Gene: AT4G19600

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G19600
  • Transcript Identifier AT4G19600.1
  • Gene Type Coding gene
  • Location Chr4 : 10673619-10676532 : positive

Gene Family Information

  • ID HOM05D000604
  • #Genes/#Species 936/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G19600.1
  • symbol CYCT1%3B4
  • uniprot Q8GYM6

Descriptions

  • Description Cyclin family protein
  • Computational description CYCT1;4; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, response to virus, trichome morphogenesis, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 2421 Blast hits to 2391 proteins in 275 species: Archae - 2; Bacteria - 35; Metazoa - 1157; Fungi - 528; Plants - 373; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007346
ISO
PLAZA Integrative Orthologyregulation of mitotic cell cycle Solyc09g075760.4
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II1
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0051301
IEA
GOA Databasecell division
GO:0007049
IEA
GOA Databasecell cycle
GO:0050790
IEA
GOA Databaseregulation of catalytic activity
GO:0045737
IEA
GOA Databasepositive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0032786
IBA
Gene Ontologypositive regulation of DNA-templated transcription, elongation1
GO:0048366
IGI
Gene Ontologyleaf development2
GO:0010090
IMP
Gene Ontologytrichome morphogenesis2
GO:0009615
IEP
Gene Ontologyresponse to virus2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016538
IEA
GOA Databasecyclin-dependent protein serine/threonine kinase regulator activity
GO:0016538
IBA
Gene Ontologycyclin-dependent protein serine/threonine kinase regulator activity1
GO:0016538
IEA
InterProcyclin-dependent protein serine/threonine kinase regulator activity
GO:0061575
IBA
Gene Ontologycyclin-dependent protein serine/threonine kinase activator activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0008024
IBA
Gene Ontologycyclin/CDK positive transcription elongation factor complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013763 Cyclin-like
IPR043198 Cyclin/Cyclin-like subunit Ssn8
IPR006671 Cyclin, N-terminal
IPR036915 Cyclin-like superfamily
Mapman id Description
13.1.1.1.9 Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin activities.cyclin (CYCT)
15.3.2.1.2 RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II phosphorylation/dephosphorylation.CTDK-I protein kinase complex.T-class cyclin regulatory component