Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054397.1 Olea europaea HOM05D000078 ORTHO05D000025 8.1e-61 236.9 119 100.0
Oeu040531.1 Olea europaea HOM05D000078 ORTHO05D000025 3.1e-20 102.1 125 52.8
Sabra16G0020600 Salix brachista HOM05D000078 ORTHO05D000025 3.3e-14 82.0 133 43.6
Sabra16G0025400 Salix brachista HOM05D000078 ORTHO05D000025 3.3e-14 82.0 133 43.6
Rhsim03G0080400 Rhododendron simsii HOM05D000078 ORTHO05D000025 7.4e-14 80.9 128 46.1
Actinidia31286 Actinidia chinensis HOM05D000078 ORTHO05D000025 1.3e-13 80.1 129 45.7
Glyma.03G191800 Glycine max HOM05D000078 ORTHO05D000025 1.7e-13 79.7 131 48.1
Glyma.15G025100 Glycine max HOM05D000078 ORTHO05D000025 4.8e-13 78.2 131 47.3
FvH4_6g18000 Fragaria vesca HOM05D000078 ORTHO05D000025 8.2e-13 77.4 139 45.3
Glyma.19G192400 Glycine max HOM05D000078 ORTHO05D000025 8.2e-13 77.4 127 44.1
Potri.016G018600 Populus trichocarpa HOM05D000078 ORTHO05D000025 1.1e-12 77.0 128 43.0
Actinidia05451 Actinidia chinensis HOM05D000078 ORTHO05D000025 1.4e-12 76.6 132 42.4
FAN05G2716 Fragaria x ananassa HOM05D000078 ORTHO05D000025 1.4e-12 76.6 134 44.8
FAN14G1278 Fragaria x ananassa HOM05D000078 ORTHO05D000025 1.8e-12 76.3 134 45.5
Oeu033825.1 Olea europaea HOM05D000078 ORTHO05D000025 1.8e-12 76.3 126 43.7
Peaxi162Scf00163g00011 Petunia axillaris HOM05D000078 ORTHO05D000025 2.4e-12 75.9 141 39.7
Cfa016540 Carpinus fangiana HOM05D000078 ORTHO05D000025 3.1e-12 75.5 134 42.5
Potri.006G021000 Populus trichocarpa HOM05D000078 ORTHO05D000025 3.1e-12 75.5 127 41.7
Manes.08G021600 Manihot esculenta HOM05D000078 ORTHO05D000025 5.3e-12 74.7 134 45.5
Nitab4.5_0000132g0110 Nicotiana tabacum HOM05D000078 ORTHO05D000025 5.3e-12 74.7 137 40.9
Nitab4.5_0000963g0010 Nicotiana tabacum HOM05D000078 ORTHO05D000025 6.9e-12 74.3 142 42.3
Haze_19546 Corylus avellana HOM05D000078 ORTHO05D000025 9.1e-12 73.9 135 43.7
Lalb_Chr20g0112161 Lupinus albus HOM05D000078 ORTHO05D000025 9.1e-12 73.9 134 44.0
TAR284G0001 Trochodendron aralioides HOM05D000078 ORTHO05D000025 9.1e-12 73.9 133 40.6
FAN05G0718 Fragaria x ananassa HOM05D000078 ORTHO05D000025 1.2e-11 73.6 134 44.8
Phvul.001G187100 Phaseolus vulgaris HOM05D000078 ORTHO05D000025 1.2e-11 73.6 132 43.9
VMungo1383G1129 Vigna mungo HOM05D000078 ORTHO05D000025 1.5e-11 73.2 132 43.2
GSVIVG01033793001 Vitis vinifera HOM05D000078 ORTHO05D000025 1.5e-11 73.2 129 43.4
Nn2g14042 Nelumbo nucifera HOM05D000078 ORTHO05D000025 2.0e-11 72.8 141 41.1
MSTRG.19235 Avicennia marina HOM05D000078 ORTHO05D000025 3.4e-11 72.0 131 42.7
Gorai.002G241800 Gossypium raimondii HOM05D000078 ORTHO05D000025 3.4e-11 72.0 125 44.0
