.5e-70 270.0 308 50.0
Carub.0008s1091 Capsella rubella HOM05D003776 ORTHO05D004459 3.2e-70 269.6 312 51.0
BraA07t29494Z Brassica rapa HOM05D003776 ORTHO05D004459 5.5e-70 268.9 308 50.0
C07p25670 Brassica napus HOM05D003776 ORTHO05D004459 7.2e-70 268.5 308 49.7
BolC7t43085H Brassica oleracea HOM05D003776 ORTHO05D004459 7.2e-70 268.5 308 49.7
MELO3C004510.2 Cucumis melo HOM05D003776 ORTHO05D004459 9.4e-70 268.1 352 45.2
HPP92_008667 Vanilla planifolia HOM05D003776 ORTHO05D004459 9.1e-65 251.5 294 49.0
AUR62013362 Chenopodium quinoa HOM05D003776 ORTHO05D004459 1.2e-64 251.1 297 50.2
arahy.Tifrunner.gnm1.ann1.6DBV70 Arachis hypogaea HOM05D003776 ORTHO05D004459 2.6e-64 250.0 340 47.4
Os02g0202250 Oryza sativa ssp. japonica HOM05D003776 ORTHO05D004459 5.9e-64 248.8 294 47.3
Thhalv10002339m.g Eutrema salsugineum HOM05D003776 ORTHO05D004459 1.1e-59 234.6 312 44.9
ClCG11G003010 Citrullus lanatus HOM05D003776 ORTHO05D004459 2.2e-55 220.3 318 43.1
AUR62011127 Chenopodium quinoa HOM05D003776 ORTHO05D004459 1.8e-49 200.7 185 60.5
Actinidia07427 Actinidia chinensis HOM05D003776 ORTHO05D004459 1.6e-48 197.6 168 64.3
CDE02G1576 Ceratophyllum demersum HOM05D003776 ORTHO05D004459 3.5e-48 196.4 293 42.7
Pp3c4_20350 Physcomitrium patens HOM05D003776 ORTHO05D004459 2.8e-42 176.8 307 35.5
SMO347G0235 Selaginella moellendorffii HOM05D003776 ORTHO05D004459 1.9e-38 164.1 303 36.0
AagrBONN_evm.TU.Sc2ySwM_228.87 Anthoceros agrestis HOM05D003776 ORTHO05D004459 5.5e-38 162.5 318 34.6
Mapoly0052s0095 Marchantia polymorpha HOM05D003776 ORTHO05D004459 1.1e-33 148.3 312 33.7
ATR0322G028 Amborella trichopoda HOM05D003776 ORTHO05D004459 4.3e-30 136.3 169 46.7
Lj7C629G11 Lonicera japonica HOM05D003776 ORTHO05D004459 4.3e-30 136.3 174 46.6
Actinidia26393 Actinidia chinensis HOM05D003776 ORTHO05D004459 2.8e-29 133.7 299 36.5
Zm00001eb235620 Zea mays HOM05D003776 ORTHO05D004459 3.0e-28 130.2 152 46.1
CBR_g37692 Chara braunii HOM05D003776 ORTHO05D004459 6.8e-28 129.0 332 30.4
ATR0322G071 Amborella trichopoda HOM05D003776 ORTHO05D004459 4.9e-18 96.3 64 70.3
Actinidia07426 Actinidia chinensis HOM05D003776 ORTHO05D004459 1.7e-10 71.2 80 51.2
Prupe.1G010000 Prunus persica HOM05D003776 ORTHO05D004459 3.7e-10 70.1 59 64.4
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 8.3e-10 68.9 82 51.2
SEGI_19045 Sequoiadendron giganteum HOM05D003776 ORTHO05D004459 3.2e-09 67.0 67 50.7
RcHm_v2.0_Chr5g0007211 Rosa chinensis HOM05D003776 ORTHO05D004459 4.3e-06 56.6 133 32.3


User provided reference genes

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