Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053518.1 Olea europaea HOM05D004585 ORTHO05D005640 1.5e-21 105.1 50 100.0
Oeu046197.1 Olea europaea HOM05D004585 ORTHO05D005640 3.8e-20 100.5 49 91.8
Oeu027977.1 Olea europaea HOM05D004585 ORTHO05D005640 2.1e-18 94.7 49 89.8
Actinidia18578 Actinidia chinensis HOM05D004585 ORTHO05D005640 1.8e-17 91.7 49 81.6
Solyc06g074720.4 Solanum lycopersicum HOM05D004585 ORTHO05D005640 2.3e-17 91.3 49 83.7
PGSC0003DMG400007128 Solanum tuberosum HOM05D004585 ORTHO05D005640 3.9e-17 90.5 49 83.7
Sopen06g031130 Solanum pennellii HOM05D004585 ORTHO05D005640 6.7e-17 89.7 49 81.6
Nitab4.5_0000442g0080 Nicotiana tabacum HOM05D004585 ORTHO05D005640 8.8e-17 89.4 49 79.6
Peaxi162Scf00150g00411 Petunia axillaris HOM05D004585 ORTHO05D005640 8.8e-17 89.4 49 79.6
Sopen11g026360 Solanum pennellii HOM05D004585 ORTHO05D005640 8.8e-17 89.4 49 79.6
PGSC0003DMG400000462 Solanum tuberosum HOM05D004585 ORTHO05D005640 8.8e-17 89.4 49 79.6
CSS0035600 Camellia sinensis var. sinensis HOM05D000239 ORTHO05D000484 1.1e-16 89.0 49 77.6
Sc09g0005570 Simmondsia chinensis HOM05D004585 ORTHO05D005640 1.1e-16 89.0 49 79.6
Migut.F01706 Erythranthe guttata HOM05D004585 ORTHO05D005640 1.5e-16 88.6 49 81.6
Cc02_g10240 Coffea canephora HOM05D004585 ORTHO05D005640 2.0e-16 88.2 49 79.6
Nitab4.5_0003470g0110 Nicotiana tabacum HOM05D004585 ORTHO05D005640 2.0e-16 88.2 49 81.6
Hund13887 Selenicereus undatus HOM05D004585 ORTHO05D005640 2.5e-16 87.8 49 79.6
MSTRG.412 Avicennia marina HOM05D004585 ORTHO05D005640 3.3e-16 87.4 49 79.6
SGA_v2.0_scaffold10G05319 Striga asiatica HOM05D004585 ORTHO05D005640 3.3e-16 87.4 49 79.6
SGA_v2.0_scaffold113G31721 Striga asiatica HOM05D004585 ORTHO05D005640 3.3e-16 87.4 49 79.6
SGA_v2.0_scaffold154G37190 Striga asiatica HOM05D004585 ORTHO05D005640 3.3e-16 87.4 49 79.6
TAR633G1318 Trochodendron aralioides HOM05D004585 ORTHO05D005640 3.3e-16 87.4 49 75.5
arahy.Tifrunner.gnm1.ann1.48LUDE Arachis hypogaea HOM05D004585 ORTHO05D005640 4.3e-16 87.0 49 77.6
arahy.Tifrunner.gnm1.ann1.CB8VHN Arachis hypogaea HOM05D004585 ORTHO05D005640 4.3e-16 87.0 49 77.6
Glyma.02G173000 Glycine max HOM05D004585 ORTHO05D005640 5.7e-16 86.7 49 77.6
Glyma.09G111400 Glycine max HOM05D004585 ORTHO05D005640 5.7e-16 86.7 49 77.6
Rhsim03G0106100 Rhododendron simsii HOM05D004585 ORTHO05D005640 5.7e-16 86.7 49 77.6
vmacro21510 Vaccinium macrocarpon HOM05D004585 ORTHO05D005640 5.7e-16 86.7 49 77.6
GSVIVG01021851001 Vitis vinifera HOM05D004585 ORTHO05D005640 5.7e-16 86.7 49 75.5
Actinidia06707 Actinidia chinensis HOM05D004585 ORTHO05D005640 7.4e-16 86.3 49 77.6
DCAR_012470 Daucus carota HOM05D004585 ORTHO05D005640 7.4e-16 86.3 49 77.6
PSO210G0756 Papaver somniferum HOM05D004585 ORTHO05D005640 7.4e-16 86.3 49 77.6
ClCG08G008100 Citrullus lanatus HOM05D004585 ORTHO05D005640 9.7e-16 85.9 49 77.6
THA.LOC104816458 Tarenaya hassleriana HOM05D004585 ORTHO05D005640 9.7e-16 85.9 49 77.6
