Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052201.2 Olea europaea HOM05D006931 ORTHO05D008782 1.7e-137 493.8 250 100.0
MSTRG.10694 Avicennia marina HOM05D006931 ORTHO05D008782 6.4e-73 279.3 227 63.0
Dinv26621 Davidia involucrata HOM05D006931 ORTHO05D008782 1.2e-66 258.5 232 59.1
Lj8P135T27 Lonicera japonica HOM05D006931 ORTHO05D008782 3.8e-65 253.4 229 59.0
Actinidia09786 Actinidia chinensis HOM05D006931 ORTHO05D008782 8.4e-65 252.3 205 62.0
Sopen07g024110 Solanum pennellii HOM05D006931 ORTHO05D008782 1.9e-64 251.1 229 57.2
Rhsim01G0212700 Rhododendron simsii HOM05D006931 ORTHO05D008782 1.2e-63 248.4 197 64.0
CSS0037608 Camellia sinensis var. sinensis HOM05D006931 ORTHO05D008782 2.1e-63 247.7 232 56.9
PGSC0003DMG400006142 Solanum tuberosum HOM05D006931 ORTHO05D008782 2.7e-63 247.3 229 55.9
CSS0032219 Camellia sinensis var. sinensis HOM05D006931 ORTHO05D008782 4.6e-63 246.5 232 56.5
Rhsim06G0175400 Rhododendron simsii HOM05D006931 ORTHO05D008782 6.0e-63 246.1 197 63.5
Solyc07g047620.3 Solanum lycopersicum HOM05D006931 ORTHO05D008782 1.0e-62 245.4 229 55.5
Cc05_g02580 Coffea canephora HOM05D006931 ORTHO05D008782 1.3e-62 245.0 203 61.1
QL04p061072 Quercus lobata HOM05D006931 ORTHO05D008782 2.5e-61 240.7 227 55.1
Hma1.2p1_0253F.1_g103010 Hydrangea macrophylla HOM05D006931 ORTHO05D008782 2.1e-60 237.7 225 55.6
Peaxi162Scf00802g00211 Petunia axillaris HOM05D006931 ORTHO05D008782 2.1e-60 237.7 231 54.5
Peaxi162Scf70695g00002 Petunia axillaris HOM05D006931 ORTHO05D008782 2.1e-60 237.7 231 54.5
CAN.G805.1 Capsicum annuum HOM05D006931 ORTHO05D008782 6.2e-60 236.1 203 59.6
Hma1.2p1_2484F.1_g323040 Hydrangea macrophylla HOM05D006931 ORTHO05D008782 8.1e-60 235.7 225 55.1
Migut.B01087 Erythranthe guttata HOM05D006931 ORTHO05D008782 2.4e-59 234.2 195 59.5
PGR142G3220 Punica granatum HOM05D006931 ORTHO05D008782 2.4e-59 234.2 230 51.7
CsaV3_6G009550 Cucumis sativus L. HOM05D006931 ORTHO05D008782 3.1e-59 233.8 229 54.6
Nitab4.5_0001774g0100 Nicotiana tabacum HOM05D006931 ORTHO05D008782 3.1e-59 233.8 226 54.0
RcHm_v2.0_Chr2g0156201 Rosa chinensis HOM05D006931 ORTHO05D008782 5.3e-59 233.0 197 60.4
vmacro12097 Vaccinium macrocarpon HOM05D006931 ORTHO05D008782 1.2e-58 231.9 197 60.9
MELO3C025970.2 Cucumis melo HOM05D006931 ORTHO05D008782 1.5e-58 231.5 229 53.3
AUR62017857 Chenopodium quinoa HOM05D006931 ORTHO05D008782 3.4e-58 230.3 210 53.8
FvH4_6g40750 Fragaria vesca HOM05D006931 ORTHO05D008782 3.4e-58 230.3 197 59.4
FAN05G5053 Fragaria x ananassa HOM05D006931 ORTHO05D008782 3.4e-58 230.3 199 57.8
FAN14G4269 Fragaria x ananassa HOM05D006931 ORTHO05D008782 3.4e-58 230.3 197 59.4
QL04p060976 Quercus lobata HOM05D006931 ORTHO05D008782 4.5e-58 229.9 195 59.0
