Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055122.1 Olea europaea HOM05D000604 ORTHO05D000990 5.8e-121 437.6 221 100.0
Oeu037964.1 Olea europaea HOM05D000604 ORTHO05D000990 4.1e-58 228.8 187 70.6
Oeu007025.1 Olea europaea HOM05D000604 ORTHO05D000990 3.8e-56 222.2 228 57.0
Oeu018212.2 Olea europaea HOM05D000604 ORTHO05D000990 3.7e-51 205.7 217 59.0
Dinv42501 Davidia involucrata HOM05D000604 ORTHO05D000990 9.1e-50 201.1 237 51.9
Actinidia09673 Actinidia chinensis HOM05D000604 ORTHO05D000990 1.2e-44 184.1 234 51.3
MSTRG.2393 Avicennia marina HOM05D000604 ORTHO05D000990 2.6e-44 183.0 233 48.1
Migut.L01415 Erythranthe guttata HOM05D000604 ORTHO05D000990 3.4e-44 182.6 228 50.4
CSS0024617 Camellia sinensis var. sinensis HOM05D000604 ORTHO05D000990 2.4e-42 176.4 242 47.5
MSTRG.7900 Avicennia marina HOM05D000604 ORTHO05D000990 7.0e-42 174.9 220 52.3
Dinv19606 Davidia involucrata HOM05D000604 ORTHO05D000990 9.2e-42 174.5 246 48.0
Actinidia37120 Actinidia chinensis HOM05D000604 ORTHO05D000990 2.7e-41 172.9 208 53.8
Actinidia35427 Actinidia chinensis HOM05D000604 ORTHO05D000990 1.9e-39 166.8 224 49.1
CSS0024194 Camellia sinensis var. sinensis HOM05D000604 ORTHO05D000990 2.5e-39 166.4 229 48.0
Hma1.2p1_0151F.1_g067550 Hydrangea macrophylla HOM05D000604 ORTHO05D000990 3.3e-39 166.0 240 47.5
Hma1.2p1_0637F.1_g193380 Hydrangea macrophylla HOM05D000604 ORTHO05D000990 1.2e-38 164.1 240 47.1
Sabra05G0079700 Salix brachista HOM05D000604 ORTHO05D000990 1.5e-36 157.1 235 45.1
SalBow2G0155 Salvia bowleyana HOM05D000604 ORTHO05D000990 3.4e-36 156.0 221 48.0
Manes.06G174000 Manihot esculenta HOM05D000604 ORTHO05D000990 7.0e-34 148.3 236 44.1
Potri.005G097400 Populus trichocarpa HOM05D000604 ORTHO05D000990 9.2e-34 147.9 240 42.9
TAR625G0165 Trochodendron aralioides HOM05D000604 ORTHO05D000990 2.0e-33 146.7 230 45.7
Ca_03656_v3 Cicer arietinum L. HOM05D000604 ORTHO05D000990 1.7e-32 143.7 228 44.7
Potri.007G067100 Populus trichocarpa HOM05D000604 ORTHO05D000990 2.3e-32 143.3 240 42.9
Manes.14G011800 Manihot esculenta HOM05D000604 ORTHO05D000990 6.6e-32 141.7 240 42.5
vmacro05554 Vaccinium macrocarpon HOM05D000604 ORTHO05D000990 3.3e-31 139.4 211 45.5
Rhsim06G0240100 Rhododendron simsii HOM05D000604 ORTHO05D000990 1.2e-30 137.5 209 45.9
Prupe.4G137800 Prunus persica HOM05D000604 ORTHO05D000990 1.6e-30 137.1 230 43.0
vmacro11718 Vaccinium macrocarpon HOM05D000604 ORTHO05D000990 2.8e-30 136.3 211 46.4
CAN.G959.17 Capsicum annuum HOM05D000604 ORTHO05D000990 1.0e-29 134.4 229 42.8
VMungo1080G1692 Vigna mungo HOM05D000604 ORTHO05D000990 1.4e-29 134.0 232 43.1
CANSAT56G2040 Cannabis sativa HOM05D000604 ORTHO05D000990 3.1e-29 132.9 232 40.9
Medtr2g068690 Medicago truncatula HOM05D000604 ORTHO05D000990 6.8e-29 131.7 237 44.7
Phvul.005G049900 Phaseolus vulgaris HOM05D000604 ORTHO05D000990 1.2e-28 131.0 229 42.4