Lsat_1_v5_gn_1_51221 Lactuca sativa HOM05D000078 ORTHO05D000025 3.4e-11 72.0 128 43.8
Actinidia08430 Actinidia chinensis HOM05D000078 ORTHO05D000025 4.5e-11 71.6 125 43.2
CsaV3_3G036930 Cucumis sativus L. HOM05D000078 ORTHO05D000025 4.5e-11 71.6 138 39.1
Sed0015084 Sechium edule HOM05D000078 ORTHO05D000025 4.5e-11 71.6 134 41.0
MELO3C009441.2 Cucumis melo HOM05D000078 ORTHO05D000025 7.7e-11 70.9 138 39.9
Migut.L01761 Erythranthe guttata HOM05D000078 ORTHO05D000025 1.0e-10 70.5 150 39.3
Atru.chr8.1624 Acer truncatum HOM05D000078 ORTHO05D000025 1.7e-10 69.7 148 39.9
Actinidia10399 Actinidia chinensis HOM05D000722 ORTHO05D000590 1.7e-10 69.7 133 40.6
HanXRQChr14g0432531 Helianthus annuus HOM05D000078 ORTHO05D000025 1.7e-10 69.7 128 40.6
Hma1.2p1_0611F.1_g188720 Hydrangea macrophylla HOM05D000078 ORTHO05D000025 1.7e-10 69.7 129 42.6
MBI01_g22464_MAGBIO Magnolia biondii HOM05D000078 ORTHO05D000025 1.7e-10 69.7 129 39.5
Thecc.05G081800 Theobroma cacao HOM05D000078 ORTHO05D000025 1.7e-10 69.7 132 43.2
Ah.08g210880 Amaranthus hybridus HOM05D000078 ORTHO05D000025 2.2e-10 69.3 145 40.7
Dinv19835 Davidia involucrata HOM05D000078 ORTHO05D000025 2.2e-10 69.3 130 42.3
Duzib128G0736 Durio zibethinus HOM05D000078 ORTHO05D000025 2.2e-10 69.3 132 42.4
Nn6g34265 Nelumbo nucifera HOM05D000078 ORTHO05D000025 2.2e-10 69.3 141 37.6
RcHm_v2.0_Chr3g0472281 Rosa chinensis HOM05D000078 ORTHO05D000025 2.2e-10 69.3 134 42.5
PGSC0003DMG400045042 Solanum tuberosum HOM05D000078 ORTHO05D000025 2.2e-10 69.3 141 38.3
BcaB06g28943 Brassica carinata HOM05D000078 ORTHO05D000025 2.9e-10 68.9 128 40.6
COL.COLO4_29807 Corchorus olitorius HOM05D000078 ORTHO05D000025 2.9e-10 68.9 135 42.2
Duzib093G0484 Durio zibethinus HOM05D000078 ORTHO05D000025 2.9e-10 68.9 129 42.6
PSO384G3468 Papaver somniferum HOM05D000078 ORTHO05D000025 3.8e-10 68.6 148 39.9
SalBow3G4544 Salvia bowleyana HOM05D000078 ORTHO05D000025 5.0e-10 68.2 114 43.9
ClCG10G019260 Citrullus lanatus HOM05D000078 ORTHO05D000025 6.5e-10 67.8 136 39.7
Cc06_g05340 Coffea canephora HOM05D000078 ORTHO05D000025 6.5e-10 67.8 140 39.3
Gorai.002G159400 Gossypium raimondii HOM05D000078 ORTHO05D000025 6.5e-10 67.8 126 44.4
PSO339G4439 Papaver somniferum HOM05D000078 ORTHO05D000025 6.5e-10 67.8 148 37.2
Solyc10g083560.1 Solanum lycopersicum HOM05D000078 ORTHO05D000025 6.5e-10 67.8 144 38.2
Aqoxy4G02877 Aquilegia oxysepala HOM05D000078 ORTHO05D000025 8.5e-10 67.4 128 42.2
AT2G36450 Arabidopsis thaliana HOM05D000078 ORTHO05D000025 8.5e-10 67.4 137 39.4
A04p27980 Brassica napus HOM05D000078 ORTHO05D000025 8.5e-10 67.4 132 42.4
C04p65390 Brassica napus HOM05D000078 ORTHO05D000025 8.5e-10 67.4 132 42.4
