Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055354.1 Olea europaea HOM05D003586 ORTHO05D004036 7.3e-201 703.7 370 100.0
Oeu060859.1 Olea europaea HOM05D003586 ORTHO05D004036 1.7e-165 586.3 399 78.7
Migut.O00372 Erythranthe guttata HOM05D003586 ORTHO05D004036 2.0e-129 466.5 399 63.2
CSS0040773 Camellia sinensis var. sinensis HOM05D003586 ORTHO05D004036 1.1e-127 460.7 397 60.7
Rhsim03G0161600 Rhododendron simsii HOM05D003586 ORTHO05D004036 5.3e-127 458.4 397 60.7
MSTRG.139 Avicennia marina HOM05D003586 ORTHO05D004036 1.3e-125 453.8 396 61.9
SalBow2G2772 Salvia bowleyana HOM05D003586 ORTHO05D004036 2.5e-124 449.5 400 59.5
Lsat_1_v5_gn_8_9561 Lactuca sativa HOM05D003586 ORTHO05D004036 5.5e-124 448.4 397 57.4
SGA_v2.0_scaffold56G19917 Striga asiatica HOM05D003586 ORTHO05D004036 6.1e-123 444.9 416 58.2
Dinv06595 Davidia involucrata HOM05D003586 ORTHO05D004036 3.9e-122 442.2 397 58.9
Hma1.2p1_1580F.1_g291890 Hydrangea macrophylla HOM05D003586 ORTHO05D004036 3.9e-122 442.2 414 55.6
GSVIVG01013976001 Vitis vinifera HOM05D003586 ORTHO05D004036 5.1e-122 441.8 398 57.3
Atru.chr1.904 Acer truncatum HOM05D003586 ORTHO05D004036 6.7e-122 441.4 397 57.9
CAN.G485.19 Capsicum annuum HOM05D003586 ORTHO05D004036 6.7e-122 441.4 396 58.8
Peaxi162Scf00271g00727 Petunia axillaris HOM05D003586 ORTHO05D004036 6.7e-122 441.4 396 59.6
Lj8C46T11 Lonicera japonica HOM05D003586 ORTHO05D004036 7.4e-121 438.0 397 57.4
vmacro06834 Vaccinium macrocarpon HOM05D003586 ORTHO05D004036 1.3e-120 437.2 412 57.8
Ciclev10004122m.g Citrus clementina HOM05D003586 ORTHO05D004036 2.2e-120 436.4 397 57.9
DCAR_027698 Daucus carota HOM05D003586 ORTHO05D004036 8.2e-120 434.5 398 56.8
MD07G1249300 Malus domestica HOM05D003586 ORTHO05D004036 4.1e-119 432.2 400 58.0
QL09p028029 Quercus lobata HOM05D003586 ORTHO05D004036 5.9e-118 428.3 401 56.6
TAR375G0563 Trochodendron aralioides HOM05D003586 ORTHO05D004036 7.7e-118 427.9 397 56.4
ClCG07G016950 Citrullus lanatus HOM05D003586 ORTHO05D004036 1.0e-117 427.6 399 55.6
Nitab4.5_0003173g0040 Nicotiana tabacum HOM05D003586 ORTHO05D004036 2.9e-117 426.0 382 58.4
Prupe.2G273000 Prunus persica HOM05D003586 ORTHO05D004036 3.8e-117 425.6 398 57.0
HanXRQChr05g0139491 Helianthus annuus HOM05D003586 ORTHO05D004036 5.0e-117 425.2 391 55.5
Solyc03g093480.3 Solanum lycopersicum HOM05D003586 ORTHO05D004036 8.5e-117 424.5 396 56.8
Thecc.03G149300 Theobroma cacao HOM05D003586 ORTHO05D004036 1.1e-116 424.1 399 54.6
Sopen03g024310 Solanum pennellii HOM05D003586 ORTHO05D004036 2.5e-116 422.9 396 56.6