vmacro09776 Vaccinium macrocarpon HOM05D000604 ORTHO05D000990 1.2e-28 131.0 217 44.7
Psat1g013160 Pisum sativum HOM05D000604 ORTHO05D000990 1.7e-27 127.1 234 40.6
Glyma.08G168800 Glycine max HOM05D000604 ORTHO05D000990 2.2e-27 126.7 233 41.6
DCAR_019166 Daucus carota HOM05D000604 ORTHO05D000990 2.9e-27 126.3 231 41.6
Glyma.15G258300 Glycine max HOM05D000604 ORTHO05D000990 6.4e-27 125.2 228 40.8
Lalb_Chr20g0108631 Lupinus albus HOM05D000604 ORTHO05D000990 8.3e-27 124.8 234 41.0
Ciclev10018136m.g Citrus clementina HOM05D000604 ORTHO05D000990 1.1e-26 124.4 232 41.4
DCAR_015197 Daucus carota HOM05D000604 ORTHO05D000990 2.4e-26 123.2 216 43.1
CiPaw.09G150500 Carya illinoinensis HOM05D000604 ORTHO05D000990 3.2e-26 122.9 234 42.7
Rhsim04G0005200 Rhododendron simsii HOM05D000604 ORTHO05D000990 4.1e-26 122.5 211 42.2
Aqoxy6G01124 Aquilegia oxysepala HOM05D000604 ORTHO05D000990 1.2e-25 120.9 243 39.9
SGA_v2.0_scaffold186G40121 Striga asiatica HOM05D000604 ORTHO05D000990 1.2e-25 120.9 178 47.2
COL.COLO4_30927 Corchorus olitorius HOM05D000604 ORTHO05D000990 2.7e-25 119.8 233 42.5
RcHm_v2.0_Chr5g0026151 Rosa chinensis HOM05D000604 ORTHO05D000990 2.7e-25 119.8 190 44.7
Gohir.D10G048200 Gossypium hirsutum HOM05D000604 ORTHO05D000990 6.0e-25 118.6 231 42.0
Gorai.011G051300 Gossypium raimondii HOM05D000604 ORTHO05D000990 6.0e-25 118.6 231 42.0
Cpa.g.sc882.2 Carica papaya HOM05D000604 ORTHO05D000990 7.8e-25 118.2 238 43.7
Lj1C1245G4 Lonicera japonica HOM05D000604 ORTHO05D000990 1.0e-24 117.9 207 49.8
FvH4_3g15521 Fragaria vesca HOM05D000604 ORTHO05D000990 1.7e-24 117.1 190 43.2
Dinv00508 Davidia involucrata HOM05D000604 ORTHO05D000990 3.9e-24 115.9 233 42.5
Prupe.4G137700 Prunus persica HOM05D000604 ORTHO05D000990 3.9e-24 115.9 236 41.1
Cfa017348 Carpinus fangiana HOM05D000604 ORTHO05D000990 5.0e-24 115.5 229 41.0
MD05G1222500 Malus domestica HOM05D000604 ORTHO05D000990 5.0e-24 115.5 190 41.6
Gohir.A10G047001 Gossypium hirsutum HOM05D000604 ORTHO05D000990 6.6e-24 115.2 231 41.1
TPR.G33821 Trifolium pratense HOM05D000604 ORTHO05D000990 6.6e-24 115.2 223 41.7
TPR.G33823 Trifolium pratense HOM05D000604 ORTHO05D000990 6.6e-24 115.2 230 40.0
Thecc.06G135500 Theobroma cacao HOM05D000604 ORTHO05D000990 1.1e-23 114.4 233 42.1
Duzib235G1210 Durio zibethinus HOM05D000604 ORTHO05D000990 1.5e-23 114.0 234 41.0
QL09p051250 Quercus lobata HOM05D000604 ORTHO05D000990 1.9e-23 113.6 234 40.2
MD10G1204100 Malus domestica HOM05D000604 ORTHO05D000990 9.5e-23 111.3 172 43.6
DCAR_027661 Daucus carota HOM05D000604 ORTHO05D000990 1.6e-22 110.5 225 41.3
RcHm_v2.0_Chr5g0026141 Rosa chinensis HOM05D000604 ORTHO05D000990 1.6e-22 110.5 232 44.0
FAN25G0167 Fragaria x ananassa HOM05D000604 ORTHO05D000990 2.8e-22 109.8 192 42.7
Nitab4.5_0010625g0010 Nicotiana tabacum HOM05D000604 ORTHO05D000990 3.6e-22 109.4 239 36.0