Lj3A931T47 Lonicera japonica HOM05D004585 ORTHO05D005640 1.3e-15 85.5 49 77.6
Phvul.005G089300 Phaseolus vulgaris HOM05D004585 ORTHO05D005640 1.3e-15 85.5 49 73.5
PGR142G4346 Punica granatum HOM05D004585 ORTHO05D005640 1.3e-15 85.5 49 75.5
Sed0007729 Sechium edule HOM05D004585 ORTHO05D005640 1.3e-15 85.5 49 75.5
Sed0016970 Sechium edule HOM05D004585 ORTHO05D005640 1.3e-15 85.5 49 75.5
VMungo1080G1669 Vigna mungo HOM05D004585 ORTHO05D005640 1.3e-15 85.5 49 73.5
Ah.03g136890 Amaranthus hybridus HOM05D004585 ORTHO05D005640 1.7e-15 85.1 49 75.5
Dinv20840 Davidia involucrata HOM05D004585 ORTHO05D005640 1.7e-15 85.1 50 78.0
PSO675G5749 Papaver somniferum HOM05D004585 ORTHO05D005640 1.7e-15 85.1 49 75.5
PSO717G0039 Papaver somniferum HOM05D004585 ORTHO05D005640 1.7e-15 85.1 49 75.5
MELO3C019883.2 Cucumis melo HOM05D004585 ORTHO05D005640 2.2e-15 84.7 49 75.5
Medtr1g108290 Medicago truncatula HOM05D004585 ORTHO05D005640 2.2e-15 84.7 49 75.5
TPR.G4853 Trifolium pratense HOM05D004585 ORTHO05D005640 2.2e-15 84.7 49 75.5
Lalb_Chr14g0365991 Lupinus albus HOM05D004585 ORTHO05D005640 2.8e-15 84.3 49 73.5
Medtr4g127330 Medicago truncatula HOM05D004585 ORTHO05D005640 2.8e-15 84.3 49 73.5
Hund06922 Selenicereus undatus HOM05D004585 ORTHO05D005640 2.8e-15 84.3 49 73.5
Ca_04982_v3 Cicer arietinum L. HOM05D004585 ORTHO05D005640 3.7e-15 84.0 49 75.5
Ca_11096_v3 Cicer arietinum L. HOM05D004585 ORTHO05D005640 3.7e-15 84.0 49 75.5
Eucgr.G02711 Eucalyptus grandis HOM05D004585 ORTHO05D005640 3.7e-15 84.0 49 71.4
PSO173G0033 Papaver somniferum HOM05D004585 ORTHO05D005640 3.7e-15 84.0 49 73.5
Psat6g221600 Pisum sativum HOM05D004585 ORTHO05D005640 3.7e-15 84.0 49 73.5
TPR.G31410 Trifolium pratense HOM05D004585 ORTHO05D005640 3.7e-15 84.0 49 73.5
EL10Ac2g03709 Beta vulgaris HOM05D004585 ORTHO05D005640 4.8e-15 83.6 49 71.4
EL10Ac4g08678 Beta vulgaris HOM05D004585 ORTHO05D005640 4.8e-15 83.6 49 71.4
Cpa.g.sc128.48 Carica papaya HOM05D004585 ORTHO05D005640 4.8e-15 83.6 49 73.5
CsaV3_6G004080 Cucumis sativus L. HOM05D004585 ORTHO05D005640 4.8e-15 83.6 49 73.5
Hma1.2p1_0026F.1_g016750 Hydrangea macrophylla HOM05D004585 ORTHO05D005640 4.8e-15 83.6 49 71.4
Hma1.2p1_0567F.1_g180100 Hydrangea macrophylla HOM05D004585 ORTHO05D005640 4.8e-15 83.6 49 71.4
CiPaw.01G204400 Carya illinoinensis HOM05D004585 ORTHO05D005640 6.3e-15 83.2 48 75.0
HanXRQChr10g0319081 Helianthus annuus HOM05D004585 ORTHO05D005640 6.3e-15 83.2 49 73.5
Lj6g0027575 Lotus japonicus HOM05D004585 ORTHO05D005640 6.3e-15 83.2 49 73.5
QL04p041242 Quercus lobata HOM05D004585 ORTHO05D005640 6.3e-15 83.2 48 75.0
TAR633G2635 Trochodendron aralioides HOM05D004585 ORTHO05D005640 6.3e-15 83.2 49 71.4
CSS0012030 Camellia sinensis var. sinensis HOM05D004585 ORTHO05D005640 8.2e-15 82.8 47 74.5
Lj9A82T44 Lonicera japonica HOM05D004585 ORTHO05D005640 8.2e-15 82.8 46 80.4