BraA04t18286Z Brassica rapa HOM05D000078 ORTHO05D000025 8.5e-10 67.4 132 42.4
Sopen10g033030 Solanum pennellii HOM05D000078 ORTHO05D000025 8.5e-10 67.4 144 37.5
Lalb_Chr05g0225071 Lupinus albus HOM05D000078 ORTHO05D000025 1.1e-09 67.0 128 39.1
Gohir.D01G197700 Gossypium hirsutum HOM05D000078 ORTHO05D000025 1.4e-09 66.6 124 41.9
Nitab4.5_0004567g0020 Nicotiana tabacum HOM05D000078 ORTHO05D000025 1.9e-09 66.2 137 39.4
BcaC02g07591 Brassica carinata HOM05D000078 ORTHO05D000025 2.5e-09 65.9 128 39.8
BolC4t28028H Brassica oleracea HOM05D000722 ORTHO05D000025 2.5e-09 65.9 128 39.8
Glyma.10G066900 Glycine max HOM05D000078 ORTHO05D000025 2.5e-09 65.9 129 42.6
SalBow5G0737 Salvia bowleyana HOM05D000078 ORTHO05D000025 3.2e-09 65.5 131 42.0
CARHR130750 Cardamine hirsuta HOM05D000078 ORTHO05D000025 4.2e-09 65.1 139 38.8
Dinv21246 Davidia involucrata HOM05D000078 ORTHO05D000025 4.2e-09 65.1 136 38.2
Gohir.A01G138800 Gossypium hirsutum HOM05D000078 ORTHO05D000025 4.2e-09 65.1 127 43.3
PGSC0003DMG400002676 Solanum tuberosum HOM05D000078 ORTHO05D000025 4.2e-09 65.1 137 38.7
Lalb_Chr25g0288611 Lupinus albus HOM05D000078 ORTHO05D000025 5.5e-09 64.7 133 41.4
MD14G1017000 Malus domestica HOM05D000078 ORTHO05D000025 5.5e-09 64.7 144 38.9
Nn6g35028 Nelumbo nucifera HOM05D000078 ORTHO05D000025 5.5e-09 64.7 127 37.8
PGR142G4470 Punica granatum HOM05D000078 ORTHO05D000025 5.5e-09 64.7 139 39.6
Aa31LG5G21630 Aethionema arabicum HOM05D000078 ORTHO05D000025 7.2e-09 64.3 113 43.4
DCAR_007742 Daucus carota HOM05D000078 ORTHO05D000025 7.2e-09 64.3 142 38.7
Gohir.D01G128700 Gossypium hirsutum HOM05D000078 ORTHO05D000025 7.2e-09 64.3 126 43.7
Gorai.009G407200 Gossypium raimondii HOM05D000078 ORTHO05D000025 7.2e-09 64.3 133 38.3
AL4G32630 Arabidopsis lyrata HOM05D000078 ORTHO05D000025 9.4e-09 63.9 133 40.6
Cpa.g.sc5.71 Carica papaya HOM05D000078 ORTHO05D000025 9.4e-09 63.9 125 40.0
Lj1g0023655 Lotus japonicus HOM05D000078 ORTHO05D000025 1.2e-08 63.5 139 38.8
Sp4g18750 Schrenkiella parvula HOM05D000078 ORTHO05D000025 1.2e-08 63.5 136 41.2
Gohir.A04G065700 Gossypium hirsutum HOM05D000078 ORTHO05D000025 1.6e-08 63.2 137 38.7
Peaxi162Scf00068g00172 Petunia axillaris HOM05D000078 ORTHO05D000025 1.6e-08 63.2 134 39.6
Sopen09g003970 Solanum pennellii HOM05D000078 ORTHO05D000025 1.6e-08 63.2 136 37.5
Eucgr.K02071 Eucalyptus grandis HOM05D000078 ORTHO05D000025 2.1e-08 62.8 133 42.1
MD12G1019000 Malus domestica HOM05D000078 ORTHO05D000025 2.1e-08 62.8 140 40.7
Phvul.007G222600 Phaseolus vulgaris HOM05D000078 ORTHO05D000025 2.1e-08 62.8 132 43.9