Thecc.01G192500 Theobroma cacao HOM05D006931 ORTHO05D008782 4.5e-58 229.9 199 58.3
CANSAT64G0807 Cannabis sativa HOM05D006931 ORTHO05D008782 7.6e-58 229.2 225 54.2
MD17G1115600 Malus domestica HOM05D006931 ORTHO05D008782 7.6e-58 229.2 200 58.5
AUR62003544 Chenopodium quinoa HOM05D006931 ORTHO05D008782 2.2e-57 227.6 200 55.5
Haze_12642 Corylus avellana HOM05D006931 ORTHO05D008782 2.2e-57 227.6 220 52.7
FAN02G4040 Fragaria x ananassa HOM05D006931 ORTHO05D008782 2.2e-57 227.6 198 59.1
Cfa014231 Carpinus fangiana HOM05D006931 ORTHO05D008782 4.9e-57 226.5 219 52.1
Prupe.3G199000 Prunus persica HOM05D006931 ORTHO05D008782 8.4e-57 225.7 197 58.4
Ah.10g034380 Amaranthus hybridus HOM05D006931 ORTHO05D008782 1.1e-56 225.3 212 51.4
ClCG02G009270 Citrullus lanatus HOM05D006931 ORTHO05D008782 1.4e-56 224.9 228 53.9
DCAR_019687 Daucus carota HOM05D006931 ORTHO05D008782 5.5e-56 223.0 227 50.7
C01p22740 Brassica napus HOM05D003050 ORTHO05D003513 2.1e-55 221.1 228 52.2
BraA01t01749Z Brassica rapa HOM05D003050 ORTHO05D003513 3.5e-55 220.3 200 56.0
EL10Ac6g15337 Beta vulgaris HOM05D006931 ORTHO05D008782 4.6e-55 219.9 213 51.2
Manes.06G016000 Manihot esculenta HOM05D006931 ORTHO05D008782 4.6e-55 219.9 229 52.4
Nn3g20375 Nelumbo nucifera HOM05D006931 ORTHO05D008782 4.6e-55 219.9 212 55.7
Ciclev10018243m.g Citrus clementina HOM05D006931 ORTHO05D008782 6.0e-55 219.5 237 48.5
Gorai.012G149400 Gossypium raimondii HOM05D006931 ORTHO05D008782 6.0e-55 219.5 204 53.9
Gohir.A04G119800 Gossypium hirsutum HOM05D006931 ORTHO05D008782 7.9e-55 219.2 201 54.7
BcaC09g50628 Brassica carinata HOM05D006931 ORTHO05D008782 1.0e-54 218.8 228 51.8
A01p17940 Brassica napus HOM05D003050 ORTHO05D003513 1.3e-54 218.4 226 50.9
CARHR234290 Cardamine hirsuta HOM05D006931 ORTHO05D008782 1.3e-54 218.4 205 54.1
TAR629G3292 Trochodendron aralioides HOM05D006931 ORTHO05D008782 1.8e-54 218.0 231 53.2
BolC1t02203H Brassica oleracea HOM05D003050 ORTHO05D003513 2.3e-54 217.6 214 52.8
Gohir.D04G161400 Gossypium hirsutum HOM05D006931 ORTHO05D008782 2.3e-54 217.6 204 53.4
Hund04386 Selenicereus undatus HOM05D006931 ORTHO05D008782 5.1e-54 216.5 213 52.6
SGA_v2.0_scaffold347G49544 Striga asiatica HOM05D006931 ORTHO05D008782 6.7e-54 216.1 203 56.7
Potri.014G166001 Populus trichocarpa HOM05D006931 ORTHO05D008782 1.1e-53 215.3 215 53.5
Hund23024 Selenicereus undatus HOM05D006931 ORTHO05D008782 1.1e-53 215.3 213 52.1
BcaC09g52253 Brassica carinata HOM05D006931 ORTHO05D008782 1.9e-53 214.5 227 49.3
SalBow1G4479 Salvia bowleyana HOM05D006931 ORTHO05D008782 1.9e-53 214.5 188 55.9
AUR62015178 Chenopodium quinoa HOM05D006931 ORTHO05D008782 2.5e-53 214.2 209 52.2
MBI19_g25580_MAGBIO Magnolia biondii HOM05D006931 ORTHO05D008782 2.5e-53 214.2 215 53.0
