Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052389.2 Olea europaea HOM05D005404 ORTHO05D006623 4.4e-69 264.6 143 100.0
Cc00_g15980 Coffea canephora HOM05D005404 ORTHO05D006623 2.0e-34 149.4 142 66.2
Nn4g26481 Nelumbo nucifera HOM05D005404 ORTHO05D006623 1.7e-33 146.4 142 64.1
GSVIVG01021395001 Vitis vinifera HOM05D005404 ORTHO05D006623 3.8e-33 145.2 142 64.1
Aqoxy4G00127 Aquilegia oxysepala HOM05D005404 ORTHO05D006623 5.0e-33 144.8 142 64.8
PSO017G4964 Papaver somniferum HOM05D005404 ORTHO05D006623 5.0e-33 144.8 142 64.8
Duzib101G0001 Durio zibethinus HOM05D005404 ORTHO05D006623 6.6e-33 144.4 142 64.1
Duzib192G1075 Durio zibethinus HOM05D005404 ORTHO05D006623 6.6e-33 144.4 142 64.1
CANSAT35G0205 Cannabis sativa HOM05D005404 ORTHO05D006623 1.1e-32 143.7 142 63.4
COL.COLO4_07492 Corchorus olitorius HOM05D005404 ORTHO05D006623 1.5e-32 143.3 142 64.1
Duzib160G0646 Durio zibethinus HOM05D005404 ORTHO05D006623 1.5e-32 143.3 142 62.7
Rhsim02G0154900 Rhododendron simsii HOM05D005404 ORTHO05D006623 1.5e-32 143.3 142 63.4
TAR626G1892 Trochodendron aralioides HOM05D005404 ORTHO05D006623 1.5e-32 143.3 142 62.7
PSO170G1289 Papaver somniferum HOM05D005404 ORTHO05D006623 1.9e-32 142.9 142 64.1
Thecc.06G156200 Theobroma cacao HOM05D005404 ORTHO05D006623 1.9e-32 142.9 142 62.7
MSTRG.16208 Avicennia marina HOM05D005404 ORTHO05D006623 3.3e-32 142.1 143 63.6
Eucgr.E02375 Eucalyptus grandis HOM05D005404 ORTHO05D006623 3.3e-32 142.1 142 63.4
arahy.Tifrunner.gnm1.ann1.HITJ74 Arachis hypogaea HOM05D005404 ORTHO05D006623 4.3e-32 141.7 142 62.0
Haze_05531 Corylus avellana HOM05D005404 ORTHO05D006623 4.3e-32 141.7 142 63.4
Gohir.D10G039300 Gossypium hirsutum HOM05D005404 ORTHO05D006623 4.3e-32 141.7 142 63.4
Gorai.011G041300 Gossypium raimondii HOM05D005404 ORTHO05D006623 4.3e-32 141.7 142 63.4
unitig_26.g10094 Utricularia gibba HOM05D005404 ORTHO05D006623 4.3e-32 141.7 143 62.9
Duzib235G1537 Durio zibethinus HOM05D005404 ORTHO05D006623 5.6e-32 141.4 142 62.7
SGA_v2.0_scaffold333G49013 Striga asiatica HOM05D005404 ORTHO05D006623 5.6e-32 141.4 143 62.2
TWI53G0717 Tripterygium wilfordii HOM05D005404 ORTHO05D006623 9.5e-32 140.6 142 62.7
Migut.H01386 Erythranthe guttata HOM05D005404 ORTHO05D006623 1.2e-31 140.2 143 63.6
Gohir.A10G038300 Gossypium hirsutum HOM05D005404 ORTHO05D006623 1.2e-31 140.2 142 62.7
Hma1.2p1_0015F.1_g010240 Hydrangea macrophylla HOM05D005404 ORTHO05D006623 1.2e-31 140.2 153 58.2
Potri.001G352600 Populus trichocarpa HOM05D005404 ORTHO05D006623 1.2e-31 140.2 142 62.7
HanXRQChr11g0340931 Helianthus annuus HOM05D005404 ORTHO05D006623 1.6e-31 139.8 142 62.7
FAN11G2394 Fragaria x ananassa HOM05D005404 ORTHO05D006623 2.1e-31 139.4 142 62.7
Nitab4.5_0000206g0130 Nicotiana tabacum HOM05D005404 ORTHO05D006623 3.6e-31 138.7 142 61.3
PGR042G3093 Punica granatum HOM05D005404 ORTHO05D006623 6.1e-31 137.9 142 62.0
Solyc02g071150.3 Solanum lycopersicum HOM05D005404 ORTHO05D006623 1.0e-30 137.1 142 60.6