Solyc09g009240.1 Solanum lycopersicum HOM05D000078 ORTHO05D000025 2.1e-08 62.8 132 35.6
Ciclev10012757m.g Citrus clementina HOM05D000078 ORTHO05D000025 2.7e-08 62.4 131 39.7
Lsat_1_v5_gn_2_20801 Lactuca sativa HOM05D000078 ORTHO05D000025 2.7e-08 62.4 130 37.7
EL10Ac7g16979 Beta vulgaris HOM05D000078 ORTHO05D000025 3.6e-08 62.0 139 39.6
Carub.0004s1826 Capsella rubella HOM05D000078 ORTHO05D000025 3.6e-08 62.0 114 43.9
TPR.G25371 Trifolium pratense HOM05D000078 ORTHO05D000025 3.6e-08 62.0 146 37.0
CiPaw.09G009300 Carya illinoinensis HOM05D000078 ORTHO05D000025 4.7e-08 61.6 132 39.4
MSTRG.25574 Avicennia marina HOM05D000078 ORTHO05D000025 6.1e-08 61.2 134 38.1
Manes.09G058852 Manihot esculenta HOM05D000078 ORTHO05D000025 6.1e-08 61.2 132 39.4
Ca_08970_v3 Cicer arietinum L. HOM05D000078 ORTHO05D000025 7.9e-08 60.8 139 38.1
TWI74G1156 Tripterygium wilfordii HOM05D000078 ORTHO05D000025 7.9e-08 60.8 151 35.1
HanXRQChr01g0028941 Helianthus annuus HOM05D000078 ORTHO05D000025 1.0e-07 60.5 143 37.8
Phvul.003G212700 Phaseolus vulgaris HOM05D000078 ORTHO05D000025 1.0e-07 60.5 131 37.4
VMungo1215G3186 Vigna mungo HOM05D000078 ORTHO05D000025 1.0e-07 60.5 142 35.9
Sc19g0002620 Simmondsia chinensis HOM05D000078 ORTHO05D000025 1.4e-07 60.1 121 38.0
VMungo0720G2376 Vigna mungo HOM05D000078 ORTHO05D000025 1.4e-07 60.1 132 42.4
Thhalv10017537m.g Eutrema salsugineum HOM05D000078 ORTHO05D000025 1.8e-07 59.7 139 36.0
HanXRQChr03g0085871 Helianthus annuus HOM05D000078 ORTHO05D000025 1.8e-07 59.7 132 34.1
Psat3g035520 Pisum sativum HOM05D000078 ORTHO05D000025 1.8e-07 59.7 147 36.7
TWI53G1484 Tripterygium wilfordii HOM05D000078 ORTHO05D000025 1.8e-07 59.7 115 41.7
Glyma.13G151900 Glycine max HOM05D000078 ORTHO05D000025 2.3e-07 59.3 129 40.3
Lj4g0028148 Lotus japonicus HOM05D000078 ORTHO05D000025 2.3e-07 59.3 136 34.6
PSO384G1096 Papaver somniferum HOM05D000078 ORTHO05D000025 2.3e-07 59.3 140 38.6
Glyma.17G131800 Glycine max HOM05D000078 ORTHO05D000025 3.0e-07 58.9 130 36.2
Prupe.7G116300 Prunus persica HOM05D000078 ORTHO05D000025 3.0e-07 58.9 138 34.8
SGA_v2.0_scaffold184G39933 Striga asiatica HOM05D000078 ORTHO05D000025 3.0e-07 58.9 118 36.4
ClCG04G009800 Citrullus lanatus HOM05D000078 ORTHO05D000025 3.9e-07 58.5 137 37.2
Ciclev10023840m.g Citrus clementina HOM05D000078 ORTHO05D000025 3.9e-07 58.5 130 36.9
Gohir.D04G103600 Gossypium hirsutum HOM05D000078 ORTHO05D000025 3.9e-07 58.5 133 37.6
Oeu059061.1 Olea europaea HOM05D000078 ORTHO05D000025 3.9e-07 58.5 136 36.8
CiPaw.10G006000 Carya illinoinensis HOM05D000078 ORTHO05D000025 5.1e-07 58.2 132 40.2
CDE12G0007 Ceratophyllum demersum HOM05D000078 ORTHO05D000025 5.1e-07 58.2 126 36.5