TWI23G0434 Tripterygium wilfordii HOM05D003586 ORTHO05D004036 2.5e-116 422.9 398 55.8
Cfa013573 Carpinus fangiana HOM05D003586 ORTHO05D004036 1.2e-115 420.6 398 55.8
MELO3C017650.2 Cucumis melo HOM05D003586 ORTHO05D004036 1.6e-115 420.2 399 55.9
Potri.003G151500 Populus trichocarpa HOM05D003586 ORTHO05D004036 1.6e-115 420.2 397 54.9
CSS0004894 Camellia sinensis var. sinensis HOM05D003586 ORTHO05D004036 5.2e-114 415.2 397 56.4
CsaV3_4G004170 Cucumis sativus L. HOM05D003586 ORTHO05D004036 1.5e-113 413.7 399 55.1
Manes.14G038400 Manihot esculenta HOM05D003586 ORTHO05D004036 2.6e-113 412.9 397 54.7
Sed0010855 Sechium edule HOM05D003586 ORTHO05D004036 3.3e-113 412.5 400 55.5
Gorai.001G050900 Gossypium raimondii HOM05D003586 ORTHO05D004036 4.4e-113 412.1 399 52.4
Hund18595 Selenicereus undatus HOM05D003586 ORTHO05D004036 5.7e-113 411.8 401 54.1
CiPaw.07G185400 Carya illinoinensis HOM05D003586 ORTHO05D004036 9.7e-113 411.0 397 55.2
Duzib205G0263 Durio zibethinus HOM05D003586 ORTHO05D004036 1.3e-112 410.6 400 52.8
Gohir.D07G047701 Gossypium hirsutum HOM05D003586 ORTHO05D004036 3.7e-112 409.1 399 52.1
COL.COLO4_37344 Corchorus olitorius HOM05D003586 ORTHO05D004036 4.8e-112 408.7 399 53.6
PGR042G0622 Punica granatum HOM05D003586 ORTHO05D004036 4.8e-112 408.7 397 53.4
Gohir.A07G043301 Gossypium hirsutum HOM05D003586 ORTHO05D004036 4.1e-111 405.6 399 51.9
Sc20g0000680 Simmondsia chinensis HOM05D003586 ORTHO05D004036 9.1e-111 404.4 401 54.6
Nn1g00886 Nelumbo nucifera HOM05D003586 ORTHO05D004036 2.6e-110 402.9 397 52.1
Sabra03G0109700 Salix brachista HOM05D003586 ORTHO05D004036 5.9e-110 401.7 438 50.2
Cc02_g04680 Coffea canephora HOM05D003586 ORTHO05D004036 1.3e-109 400.6 399 56.4
arahy.Tifrunner.gnm1.ann1.1899LM Arachis hypogaea HOM05D003586 ORTHO05D004036 2.9e-109 399.4 397 51.6
arahy.Tifrunner.gnm1.ann1.DI5547 Arachis hypogaea HOM05D003586 ORTHO05D004036 6.5e-109 398.3 397 51.6
AT3G06530 Arabidopsis thaliana HOM05D003586 ORTHO05D004036 1.9e-108 396.7 396 52.3
Lalb_Chr04g0248471 Lupinus albus HOM05D003586 ORTHO05D004036 1.9e-108 396.7 399 53.1
Sp3g05470 Schrenkiella parvula HOM05D003586 ORTHO05D004036 3.2e-108 396.0 396 51.5
LjContig00272g0012466 Lotus japonicus HOM05D003586 ORTHO05D004036 4.2e-108 395.6 397 52.1
EL10Ac7g18161 Beta vulgaris HOM05D003586 ORTHO05D004036 5.5e-108 395.2 401 53.1
ECA233G0107 Erigeron canadensis HOM05D003586 ORTHO05D004036 5.5e-108 395.2 394 54.1
Thhalv10019871m.g Eutrema salsugineum HOM05D003586 ORTHO05D004036 7.2e-108 394.8 396 50.8
Carub.0003s0599 Capsella rubella HOM05D003586 ORTHO05D004036 9.4e-108 394.4 396 52.0