Sopen02g020230 Solanum pennellii HOM05D005404 ORTHO05D006623 1.0e-30 137.1 142 60.6
DCAR_007905 Daucus carota HOM05D005404 ORTHO05D006623 1.4e-30 136.7 142 62.7
FAN21G0592 Fragaria x ananassa HOM05D005404 ORTHO05D006623 1.8e-30 136.3 142 61.3
Prupe.4G075200 Prunus persica HOM05D005404 ORTHO05D006623 1.8e-30 136.3 143 60.8
EL10Ac8g19776 Beta vulgaris HOM05D005404 ORTHO05D006623 2.3e-30 136.0 142 62.0
BcaB07g32570 Brassica carinata HOM05D005404 ORTHO05D006623 2.3e-30 136.0 141 59.6
BcaC01g00143 Brassica carinata HOM05D005404 ORTHO05D006623 2.3e-30 136.0 141 60.3
A08p24810 Brassica napus HOM05D003390 ORTHO05D004189 2.3e-30 136.0 141 60.3
Ciclev10017167m.g Citrus clementina HOM05D005404 ORTHO05D006623 2.3e-30 136.0 143 61.5
Glyma.05G127400 Glycine max HOM05D005404 ORTHO05D006623 2.3e-30 136.0 142 60.6
DCAR_003948 Daucus carota HOM05D005404 ORTHO05D006623 3.0e-30 135.6 142 62.7
Sp1g25740 Schrenkiella parvula HOM05D005404 ORTHO05D006623 3.0e-30 135.6 141 60.3
Hund21493 Selenicereus undatus HOM05D005404 ORTHO05D006623 3.0e-30 135.6 142 60.6
MBI07_g07833_MAGBIO Magnolia biondii HOM05D005404 ORTHO05D006623 4.0e-30 135.2 142 60.6
Thhalv10009098m.g Eutrema salsugineum HOM05D005404 ORTHO05D006623 5.2e-30 134.8 141 59.6
Glyma.08G082100 Glycine max HOM05D005404 ORTHO05D006623 5.2e-30 134.8 142 59.9
VMungo0251G2631 Vigna mungo HOM05D005404 ORTHO05D006623 5.2e-30 134.8 142 59.9
CDE08G1548 Ceratophyllum demersum HOM05D005404 ORTHO05D006623 6.8e-30 134.4 123 66.7
BcaB03g13855 Brassica carinata HOM05D005404 ORTHO05D006623 8.9e-30 134.0 141 59.6
CiPaw.09G128300 Carya illinoinensis HOM05D005404 ORTHO05D006623 8.9e-30 134.0 142 61.3
C05p28570 Brassica napus HOM05D005404 ORTHO05D006623 1.2e-29 133.7 141 58.9
Carub.0001s2809 Capsella rubella HOM05D005404 ORTHO05D006623 1.2e-29 133.7 141 61.7
Peaxi162Scf00482g00049 Petunia axillaris HOM05D005404 ORTHO05D006623 1.2e-29 133.7 142 59.9
THA.LOC104812663 Tarenaya hassleriana HOM05D005404 ORTHO05D006623 1.2e-29 133.7 141 61.0
Ca_18287_v3 Cicer arietinum L. HOM05D005404 ORTHO05D006623 1.5e-29 133.3 142 59.2
MD16G1202800 Malus domestica HOM05D005404 ORTHO05D006623 2.0e-29 132.9 143 60.1
BcaB03g12183 Brassica carinata HOM05D005404 ORTHO05D006623 4.4e-29 131.7 142 59.9
BcaC06g35468 Brassica carinata HOM05D005404 ORTHO05D006623 4.4e-29 131.7 141 58.2
Phvul.002G197500 Phaseolus vulgaris HOM05D005404 ORTHO05D006623 5.8e-29 131.3 142 58.5
Psat7g091480 Pisum sativum HOM05D005404 ORTHO05D006623 5.8e-29 131.3 142 58.5
MELO3C007159.2 Cucumis melo HOM05D005404 ORTHO05D006623 7.5e-29 131.0 142 59.2
CsaV3_6G051470 Cucumis sativus L. HOM05D005404 ORTHO05D006623 7.5e-29 131.0 142 59.2
Dinv32291 Davidia involucrata HOM05D005404 ORTHO05D006623 7.5e-29 131.0 142 61.3
CARHR029600 Cardamine hirsuta HOM05D005404 ORTHO05D006623 9.8e-29 130.6 141 58.2
MD05G1290500 Malus domestica HOM05D005404 ORTHO05D006623 9.8e-29 130.6 143 58.7
Os05g0547850 Oryza sativa ssp. japonica HOM05D005404 ORTHO05D006623 9.8e-29 130.6 142 57.7
