Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055858.1 Olea europaea HOM05D003919 ORTHO05D004906 0.0e+00 2357.0 1176 100.0
Migut.J01108 Erythranthe guttata HOM05D003919 ORTHO05D004906 0.0e+00 1637.9 1171 69.9
Dinv11717 Davidia involucrata HOM05D003919 ORTHO05D004906 0.0e+00 1618.2 1170 69.1
Cc11_g02410 Coffea canephora HOM05D003919 ORTHO05D004906 0.0e+00 1577.8 1168 66.4
CSS0046709 Camellia sinensis var. sinensis HOM05D003919 ORTHO05D004906 0.0e+00 1555.4 1170 66.2
Sopen02g003520 Solanum pennellii HOM05D003919 ORTHO05D004906 0.0e+00 1544.3 1168 65.2
Nitab4.5_0000405g0040 Nicotiana tabacum HOM05D003919 ORTHO05D004906 0.0e+00 1540.8 1169 65.4
vmacro10895 Vaccinium macrocarpon HOM05D003919 ORTHO05D004906 0.0e+00 1532.3 1177 64.1
DCAR_026901 Daucus carota HOM05D003919 ORTHO05D004906 0.0e+00 1530.4 1171 65.4
Rhsim09G0081500 Rhododendron simsii HOM05D003919 ORTHO05D004906 0.0e+00 1506.5 1169 64.1
Peaxi162Scf00363g00321 Petunia axillaris HOM05D003919 ORTHO05D004906 0.0e+00 1500.0 1110 66.5
Haze_11754 Corylus avellana HOM05D003919 ORTHO05D004906 0.0e+00 1489.2 1177 63.8
SGA_v2.0_scaffold17G08205 Striga asiatica HOM05D003919 ORTHO05D004906 0.0e+00 1486.1 1127 66.7
Cfa008737 Carpinus fangiana HOM05D003919 ORTHO05D004906 0.0e+00 1481.5 1177 63.3
Duzib132G0455 Durio zibethinus HOM05D003919 ORTHO05D004906 0.0e+00 1476.5 1173 62.5
Sabra05G0077100 Salix brachista HOM05D003919 ORTHO05D004906 0.0e+00 1473.8 1178 62.7
FAN17G2968 Fragaria x ananassa HOM05D003919 ORTHO05D004906 0.0e+00 1469.9 1178 63.0
Ciclev10030469m.g Citrus clementina HOM05D003919 ORTHO05D004906 0.0e+00 1468.8 1170 62.5
FAN12G0111 Fragaria x ananassa HOM05D003919 ORTHO05D004906 0.0e+00 1464.5 1178 62.9
Potri.005G093000 Populus trichocarpa HOM05D003919 ORTHO05D004906 0.0e+00 1463.4 1193 62.4
RcHm_v2.0_Chr4g0446631 Rosa chinensis HOM05D003919 ORTHO05D004906 0.0e+00 1463.4 1173 62.7
FvH4_4g36870 Fragaria vesca HOM05D003919 ORTHO05D004906 0.0e+00 1462.2 1178 62.7
COL.COLO4_13755 Corchorus olitorius HOM05D003919 ORTHO05D004906 0.0e+00 1457.6 1173 61.8
FAN07G2510 Fragaria x ananassa HOM05D003919 ORTHO05D004906 0.0e+00 1453.7 1173 62.4
Solyc02g014180.2 Solanum lycopersicum HOM05D003919 ORTHO05D004906 0.0e+00 1453.3 1096 65.1
Prupe.1G347000 Prunus persica HOM05D003919 ORTHO05D004906 0.0e+00 1452.2 1170 62.0
Thecc.02G160300 Theobroma cacao HOM05D003919 ORTHO05D004906 0.0e+00 1448.3 1173 62.1
Hund24370 Selenicereus undatus HOM05D003919 ORTHO05D004906 0.0e+00 1446.8 1173 61.1
TAR374G1487 Trochodendron aralioides HOM05D003919 ORTHO05D004906 0.0e+00 1446.8 1182 62.3
MD16G1001800 Malus domestica HOM05D003919 ORTHO05D004906 0.0e+00 1442.9 1174 62.2
Gohir.D12G137500 Gossypium hirsutum HOM05D003919 ORTHO05D004906 0.0e+00 1439.5 1171 61.3
Gorai.008G149000 Gossypium raimondii HOM05D003919 ORTHO05D004906 0.0e+00 1439.1 1175 61.3
QL03p046003 Quercus lobata HOM05D003919 ORTHO05D004906 0.0e+00 1418.3 1116 63.6
Actinidia04322 Actinidia chinensis HOM05D003919 ORTHO05D004906 0.0e+00 1416.0 1170 61.7
AUR62017695 Chenopodium quinoa HOM05D003919 ORTHO05D004906 0.0e+00 1412.9 1172 60.5
Manes.04G066100 Manihot esculenta HOM05D003919 ORTHO05D004906 0.0e+00 1411.0 1171 59.5
TWI53G0046 Tripterygium wilfordii HOM05D003919 ORTHO05D004906 0.0e+00 1404.8 1170 59.7