CiPaw.10G111800 Carya illinoinensis HOM05D000604 ORTHO05D000990 4.7e-22 109.0 230 40.9
Solyc10g078180.3 Solanum lycopersicum HOM05D000604 ORTHO05D000990 4.7e-22 109.0 231 35.9
Sopen10g028860 Solanum pennellii HOM05D000604 ORTHO05D000990 4.7e-22 109.0 231 35.9
Duzib192G0430 Durio zibethinus HOM05D000604 ORTHO05D000990 6.2e-22 108.6 232 41.4
Nitab4.5_0000123g0280 Nicotiana tabacum HOM05D000604 ORTHO05D000990 8.1e-22 108.2 239 36.0
FAN16G3283 Fragaria x ananassa HOM05D000604 ORTHO05D000990 1.1e-21 107.8 189 42.9
AUR62024327 Chenopodium quinoa HOM05D000604 ORTHO05D000990 1.4e-21 107.5 201 40.3
PSO017G0977 Papaver somniferum HOM05D000604 ORTHO05D000990 2.3e-21 106.7 243 42.4
Haze_20822 Corylus avellana HOM05D000604 ORTHO05D000990 6.8e-21 105.1 225 40.4
ECA246G5101 Erigeron canadensis HOM05D000604 ORTHO05D000990 1.2e-20 104.4 212 42.5
Potri.003G148800 Populus trichocarpa HOM05D000604 ORTHO05D000990 1.2e-20 104.4 227 42.3
AUR62012067 Chenopodium quinoa HOM05D000604 ORTHO05D000990 1.5e-20 104.0 201 39.3
Potri.001G081600 Populus trichocarpa HOM05D000604 ORTHO05D000990 1.5e-20 104.0 231 40.7
Gorai.006G091600 Gossypium raimondii HOM05D000604 ORTHO05D000990 2.0e-20 103.6 230 40.0
PSO478G1429 Papaver somniferum HOM05D000604 ORTHO05D000990 2.6e-20 103.2 242 40.9
SGA_v2.0_scaffold154G37146 Striga asiatica HOM05D000604 ORTHO05D000990 2.6e-20 103.2 143 53.8
MD05G1222600 Malus domestica HOM05D000604 ORTHO05D000990 3.4e-20 102.8 224 41.1
Gohir.A09G076500 Gossypium hirsutum HOM05D000604 ORTHO05D000990 5.8e-20 102.1 230 40.0
Gohir.D09G076400 Gossypium hirsutum HOM05D000604 ORTHO05D000990 5.8e-20 102.1 230 39.6
Atru.chr10.624 Acer truncatum HOM05D000604 ORTHO05D000990 9.8e-20 101.3 223 41.3
unitig_52.g17175 Utricularia gibba HOM05D000604 ORTHO05D000990 2.2e-19 100.1 206 39.8
EL10Ac3g06948 Beta vulgaris HOM05D000604 ORTHO05D000990 2.9e-19 99.8 201 38.8
PSO541G1300 Papaver somniferum HOM05D000604 ORTHO05D000990 2.9e-19 99.8 212 39.2
Sabra01G0058800 Salix brachista HOM05D000604 ORTHO05D000990 2.9e-19 99.8 234 39.3
unitig_62.g23671 Utricularia gibba HOM05D000604 ORTHO05D000990 4.9e-19 99.0 174 43.1
Ciclev10004575m.g Citrus clementina HOM05D000604 ORTHO05D000990 6.4e-19 98.6 220 39.1
FAN11G0830 Fragaria x ananassa HOM05D000604 ORTHO05D000990 6.4e-19 98.6 233 40.3
FvH4_3g15520 Fragaria vesca HOM05D000604 ORTHO05D000990 1.4e-18 97.4 233 40.3
ClCG01G008990 Citrullus lanatus HOM05D000604 ORTHO05D000990 1.9e-18 97.1 241 39.4
Lj3g0019786 Lotus japonicus HOM05D000604 ORTHO05D000990 1.9e-18 97.1 179 42.5
TWI09G1628 Tripterygium wilfordii HOM05D000604 ORTHO05D000990 1.9e-18 97.1 236 39.8
TWI53G1067 Tripterygium wilfordii HOM05D000604 ORTHO05D000990 2.4e-18 96.7 231 39.8
Lj3g0011224 Lotus japonicus HOM05D000604 ORTHO05D000990 4.1e-18 95.9 261 36.4