ClCG01G003110 Citrullus lanatus HOM05D000078 ORTHO05D000025 5.1e-07 58.2 135 34.8
PSO443G0026 Papaver somniferum HOM05D000078 ORTHO05D000025 5.1e-07 58.2 147 35.4
PGR004G1507 Punica granatum HOM05D000078 ORTHO05D000025 5.1e-07 58.2 129 36.4
Atru.chr9.1541 Acer truncatum HOM05D000078 ORTHO05D000025 6.7e-07 57.8 133 35.3
Migut.J00978 Erythranthe guttata HOM05D000078 ORTHO05D000025 6.7e-07 57.8 34 85.3
Nn1g01346 Nelumbo nucifera HOM05D000078 ORTHO05D000025 6.7e-07 57.8 135 36.3
Nitab4.5_0000953g0020 Nicotiana tabacum HOM05D000078 ORTHO05D000025 6.7e-07 57.8 124 37.9
A03p20160 Brassica napus HOM05D000078 ORTHO05D000025 8.8e-07 57.4 114 37.7
BolC4t22811H Brassica oleracea HOM05D000078 ORTHO05D000025 8.8e-07 57.4 34 85.3
QL02p030620 Quercus lobata HOM05D000078 ORTHO05D000025 8.8e-07 57.4 128 35.2
THA.LOC104824533 Tarenaya hassleriana HOM05D000078 ORTHO05D000025 8.8e-07 57.4 34 82.4
BraA03t11266Z Brassica rapa HOM05D000078 ORTHO05D000025 1.1e-06 57.0 114 37.7
ECA248G3377 Erigeron canadensis HOM05D000078 ORTHO05D000025 1.1e-06 57.0 134 39.6
Eucgr.A01537 Eucalyptus grandis HOM05D000078 ORTHO05D000025 1.1e-06 57.0 134 36.6
BcaB01g03832 Brassica carinata HOM05D000078 ORTHO05D000025 1.5e-06 56.6 34 82.4
BcaC02g11762 Brassica carinata HOM05D000078 ORTHO05D000025 1.5e-06 56.6 139 38.8
C04p11620 Brassica napus HOM05D000078 ORTHO05D000025 1.5e-06 56.6 139 38.8
Gohir.D08G197200 Gossypium hirsutum HOM05D000078 ORTHO05D000025 1.5e-06 56.6 128 35.2
Gorai.004G208000 Gossypium raimondii HOM05D000078 ORTHO05D000025 1.5e-06 56.6 128 35.2
Hma1.2p1_0138F.1_g062580 Hydrangea macrophylla HOM05D000078 ORTHO05D000025 1.5e-06 56.6 136 35.3
Thecc.03G271100 Theobroma cacao HOM05D000078 ORTHO05D000025 1.5e-06 56.6 130 36.9
CARHR048580 Cardamine hirsuta HOM05D000078 ORTHO05D000025 2.0e-06 56.2 131 32.8
CsaV3_5G003240 Cucumis sativus L. HOM05D000078 ORTHO05D000025 2.0e-06 56.2 133 31.6
Lj1P992T40 Lonicera japonica HOM05D000078 ORTHO05D000025 2.0e-06 56.2 124 37.9
MD01G1196300 Malus domestica HOM05D000078 ORTHO05D000025 2.0e-06 56.2 131 33.6
QL09p015769 Quercus lobata HOM05D000078 ORTHO05D000025 2.0e-06 56.2 128 35.2
TAR374G1564 Trochodendron aralioides HOM05D000078 ORTHO05D000025 2.0e-06 56.2 140 35.0
THA.LOC104824472 Tarenaya hassleriana HOM05D000078 ORTHO05D000025 2.6e-06 55.8 35 80.0
unitig_744.g24330 Utricularia gibba HOM05D000078 ORTHO05D000025 2.6e-06 55.8 122 37.7
CiPaw.12G098500 Carya illinoinensis HOM05D000078 ORTHO05D000025 3.3e-06 55.5 143 36.4
DCAR_006761 Daucus carota HOM05D000078 ORTHO05D000025 3.3e-06 55.5 132 34.8
Sed0002692 Sechium edule HOM05D000078 ORTHO05D000025 3.3e-06 55.5 126 35.7