AUR62015231 Chenopodium quinoa HOM05D003919 ORTHO05D004906 0.0e+00 1402.1 1173 60.2
Sc06g0007940 Simmondsia chinensis HOM05D003919 ORTHO05D004906 0.0e+00 1400.2 1178 59.2
Nn4g24949 Nelumbo nucifera HOM05D003919 ORTHO05D004906 0.0e+00 1395.9 1177 58.4
EL10Ac9g22945 Beta vulgaris HOM05D003919 ORTHO05D004906 0.0e+00 1387.5 1171 58.9
Phvul.003G005926 Phaseolus vulgaris HOM05D003919 ORTHO05D004906 0.0e+00 1385.2 1181 58.9
Psat6g099280 Pisum sativum HOM05D003919 ORTHO05D004906 0.0e+00 1382.5 1175 58.9
HanXRQChr12g0366421 Helianthus annuus HOM05D003919 ORTHO05D004906 0.0e+00 1380.9 1169 58.9
ECA233G1217 Erigeron canadensis HOM05D003919 ORTHO05D004906 0.0e+00 1380.2 1167 57.6
Glyma.20G003400 Glycine max HOM05D003919 ORTHO05D004906 0.0e+00 1379.0 1178 58.9
PGR044G0490 Punica granatum HOM05D003919 ORTHO05D004906 0.0e+00 1374.8 1171 59.0
Glyma.09G282200 Glycine max HOM05D003919 ORTHO05D004906 0.0e+00 1374.0 1185 59.2
Medtr1g037310 Medicago truncatula HOM05D003919 ORTHO05D004906 0.0e+00 1373.6 1177 58.5
Lalb_Chr04g0258931 Lupinus albus HOM05D003919 ORTHO05D004906 0.0e+00 1369.8 1179 58.7
TPR.G8246 Trifolium pratense HOM05D003919 ORTHO05D004906 0.0e+00 1363.2 1183 58.0
Lsat_1_v5_gn_8_31660 Lactuca sativa HOM05D003919 ORTHO05D004906 0.0e+00 1362.4 1170 58.8
Eucgr.J00863 Eucalyptus grandis HOM05D003919 ORTHO05D004906 0.0e+00 1358.2 1174 57.7
Lj2g0026278 Lotus japonicus HOM05D003919 ORTHO05D004906 0.0e+00 1347.0 1181 57.8
Sed0027848 Sechium edule HOM05D003919 ORTHO05D004906 0.0e+00 1346.6 1178 58.2
ClCG09G004560 Citrullus lanatus HOM05D003919 ORTHO05D004906 0.0e+00 1343.2 1170 58.5
Nitab4.5_0023098g0010 Nicotiana tabacum HOM05D003919 ORTHO05D004906 0.0e+00 1338.9 1016 65.6
CsaV3_7G030590 Cucumis sativus L. HOM05D003919 ORTHO05D004906 0.0e+00 1334.3 1179 57.8
THA.LOC104819381 Tarenaya hassleriana HOM05D003919 ORTHO05D004906 0.0e+00 1332.4 1175 57.1
MELO3C023597.2 Cucumis melo HOM05D003919 ORTHO05D004906 0.0e+00 1327.4 1176 57.7
PSO782G3793 Papaver somniferum HOM05D003919 ORTHO05D004906 0.0e+00 1324.7 1179 56.6
Ca_30179_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 0.0e+00 1315.8 1090 59.9
Dinv01184 Davidia involucrata HOM05D003919 ORTHO05D004906 0.0e+00 1312.4 1021 65.8
Aqoxy3G04259 Aquilegia oxysepala HOM05D003919 ORTHO05D004906 0.0e+00 1305.8 1178 57.0
BolC7t44964H Brassica oleracea HOM05D003919 ORTHO05D004906 0.0e+00 1302.0 1168 55.9
CiPaw.05G168800 Carya illinoinensis HOM05D003919 ORTHO05D004906 0.0e+00 1294.3 1172 57.2
BraA03t13766Z Brassica rapa HOM05D003919 ORTHO05D004906 0.0e+00 1290.8 1168 55.3
A03p46400 Brassica napus HOM05D003919 ORTHO05D004906 0.0e+00 1290.0 1168 55.5
Sp2g24010 Schrenkiella parvula HOM05D003919 ORTHO05D004906 0.0e+00 1289.2 1192 54.2
Thhalv10003499m.g Eutrema salsugineum HOM05D003919 ORTHO05D004906 0.0e+00 1288.1 1175 55.7
GSVIVG01012044001 Vitis vinifera HOM05D003919 ORTHO05D004906 0.0e+00 1284.2 1170 56.2
Aa31LG11G2600 Aethionema arabicum HOM05D003919 ORTHO05D004906 0.0e+00 1283.9 1173 55.2
Lj6P719T30 Lonicera japonica HOM05D003919 ORTHO05D004906 0.0e+00 1283.9 922 68.9
CARHR190420 Cardamine hirsuta HOM05D003919 ORTHO05D004906 0.0e+00 1282.3 1171 54.6
Carub.0006s2090 Capsella rubella HOM05D003919 ORTHO05D004906 0.0e+00 1246.9 1171 53.5
AL6G34300 Arabidopsis lyrata HOM05D003919 ORTHO05D004906 0.0e+00 1242.3 1172 53.2