Sed0003587 Sechium edule HOM05D005404 ORTHO05D006623 9.8e-29 130.6 142 59.2
Lsat_1_v5_gn_1_91580 Lactuca sativa HOM05D005404 ORTHO05D006623 1.3e-28 130.2 142 61.3
BcaC05g26997 Brassica carinata HOM05D005404 ORTHO05D006623 1.7e-28 129.8 141 58.9
BolC5t31581H Brassica oleracea HOM05D005404 ORTHO05D006623 1.7e-28 129.8 142 58.5
Medtr4g094580 Medicago truncatula HOM05D005404 ORTHO05D006623 2.2e-28 129.4 142 57.7
TAR627G1065 Trochodendron aralioides HOM05D005404 ORTHO05D006623 2.2e-28 129.4 132 62.9
MSTRG.14760 Avicennia marina HOM05D005404 ORTHO05D006623 2.9e-28 129.0 139 61.9
BolC7t42063H Brassica oleracea HOM05D005404 ORTHO05D006623 2.9e-28 129.0 138 58.0
BraA07t28813Z Brassica rapa HOM05D005404 ORTHO05D006623 2.9e-28 129.0 138 58.7
Sc05g0006520 Simmondsia chinensis HOM05D005404 ORTHO05D006623 3.7e-28 128.6 142 56.3
A07p10200 Brassica napus HOM05D005404 ORTHO05D006623 6.4e-28 127.9 133 59.4
Atru.chr10.1368 Acer truncatum HOM05D005404 ORTHO05D006623 1.1e-27 127.1 142 59.9
BolC3t19881H Brassica oleracea HOM05D005404 ORTHO05D006623 1.4e-27 126.7 133 60.9
BraA08t34436Z Brassica rapa HOM05D003390 ORTHO05D004189 3.2e-27 125.6 133 60.2
Lj4g0012372 Lotus japonicus HOM05D005404 ORTHO05D006623 3.2e-27 125.6 142 57.0
Lalb_Chr12g0208831 Lupinus albus HOM05D005404 ORTHO05D006623 3.2e-27 125.6 142 57.7
SalBow7G3345 Salvia bowleyana HOM05D005404 ORTHO05D006623 4.1e-27 125.2 143 59.4
ATR0681G149 Amborella trichopoda HOM05D005404 ORTHO05D006623 9.2e-27 124.0 131 60.3
Manes.17G066000 Manihot esculenta HOM05D005404 ORTHO05D006623 1.2e-26 123.6 142 57.7
ECA248G0679 Erigeron canadensis HOM05D005404 ORTHO05D006623 2.7e-26 122.5 110 68.2
Sabra16G0231900 Salix brachista HOM05D005404 ORTHO05D006623 2.7e-26 122.5 176 50.6
Nn3g20867 Nelumbo nucifera HOM05D005404 ORTHO05D006623 1.3e-25 120.2 143 58.0
Actinidia39556 Actinidia chinensis HOM05D005404 ORTHO05D006623 2.3e-25 119.4 142 57.0
Manes.15G118100 Manihot esculenta HOM05D005404 ORTHO05D006623 2.3e-25 119.4 142 57.0
Oeu046548.1 Olea europaea HOM05D005404 ORTHO05D006623 2.3e-25 119.4 143 58.0
AL1G43680 Arabidopsis lyrata HOM05D005404 ORTHO05D006623 5.0e-25 118.2 142 55.6
Oeu012458.1 Olea europaea HOM05D005404 ORTHO05D006623 5.0e-25 118.2 143 58.0
CDE02G1967 Ceratophyllum demersum HOM05D005404 ORTHO05D006623 8.6e-25 117.5 110 64.5
TWI09G1218 Tripterygium wilfordii HOM05D005404 ORTHO05D006623 5.6e-24 114.8 138 56.5
AUR62023445 Chenopodium quinoa HOM05D005404 ORTHO05D006623 7.3e-24 114.4 120 57.5
QL05p060078 Quercus lobata HOM05D005404 ORTHO05D006623 7.3e-24 114.4 142 54.9
Lj2A310T44 Lonicera japonica HOM05D005404 ORTHO05D006623 2.1e-23 112.8 142 55.6
FAN25G0636 Fragaria x ananassa HOM05D005404 ORTHO05D006623 2.8e-23 112.5 105 65.7
FAN25G2540 Fragaria x ananassa HOM05D005404 ORTHO05D006623 2.8e-23 112.5 105 65.7
RcHm_v2.0_Chr5g0013081 Rosa chinensis HOM05D005404 ORTHO05D006623 1.4e-22 110.2 105 63.8
Zm00001eb294640 Zea mays HOM05D005404 ORTHO05D006623 1.4e-22 110.2 122 55.7