CARHR081080 Cardamine hirsuta HOM05D003586 ORTHO05D004036 9.4e-108 394.4 396 50.8
Psat2g013320 Pisum sativum HOM05D003586 ORTHO05D004036 9.4e-108 394.4 397 51.1
AL3G17560 Arabidopsis lyrata HOM05D003586 ORTHO05D004036 2.7e-107 392.9 396 51.5
THA.LOC104811536 Tarenaya hassleriana HOM05D003586 ORTHO05D004036 2.7e-107 392.9 395 51.6
FAN06G2502 Fragaria x ananassa HOM05D003586 ORTHO05D004036 6.1e-107 391.7 398 53.3
BraA05t22871Z Brassica rapa HOM05D003586 ORTHO05D004036 1.4e-106 390.6 394 50.8
FAN01G1639 Fragaria x ananassa HOM05D003586 ORTHO05D004036 1.4e-106 390.6 398 52.8
Phvul.008G266400 Phaseolus vulgaris HOM05D003586 ORTHO05D004036 1.4e-106 390.6 398 51.3
BolC5t34730H Brassica oleracea HOM05D003586 ORTHO05D004036 1.8e-106 390.2 394 51.0
FvH4_7g26990 Fragaria vesca HOM05D003586 ORTHO05D004036 2.3e-106 389.8 398 53.0
FAN03G1177 Fragaria x ananassa HOM05D003586 ORTHO05D004036 4.0e-106 389.0 398 52.5
Ca_26483_v3 Cicer arietinum L. HOM05D003586 ORTHO05D004036 5.2e-106 388.7 398 50.5
C05p60700 Brassica napus HOM05D003586 ORTHO05D004036 6.8e-106 388.3 394 50.8
AUR62025663 Chenopodium quinoa HOM05D003586 ORTHO05D004036 1.5e-105 387.1 401 51.9
FAN10G2285 Fragaria x ananassa HOM05D003586 ORTHO05D004036 9.8e-105 384.4 398 52.3
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 2.2e-104 383.3 397 51.1
AUR62001342 Chenopodium quinoa HOM05D003586 ORTHO05D004036 8.3e-104 381.3 401 51.1
Glyma.02G290200 Glycine max HOM05D003586 ORTHO05D004036 9.1e-103 377.9 396 49.7
Aa31LG5G17060 Aethionema arabicum HOM05D003586 ORTHO05D004036 1.2e-102 377.5 394 51.5
Glyma.14G024600 Glycine max HOM05D003586 ORTHO05D004036 5.0e-101 372.1 396 49.0
SHI14045 Sapria himalayana HOM05D003586 ORTHO05D004036 1.9e-100 370.2 361 53.7
CANSAT56G4028 Cannabis sativa HOM05D003586 ORTHO05D004036 8.0e-99 364.8 399 50.6
Haze_22192 Corylus avellana HOM05D003586 ORTHO05D004036 1.0e-98 364.4 437 48.5
RcHm_v2.0_Chr1g0373711 Rosa chinensis HOM05D003586 ORTHO05D004036 1.0e-98 364.4 359 55.2
Cpa.g.sc13.258 Carica papaya HOM05D003586 ORTHO05D004036 6.8e-98 361.7 399 49.4
Aqoxy7G00839 Aquilegia oxysepala HOM05D003586 ORTHO05D004036 2.8e-96 356.3 397 48.9
MBI05_g26487_MAGBIO Magnolia biondii HOM05D003586 ORTHO05D004036 6.3e-96 355.1 398 48.0
PSO675G9104 Papaver somniferum HOM05D003586 ORTHO05D004036 1.4e-95 354.0 397 46.6
PSO732G0142 Papaver somniferum HOM05D003586 ORTHO05D004036 1.4e-95 354.0 397 46.9
Nitab4.5_0005495g0030 Nicotiana tabacum HOM05D003586 ORTHO05D004036 2.3e-93 346.7 316 58.9
Medtr5g092370 Medicago truncatula HOM05D003586 ORTHO05D004036 1.1e-92 344.4 397 47.6