AT5G23110 Arabidopsis thaliana HOM05D003919 ORTHO05D004906 0.0e+00 1239.6 1178 53.2
Ah.01g012290 Amaranthus hybridus HOM05D003919 ORTHO05D004906 0.0e+00 1217.6 1026 59.2
Gohir.A12G133900 Gossypium hirsutum HOM05D003919 ORTHO05D004906 0.0e+00 1210.3 988 60.6
ATR0618G139 Amborella trichopoda HOM05D003919 ORTHO05D004906 0.0e+00 1176.4 1182 50.3
Os04g0675200 Oryza sativa ssp. japonica HOM05D003919 ORTHO05D004906 0.0e+00 1168.7 1170 50.8
Cpa.g.sc0.152 Carica papaya HOM05D003919 ORTHO05D004906 0.0e+00 1167.1 988 60.2
Zm00001eb066370 Zea mays HOM05D003919 ORTHO05D004906 0.0e+00 1136.7 1183 49.8
SEGI_31724 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 0.0e+00 1083.6 1144 48.0
AagrBONN_evm.TU.Sc2ySwM_344.4345 Anthoceros agrestis HOM05D003919 ORTHO05D004906 1.3e-267 927.2 1220 41.1
CDE08G1346 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 1.8e-253 880.2 1114 43.2
Gohir.A12G134051 Gossypium hirsutum HOM05D003919 ORTHO05D004906 1.8e-253 880.2 1172 44.5
HPP92_012877 Vanilla planifolia HOM05D003919 ORTHO05D004906 3.4e-252 875.9 946 48.7
Mapoly0175s0011 Marchantia polymorpha HOM05D003919 ORTHO05D004906 4.4e-252 875.5 1211 39.7
Pp3c9_15860 Physcomitrium patens HOM05D003919 ORTHO05D004906 1.5e-247 860.5 1211 39.6
C07p44420 Brassica napus HOM05D003919 ORTHO05D004906 5.8e-228 795.4 1167 40.2
SMO164G0254 Selaginella moellendorffii HOM05D003919 ORTHO05D004906 3.3e-170 603.6 1181 33.4
Atru.chr11.1166 Acer truncatum HOM05D003919 ORTHO05D004906 1.5e-114 418.7 337 59.9
GSVIVG01028587001 Vitis vinifera HOM05D003919 ORTHO05D004906 3.8e-94 350.9 323 58.2
ECA233G4021 Erigeron canadensis HOM05D003919 ORTHO05D004906 2.4e-88 331.6 330 54.2
ECA233G5805 Erigeron canadensis HOM05D003919 ORTHO05D004906 7.4e-82 310.1 288 54.9
HanXRQChr08g0218771 Helianthus annuus HOM05D003919 ORTHO05D004906 1.2e-79 302.8 250 59.6
ECA233G3594 Erigeron canadensis HOM05D003919 ORTHO05D004906 1.7e-78 298.9 257 58.0
ECA233G5658 Erigeron canadensis HOM05D003919 ORTHO05D004906 5.5e-77 293.9 248 58.1
ECA233G4978 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.2e-77 293.5 294 54.4
HanXRQChr08g0218781 Helianthus annuus HOM05D003919 ORTHO05D004906 3.6e-76 291.2 272 54.4
MCO02G364 Micromonas commoda HOM05D003919 ORTHO05D004906 4.4e-58 231.1 1270 23.9
Nitab4.5_0003853g0040 Nicotiana tabacum HOM05D003919 ORTHO05D043505 4.4e-50 204.5 150 62.7
Cpa.g.sc0.154 Carica papaya HOM05D003919 ORTHO05D043505 3.3e-45 188.3 154 59.1
ECA233G0722 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-21 109.0 91 52.7
Lj6A719G43 Lonicera japonica HOM05D003919 ORTHO05D004906 2.3e-14 85.9 60 66.7
Atru.chr11.1141 Acer truncatum HOM05D002456 ORTHO05D002994 1.1e-13 83.6 61 59.0
Solyc02g014190.4 Solanum lycopersicum HOM05D003919 ORTHO05D004906 6.9e-11 74.3 69 53.6
Lj6C719G10 Lonicera japonica HOM05D003919 ORTHO05D004906 5.8e-10 71.2 459 24.8
Peaxi162Scf00363g00329 Petunia axillaris HOM05D003919 ORTHO05D004906 9.9e-10 70.5 60 55.0
Os04g0675101 Oryza sativa ssp. japonica HOM05D003919 ORTHO05D004906 4.9e-09 68.2 398 22.4
Ah.01g012280 Amaranthus hybridus HOM05D003919 ORTHO05D004906 1.6e-07 63.2 61 52.5
Ca_25292_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 1.6e-07 63.2 393 25.2


User provided reference genes

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