TWI39G0653 Tripterygium wilfordii HOM05D000078 ORTHO05D000025 3.3e-06 55.5 125 38.4
HPP92_020988 Vanilla planifolia HOM05D000078 ORTHO05D000025 3.3e-06 55.5 119 37.0
BcaC01g05656 Brassica carinata HOM05D000078 ORTHO05D000025 4.4e-06 55.1 114 36.8
C03p23610 Brassica napus HOM05D000078 ORTHO05D000025 4.4e-06 55.1 114 36.8
BolC3t14756H Brassica oleracea HOM05D000078 ORTHO05D000025 4.4e-06 55.1 114 36.8
Lj1P992T52 Lonicera japonica HOM05D000078 ORTHO05D000025 4.4e-06 55.1 121 33.1
MBI03_g28425_MAGBIO Magnolia biondii HOM05D000078 ORTHO05D000025 4.4e-06 55.1 129 34.1
Medtr4g102670 Medicago truncatula HOM05D000078 ORTHO05D000025 4.4e-06 55.1 138 34.8
TAR656G0003 Trochodendron aralioides HOM05D000078 ORTHO05D000025 4.4e-06 55.1 133 37.6
Aa31LG2G530 Aethionema arabicum HOM05D000078 ORTHO05D000025 5.7e-06 54.7 126 32.5
Haze_13763 Corylus avellana HOM05D000078 ORTHO05D000025 5.7e-06 54.7 117 33.3
Dinv35174 Davidia involucrata HOM05D000078 ORTHO05D000025 5.7e-06 54.7 128 36.7
Gohir.A03G015966 Gossypium hirsutum HOM05D000078 ORTHO05D000025 5.7e-06 54.7 143 32.2
Gohir.A12G225000 Gossypium hirsutum HOM05D000078 ORTHO05D000025 5.7e-06 54.7 131 38.9
Gorai.008G243700 Gossypium raimondii HOM05D000078 ORTHO05D000025 5.7e-06 54.7 127 37.0
Hma1.2p1_0270F.1_g108490 Hydrangea macrophylla HOM05D000078 ORTHO05D000025 5.7e-06 54.7 140 35.7
Lj2P196T13 Lonicera japonica HOM05D000078 ORTHO05D000025 5.7e-06 54.7 123 36.6
Actinidia02044 Actinidia chinensis HOM05D000078 ORTHO05D000025 7.4e-06 54.3 125 35.2
AT5G52020 Arabidopsis thaliana HOM05D000078 ORTHO05D000025 7.4e-06 54.3 143 32.9
Thhalv10014566m.g Eutrema salsugineum HOM05D000078 ORTHO05D000025 7.4e-06 54.3 133 35.3
Gohir.D12G227700 Gossypium hirsutum HOM05D000078 ORTHO05D000025 7.4e-06 54.3 127 37.0
Lj2P130T29 Lonicera japonica HOM05D000078 ORTHO05D000025 7.4e-06 54.3 109 41.3
Psat4g067360 Pisum sativum HOM05D000078 ORTHO05D000025 7.4e-06 54.3 126 37.3
BcaB08g35557 Brassica carinata HOM05D000078 ORTHO05D000025 9.7e-06 53.9 146 32.9
Gohir.A08G178700 Gossypium hirsutum HOM05D000078 ORTHO05D000025 9.7e-06 53.9 128 33.6
Nitab4.5_0000412g0010 Nicotiana tabacum HOM05D000078 ORTHO05D000025 9.7e-06 53.9 129 33.3
Psat4g067240 Pisum sativum HOM05D000078 ORTHO05D000025 9.7e-06 53.9 136 36.0
Sp6g14260 Schrenkiella parvula HOM05D000078 ORTHO05D000025 9.7e-06 53.9 131 36.6
TWI81G1027 Tripterygium wilfordii HOM05D000078 ORTHO05D000025 9.7e-06 53.9 141 34.8
TAR636G1496 Trochodendron aralioides HOM05D000078 ORTHO05D000025 9.7e-06 53.9 140 34.3


User provided reference genes

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