CDE04G1406 Ceratophyllum demersum HOM05D003586 ORTHO05D004036 1.9e-92 343.6 397 45.8
Zm00001eb123540 Zea mays HOM05D003586 ORTHO05D004036 2.5e-92 343.2 398 46.7
ATR0057G101 Amborella trichopoda HOM05D003586 ORTHO05D004036 1.5e-89 334.0 398 46.0
Ah.08g217720 Amaranthus hybridus HOM05D003586 ORTHO05D004036 1.5e-84 317.4 401 47.4
HPP92_014907 Vanilla planifolia HOM05D003586 ORTHO05D004036 3.1e-82 309.7 400 42.0
SEGI_04827 Sequoiadendron giganteum HOM05D003586 ORTHO05D004036 6.8e-74 282.0 397 39.3
FAN06G2869 Fragaria x ananassa HOM05D003586 ORTHO05D004036 7.3e-68 261.9 198 65.2
TPR.G35189 Trifolium pratense HOM05D003586 ORTHO05D004036 1.2e-67 261.2 389 40.4
unitig_62.g23920 Utricularia gibba HOM05D003586 ORTHO05D004036 9.9e-65 251.5 379 42.2
AagrBONN_evm.TU.Sc2ySwM_344.3595 Anthoceros agrestis HOM05D003586 ORTHO05D004036 2.1e-54 217.2 389 35.5
Mapoly0043s0008 Marchantia polymorpha HOM05D003586 ORTHO05D004036 8.7e-53 211.8 390 35.6
SMO358G0582 Selaginella moellendorffii HOM05D003586 ORTHO05D004036 4.8e-51 206.1 391 34.8
Pp3c3_10580 Physcomitrium patens HOM05D003586 ORTHO05D004036 1.4e-47 194.5 403 33.5
CBR_g19186 Chara braunii HOM05D003586 ORTHO05D004036 8.1e-43 178.7 341 33.7
Rhsim03G0111100 Rhododendron simsii HOM05D003586 ORTHO05D004036 7.6e-41 172.2 240 42.9
Psat0s4851g0040 Pisum sativum HOM05D003586 ORTHO05D004036 1.1e-36 158.3 221 41.2
Psat0s7016g0120 Pisum sativum HOM05D003586 ORTHO05D004036 1.1e-36 158.3 221 41.2
MCO07G739 Micromonas commoda HOM05D003586 ORTHO05D004036 2.9e-32 143.7 274 35.8
Cre12.g548000 Chlamydomonas reinhardtii HOM05D003586 ORTHO05D004036 3.3e-28 130.2 199 39.7
Nitab4.5_0005495g0020 Nicotiana tabacum HOM05D003586 ORTHO05D004036 8.5e-16 89.0 77 50.6
Cfa023294 Carpinus fangiana HOM05D003586 ORTHO05D004036 1.2e-14 85.1 294 23.5
Gorai.003G117300 Gossypium raimondii HOM05D003586 ORTHO05D004036 8.8e-13 79.0 98 36.7
arahy.Tifrunner.gnm1.ann1.KSY044 Arachis hypogaea HOM05D000218 ORTHO05D000125 9.7e-12 75.5 169 33.1
Gohir.D03G110801 Gossypium hirsutum HOM05D003586 ORTHO05D004036 1.3e-11 75.1 98 35.7
THA.LOC104803129 Tarenaya hassleriana HOM05D003586 ORTHO05D004036 9.1e-10 68.9 61 54.1
arahy.Tifrunner.gnm1.ann1.EJWE4G Arachis hypogaea HOM05D003586 ORTHO05D004036 3.2e-07 60.5 41 58.5
arahy.Tifrunner.gnm1.ann1.AGWW40 Arachis hypogaea HOM05D000072 ORTHO05D000026 4.2e-07 60.1 41 58.5
THA.LOC104803128 Tarenaya hassleriana HOM05D003586 ORTHO05D004036 9.4e-07 58.9 65 38.5
SMO358G0141 Selaginella moellendorffii HOM05D003586 ORTHO05D377094 6.1e-06 56.2 207 28.5


User provided reference genes

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