Migut.D02542 Erythranthe guttata HOM05D000604 ORTHO05D000990 5.4e-18 95.5 178 45.5
FAN21G3921 Fragaria x ananassa HOM05D000604 ORTHO05D000990 5.4e-18 95.5 237 40.1
Sabra03G0108300 Salix brachista HOM05D000604 ORTHO05D000990 5.4e-18 95.5 223 38.6
Ca_18784_v3 Cicer arietinum L. HOM05D000604 ORTHO05D000990 1.6e-17 94.0 226 39.8
arahy.Tifrunner.gnm1.ann1.LZ6UUP Arachis hypogaea HOM05D000604 ORTHO05D000990 6.0e-17 92.0 230 37.4
arahy.Tifrunner.gnm1.ann1.MF3YPB Arachis hypogaea HOM05D000604 ORTHO05D000990 6.0e-17 92.0 230 37.4
GSVIVG01020280001 Vitis vinifera HOM05D000604 ORTHO05D000990 6.0e-17 92.0 225 38.2
Ah.04g152290 Amaranthus hybridus HOM05D000604 ORTHO05D000990 7.8e-17 91.7 173 40.5
Ca_25893_v3 Cicer arietinum L. HOM05D000604 ORTHO05D000990 3.0e-16 89.7 237 35.9
Cfa000744 Carpinus fangiana HOM05D000604 ORTHO05D000990 3.9e-16 89.4 221 38.5
Hund24787 Selenicereus undatus HOM05D000604 ORTHO05D000990 5.1e-16 89.0 184 38.0
MD10G1204200 Malus domestica HOM05D000604 ORTHO05D000990 6.6e-16 88.6 224 38.4
Aqoxy5G01616_Aqoxy5G01617 Aquilegia oxysepala HOM05D000604 ORTHO05D000990 1.1e-15 87.8 241 37.8
arahy.Tifrunner.gnm1.ann1.FFMP8K Arachis hypogaea HOM05D000604 ORTHO05D000990 1.1e-15 87.8 215 39.1
HanXRQChr06g0172701 Helianthus annuus HOM05D000604 ORTHO05D000990 1.5e-15 87.4 205 40.0
TWI73G0710 Tripterygium wilfordii HOM05D000604 ORTHO05D000990 4.3e-15 85.9 231 35.5
VMungo0251G0051 Vigna mungo HOM05D000604 ORTHO05D000990 5.6e-15 85.5 154 42.2
Eucgr.E01911 Eucalyptus grandis HOM05D000604 ORTHO05D000990 7.3e-15 85.1 230 37.4
Lalb_Chr03g0031731 Lupinus albus HOM05D000604 ORTHO05D000990 7.3e-15 85.1 161 42.9
HanXRQChr17g0537651 Helianthus annuus HOM05D000604 ORTHO05D000990 6.2e-14 82.0 198 39.9
MELO3C021786.2 Cucumis melo HOM05D000604 ORTHO05D000990 1.4e-13 80.9 240 38.3
CsaV3_1G046690 Cucumis sativus L. HOM05D000604 ORTHO05D000990 1.4e-13 80.9 237 36.3
Nn1g01904 Nelumbo nucifera HOM05D000604 ORTHO05D000990 1.4e-13 80.9 118 44.9
Sed0003721 Sechium edule HOM05D000604 ORTHO05D000990 3.1e-13 79.7 191 38.2
CsaV3_6G013630 Cucumis sativus L. HOM05D000604 ORTHO05D000990 6.8e-13 78.6 197 38.1
THA.LOC104812898 Tarenaya hassleriana HOM05D000604 ORTHO05D000990 6.8e-13 78.6 229 34.5
Lj4g0005998 Lotus japonicus HOM05D000604 ORTHO05D000990 8.9e-13 78.2 223 35.4
Peaxi162Scf00003g05382 Petunia axillaris HOM05D000604 ORTHO05D000990 8.9e-13 78.2 90 47.8
Phvul.003G138600 Phaseolus vulgaris HOM05D000604 ORTHO05D000990 8.9e-13 78.2 231 35.1
Lalb_Chr18g0057791 Lupinus albus HOM05D000604 ORTHO05D000990 1.5e-12 77.4 221 34.8
Zm00001eb001290 Zea mays HOM05D000604 ORTHO05D000990 1.3e-11 74.3 137 40.1
Aa31LG9G7950 Aethionema arabicum HOM05D000604 ORTHO05D000990 1.7e-11 73.9 201 36.8
MELO3C019652.2 Cucumis melo HOM05D000604 ORTHO05D000990 3.8e-11 72.8 198 37.4
CANSAT78G0138 Cannabis sativa HOM05D000604 ORTHO05D000990 4.9e-11 72.4 130 46.2