THA.LOC104823192 Tarenaya hassleriana HOM05D004585 ORTHO05D005640 8.2e-15 82.8 49 75.5
Ah.16g102420 Amaranthus hybridus HOM05D004585 ORTHO05D005640 1.1e-14 82.4 50 76.0
Cfa011225 Carpinus fangiana HOM05D004585 ORTHO05D005640 1.1e-14 82.4 48 72.9
Haze_02611 Corylus avellana HOM05D004585 ORTHO05D005640 1.1e-14 82.4 48 72.9
Haze_22178 Corylus avellana HOM05D004585 ORTHO05D005640 1.1e-14 82.4 48 72.9
HanXRQChr14g0456901 Helianthus annuus HOM05D004585 ORTHO05D005640 1.1e-14 82.4 49 73.5
Lj6g0005217 Lotus japonicus HOM05D004585 ORTHO05D005640 1.1e-14 82.4 49 73.5
Os08g0412200 Oryza sativa ssp. japonica HOM05D004585 ORTHO05D005640 1.1e-14 82.4 49 69.4
Prupe.1G580700 Prunus persica HOM05D004585 ORTHO05D005640 1.1e-14 82.4 49 75.5
ATR0068G115 Amborella trichopoda HOM05D004585 ORTHO05D005640 1.4e-14 82.0 49 69.4
AUR62003699 Chenopodium quinoa HOM05D004585 ORTHO05D005640 1.4e-14 82.0 49 73.5
MD08G1243300 Malus domestica HOM05D004585 ORTHO05D005640 1.4e-14 82.0 49 71.4
ECA238G4124 Erigeron canadensis HOM05D004585 ORTHO05D005640 1.8e-14 81.6 49 71.4
Lalb_Chr22g0354511 Lupinus albus HOM05D004585 ORTHO05D005640 1.8e-14 81.6 49 71.4
EL10Ac4g08675 Beta vulgaris HOM05D004585 ORTHO05D005640 3.1e-14 80.9 49 69.4
Potri.010G234800 Populus trichocarpa HOM05D004585 ORTHO05D005640 4.1e-14 80.5 49 71.4
Cfa013557 Carpinus fangiana HOM05D004585 ORTHO05D005640 6.9e-14 79.7 48 70.8
SalBow6G2458 Salvia bowleyana HOM05D004585 ORTHO05D005640 6.9e-14 79.7 46 76.1
Zm00001eb178930 Zea mays HOM05D004585 ORTHO05D005640 6.9e-14 79.7 49 71.4
CDE02G2408 Ceratophyllum demersum HOM05D000251 ORTHO05D002506 9.1e-14 79.3 49 65.3
CDE04G0123 Ceratophyllum demersum HOM05D004585 ORTHO05D005640 9.1e-14 79.3 49 65.3
Gohir.D13G012100 Gossypium hirsutum HOM05D004585 ORTHO05D005640 9.1e-14 79.3 49 67.3
Gorai.013G013300 Gossypium raimondii HOM05D004585 ORTHO05D005640 9.1e-14 79.3 49 67.3
Manes.05G202500 Manihot esculenta HOM05D004585 ORTHO05D005640 9.1e-14 79.3 49 69.4
Thecc.10G109700 Theobroma cacao HOM05D004585 ORTHO05D005640 9.1e-14 79.3 49 67.3
Thecc.K0008500 Theobroma cacao HOM05D004585 ORTHO05D005640 9.1e-14 79.3 49 67.3
AagrBONN_evm.TU.Sc2ySwM_228.827 Anthoceros agrestis HOM05D004585 ORTHO05D005640 1.5e-13 78.6 47 72.3
Gohir.A13G011400 Gossypium hirsutum HOM05D004585 ORTHO05D005640 2.0e-13 78.2 49 65.3
FvH4_5g27351 Fragaria vesca HOM05D004585 ORTHO05D005640 2.6e-13 77.8 49 69.4
FAN26G1691 Fragaria x ananassa HOM05D004585 ORTHO05D005640 3.4e-13 77.4 49 69.4
RcHm_v2.0_Chr4g0433501 Rosa chinensis HOM05D004585 ORTHO05D005640 3.4e-13 77.4 49 71.4
Sp6g38180 Schrenkiella parvula HOM05D004585 ORTHO05D005640 4.5e-13 77.0 49 61.2
Aa31LG3G3420 Aethionema arabicum HOM05D004585 ORTHO05D005640 7.7e-13 76.3 49 67.3
Nn3g20167 Nelumbo nucifera HOM05D004585 ORTHO05D005640 7.7e-13 76.3 48 68.8
Sabra10G0182000 Salix brachista HOM05D004585 ORTHO05D005640 7.7e-13 76.3 49 67.3