FAN16G2304 Fragaria x ananassa HOM05D005404 ORTHO05D006623 3.1e-22 109.0 103 65.0
FvH4_3g06230 Fragaria vesca HOM05D005404 ORTHO05D006623 4.0e-22 108.6 142 54.2
PGSC0003DMG400003081 Solanum tuberosum HOM05D005404 ORTHO05D006623 1.2e-21 107.1 105 61.0
THA.LOC104814282 Tarenaya hassleriana HOM05D005404 ORTHO05D006623 2.6e-21 105.9 141 52.5
CAN.G257.34 Capsicum annuum HOM05D005404 ORTHO05D006623 4.4e-21 105.1 106 58.5
Cpa.g.sc17.100 Carica papaya HOM05D005404 ORTHO05D006623 4.4e-21 105.1 64 87.5
AUR62035781 Chenopodium quinoa HOM05D005404 ORTHO05D006623 5.8e-21 104.8 103 61.2
AUR62027578 Chenopodium quinoa HOM05D005404 ORTHO05D006623 7.5e-21 104.4 142 51.4
AT1G29850 Arabidopsis thaliana HOM05D005404 ORTHO05D006623 1.3e-20 103.6 141 51.8
arahy.Tifrunner.gnm1.ann1.JSLQ1D Arachis hypogaea HOM05D005404 ORTHO05D006623 1.7e-20 103.2 66 81.8
AagrBONN_evm.TU.Sc2ySwM_362.2923 Anthoceros agrestis HOM05D005404 ORTHO05D006623 6.4e-20 101.3 105 59.0
MD09G1183100 Malus domestica HOM05D005404 ORTHO05D006623 8.3e-20 100.9 105 61.0
Zm00001eb342640 Zea mays HOM05D005404 ORTHO05D006623 2.4e-19 99.4 103 59.2
Os05g0546500 Oryza sativa ssp. japonica HOM05D005404 ORTHO05D006623 9.2e-19 97.4 67 76.1
TAR636G3446 Trochodendron aralioides HOM05D005404 ORTHO05D006623 9.2e-19 97.4 101 61.4
Nitab4.5_0008782g0030 Nicotiana tabacum HOM05D005404 ORTHO05D006623 2.7e-18 95.9 142 50.0
Aa31LG6G5780 Aethionema arabicum HOM05D005404 ORTHO05D006623 1.3e-17 93.6 108 56.5
SEGI_04398 Sequoiadendron giganteum HOM05D005404 ORTHO05D006623 2.3e-17 92.8 66 75.8
Nitab4.5_0003527g0030 Nicotiana tabacum HOM05D005404 ORTHO05D006623 3.9e-17 92.0 58 84.5
Mapoly0080s0013 Marchantia polymorpha HOM05D005404 ORTHO05D006623 6.6e-17 91.3 67 76.1
Peaxi162Scf00121g02445 Petunia axillaris HOM05D005404 ORTHO05D006623 6.6e-17 91.3 120 53.3
SMO358G0232 Selaginella moellendorffii HOM05D005404 ORTHO05D006623 6.6e-17 91.3 67 73.1
Pp3c14_19320 Physcomitrium patens HOM05D005404 ORTHO05D006623 1.5e-16 90.1 104 52.9
Cre12.g557800 Chlamydomonas reinhardtii HOM05D005404 ORTHO05D006623 1.2e-13 80.5 126 42.9
HPP92_021557 Vanilla planifolia HOM05D005404 ORTHO05D006623 7.5e-13 77.8 52 78.8
C03p76250 Brassica napus HOM05D005404 ORTHO05D006623 2.9e-12 75.9 79 62.0
C07p15720 Brassica napus HOM05D005404 ORTHO05D006623 3.7e-12 75.5 116 46.6
CBR_g45965 Chara braunii HOM05D005404 ORTHO05D006623 6.4e-12 74.7 108 43.5
CSS0048314 Camellia sinensis var. sinensis HOM05D005404 ORTHO05D006623 1.9e-11 73.2 72 62.5
PRCOL_00005423 Prasinoderma coloniale HOM05D005404 ORTHO05D006623 2.1e-10 69.7 111 40.5
Nitab4.5_0010964g0060 Nicotiana tabacum HOM05D000728 ORTHO05D001474 3.0e-09 65.9 259 30.9
ClCG01G024320 Citrullus lanatus HOM05D005404 ORTHO05D006623 2.5e-08 62.8 94 47.9
arahy.Tifrunner.gnm1.ann1.HCY9BB Arachis hypogaea HOM05D005404 ORTHO05D006623 8.1e-07 57.8 51 66.7
Nn4g23354 Nelumbo nucifera HOM05D005404 ORTHO05D006623 1.8e-06 56.6 41 73.2


User provided reference genes

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