Sed0015153 Sechium edule HOM05D000604 ORTHO05D000990 4.9e-11 72.4 240 32.5
Zm00001eb428220 Zea mays HOM05D000604 ORTHO05D000990 6.4e-11 72.0 121 45.5
ClCG02G018570 Citrullus lanatus HOM05D000604 ORTHO05D000990 2.4e-10 70.1 193 37.8
PGR004G1493 Punica granatum HOM05D000604 ORTHO05D000990 2.4e-10 70.1 227 35.7
Lalb_Chr09g0328901 Lupinus albus HOM05D000604 ORTHO05D000990 7.1e-10 68.6 225 33.8
CDE01G0628 Ceratophyllum demersum HOM05D000604 ORTHO05D000990 9.2e-10 68.2 134 40.3
Sp2g10000 Schrenkiella parvula HOM05D000604 ORTHO05D000990 7.8e-09 65.1 160 38.8
THA.LOC104806208 Tarenaya hassleriana HOM05D000604 ORTHO05D000990 1.0e-08 64.7 215 34.0
Psat4g136040 Pisum sativum HOM05D000604 ORTHO05D000990 1.3e-08 64.3 234 31.2
MBI13_g05973_MAGBIO Magnolia biondii HOM05D000604 ORTHO05D000990 1.7e-08 63.9 153 39.2
Lsat_1_v5_gn_3_20820 Lactuca sativa HOM05D000604 ORTHO05D000990 6.6e-08 62.0 108 50.9
Hma1.2p1_0326F.1_g126230 Hydrangea macrophylla HOM05D000604 ORTHO05D000990 1.1e-07 61.2 110 44.5
CARHR226390 Cardamine hirsuta HOM05D000604 ORTHO05D000990 1.5e-07 60.8 150 40.0
Lalb_Chr15g0088661 Lupinus albus HOM05D000604 ORTHO05D000990 1.5e-07 60.8 220 36.4
MBI02_g32745_MAGBIO Magnolia biondii HOM05D000604 ORTHO05D000990 1.5e-07 60.8 170 35.9
TPR.G34064 Trifolium pratense HOM05D000604 ORTHO05D000990 1.5e-07 60.8 133 39.8
BcaC06g31569 Brassica carinata HOM05D000604 ORTHO05D000990 1.9e-07 60.5 195 34.9
Psat7g132800 Pisum sativum HOM05D000604 ORTHO05D000990 1.9e-07 60.5 268 31.0
THA.LOC104811369 Tarenaya hassleriana HOM05D000604 ORTHO05D000990 2.5e-07 60.1 182 34.1
MBI02_g43347_MAGBIO Magnolia biondii HOM05D000604 ORTHO05D000990 3.3e-07 59.7 153 37.3
AL8G14010 Arabidopsis lyrata HOM05D000604 ORTHO05D000990 4.3e-07 59.3 195 33.3
Medtr7g094060 Medicago truncatula HOM05D000604 ORTHO05D000990 5.6e-07 58.9 197 33.5
CARHR177350 Cardamine hirsuta HOM05D000604 ORTHO05D000990 7.3e-07 58.5 160 36.2
ECA240G3474 Erigeron canadensis HOM05D000604 ORTHO05D000990 7.3e-07 58.5 201 37.3
HanXRQChr13g0413231 Helianthus annuus HOM05D000604 ORTHO05D000990 9.6e-07 58.2 131 42.7
Atru.chr1.192 Acer truncatum HOM05D000604 ORTHO05D000990 1.6e-06 57.4 76 53.9
AT4G19600 Arabidopsis thaliana HOM05D000604 ORTHO05D000990 1.6e-06 57.4 146 39.7
AT5G45190 Arabidopsis thaliana HOM05D000604 ORTHO05D000990 2.1e-06 57.0 191 33.5
Os12g0485400 Oryza sativa ssp. japonica HOM05D000604 ORTHO05D000990 2.8e-06 56.6 176 31.8
Lsat_1_v5_gn_5_63320 Lactuca sativa HOM05D000604 ORTHO05D000990 3.6e-06 56.2 121 42.1
Carub.0007s2158 Capsella rubella HOM05D000604 ORTHO05D000990 8.1e-06 55.1 151 38.4
Thhalv10000834m.g Eutrema salsugineum HOM05D000604 ORTHO05D000990 8.1e-06 55.1 224 30.4
MBI19_g47815_MAGBIO Magnolia biondii HOM05D000604 ORTHO05D000990 8.1e-06 55.1 150 35.3


User provided reference genes

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