COL.COLO4_27310 Corchorus olitorius HOM05D004585 ORTHO05D005640 1.0e-12 75.9 48 64.6
COL.COLO4_33895 Corchorus olitorius HOM05D004585 ORTHO05D005640 1.0e-12 75.9 49 63.3
Lsat_1_v5_gn_2_86220 Lactuca sativa HOM05D004585 ORTHO05D005640 1.0e-12 75.9 49 65.3
Pp3c8_3240 Physcomitrium patens HOM05D004585 ORTHO05D005640 1.0e-12 75.9 49 65.3
HPP92_008213 Vanilla planifolia HOM05D004585 ORTHO05D005640 1.3e-12 75.5 49 61.2
Duzib128G1105 Durio zibethinus HOM05D004585 ORTHO05D005640 2.2e-12 74.7 54 61.1
Pp3c3_32540 Physcomitrium patens HOM05D004585 ORTHO05D005640 2.9e-12 74.3 49 65.3
CANSAT56G4487 Cannabis sativa HOM05D004585 ORTHO05D005640 5.0e-12 73.6 49 63.3
Atru.chr12.969 Acer truncatum HOM05D004585 ORTHO05D005640 6.5e-12 73.2 49 63.3
Ciclev10013752m.g Citrus clementina HOM05D004585 ORTHO05D005640 8.5e-12 72.8 51 64.7
TWI38G0710 Tripterygium wilfordii HOM05D004585 ORTHO05D005640 8.5e-12 72.8 49 61.2
Thhalv10014607m.g Eutrema salsugineum HOM05D004585 ORTHO05D005640 1.1e-11 72.4 49 57.1
BraA02t04819Z Brassica rapa HOM05D004585 ORTHO05D005640 1.4e-11 72.0 49 57.1
Ciclev10033004m.g Citrus clementina HOM05D004585 ORTHO05D005640 1.9e-11 71.6 49 61.2
Mapoly0059s0023 Marchantia polymorpha HOM05D004585 ORTHO05D005640 1.9e-11 71.6 49 61.2
SMO117G0347 Selaginella moellendorffii HOM05D004585 ORTHO05D005640 1.9e-11 71.6 49 57.1
AL6G14230 Arabidopsis lyrata HOM05D004585 ORTHO05D005640 5.5e-11 70.1 49 55.1
AT5G04600 Arabidopsis thaliana HOM05D004585 ORTHO05D005640 5.5e-11 70.1 49 55.1
Carub.0006s0352 Capsella rubella HOM05D004585 ORTHO05D005640 5.5e-11 70.1 49 55.1
BcaC03g12939 Brassica carinata HOM05D004585 ORTHO05D005640 7.2e-11 69.7 49 55.1
BcaC06g32168 Brassica carinata HOM05D004585 ORTHO05D005640 7.2e-11 69.7 49 55.1
A10p31500 Brassica napus HOM05D004585 ORTHO05D005640 7.2e-11 69.7 49 55.1
C02p02000 Brassica napus HOM05D004585 ORTHO05D005640 7.2e-11 69.7 49 55.1
C09p72190 Brassica napus HOM05D004585 ORTHO05D005640 7.2e-11 69.7 49 55.1
BolC2t06157H Brassica oleracea HOM05D004585 ORTHO05D005640 7.2e-11 69.7 49 55.1
BolC9t59963H Brassica oleracea HOM05D004585 ORTHO05D005640 7.2e-11 69.7 49 55.1
BraA10t45196Z Brassica rapa HOM05D004585 ORTHO05D005640 7.2e-11 69.7 49 55.1
CARHR208690 Cardamine hirsuta HOM05D004585 ORTHO05D005640 1.2e-10 68.9 49 55.1
Atru.chr10.1244 Acer truncatum HOM05D004585 ORTHO05D005640 1.6e-10 68.6 50 62.0
MCO05G308 Micromonas commoda HOM05D004585 ORTHO05D005640 4.7e-10 67.0 49 55.1
CBR_g11154 Chara braunii HOM05D004585 ORTHO05D005640 3.9e-09 63.9 46 56.5
Cfa021710 Carpinus fangiana HOM05D004585 ORTHO05D005640 5.7e-08 60.1 49 51.0
PRCOL_00003387 Prasinoderma coloniale HOM05D004585 ORTHO05D005640 1.7e-07 58.5 49 49.0
Dinv30656 Davidia involucrata HOM05D004585 ORTHO05D005640 1.8e-06 55.1 49 57.1
Cre08.g368500 Chlamydomonas reinhardtii HOM05D004585 ORTHO05D005640 3.1e-06 54.3 49 42.9


User provided reference genes

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