Aqoxy4G02238_Aqoxy4G02239 Aquilegia oxysepala HOM05D006931 ORTHO05D008782 3.3e-53 213.8 225 52.4
Sp7g24650 Schrenkiella parvula HOM05D006931 ORTHO05D008782 5.6e-53 213.0 202 53.5
Duzib133G1060 Durio zibethinus HOM05D006931 ORTHO05D008782 7.4e-53 212.6 199 54.8
Thhalv10024897m.g Eutrema salsugineum HOM05D006931 ORTHO05D008782 7.4e-53 212.6 200 54.0
Sc07g0001940 Simmondsia chinensis HOM05D006931 ORTHO05D008782 7.4e-53 212.6 207 48.8
Cpa.g.sc211.20 Carica papaya HOM05D006931 ORTHO05D008782 9.6e-53 212.2 228 50.9
Sed0019973 Sechium edule HOM05D006931 ORTHO05D008782 2.1e-52 211.1 230 50.9
Lsat_1_v5_gn_2_33981 Lactuca sativa HOM05D001522 ORTHO05D008782 2.8e-52 210.7 203 52.2
Carub.0007s1417 Capsella rubella HOM05D006931 ORTHO05D008782 3.7e-52 210.3 207 51.7
AT4G26680 Arabidopsis thaliana HOM05D006931 ORTHO05D008782 4.8e-52 209.9 209 50.7
Sabra14G0126400 Salix brachista HOM05D006931 ORTHO05D008782 4.8e-52 209.9 213 53.1
CiPaw.03G280700 Carya illinoinensis HOM05D006931 ORTHO05D008782 1.4e-51 208.4 203 54.2
Eucgr.G01771 Eucalyptus grandis HOM05D006931 ORTHO05D008782 2.4e-51 207.6 193 52.3
Aa31LG5G12250 Aethionema arabicum HOM05D006931 ORTHO05D008782 5.3e-51 206.5 200 53.5
THA.LOC104808862 Tarenaya hassleriana HOM05D006931 ORTHO05D008782 1.2e-50 205.3 255 45.1
Atru.chr6.3406 Acer truncatum HOM05D006931 ORTHO05D008782 2.2e-49 201.1 203 50.7
HanXRQChr17g0537601 Helianthus annuus HOM05D006931 ORTHO05D008782 2.2e-49 201.1 235 46.8
HanXRQChr04g0126531 Helianthus annuus HOM05D006931 ORTHO05D008782 1.9e-48 198.0 197 50.3
SHI10148 Sapria himalayana HOM05D006931 ORTHO05D008782 4.2e-48 196.8 205 51.2
AL7G26160 Arabidopsis lyrata HOM05D006931 ORTHO05D008782 1.2e-47 195.3 197 50.3
MBI19_g25579_MAGBIO Magnolia biondii HOM05D006931 ORTHO05D008782 1.8e-46 191.4 205 51.2
Medtr7g090340 Medicago truncatula HOM05D006931 ORTHO05D008782 6.7e-46 189.5 192 49.5
ATR1159G005 Amborella trichopoda HOM05D006931 ORTHO05D008782 1.9e-45 188.0 190 48.9
Psat4g195880 Pisum sativum HOM05D006931 ORTHO05D008782 1.3e-44 185.3 192 47.4
TPR.G8749 Trifolium pratense HOM05D006931 ORTHO05D008782 6.3e-44 183.0 193 47.7
HPP92_013549 Vanilla planifolia HOM05D006931 ORTHO05D008782 1.5e-42 178.3 196 49.5
Cfa014232 Carpinus fangiana HOM05D006931 ORTHO05D008782 1.7e-41 174.9 193 46.6
Lj3g0013378 Lotus japonicus HOM05D006931 ORTHO05D008782 1.9e-40 171.4 185 50.3
Lj3g0024796 Lotus japonicus HOM05D006931 ORTHO05D008782 1.9e-40 171.4 185 50.3
VMungo0331G0870 Vigna mungo HOM05D006931 ORTHO05D008782 4.6e-39 166.8 197 44.7
Phvul.010G143400 Phaseolus vulgaris HOM05D006931 ORTHO05D008782 3.0e-38 164.1 194 44.3
RcHm_v2.0_Chr4g0385191 Rosa chinensis HOM05D006931 ORTHO05D008782 5.1e-38 163.3 128 61.7
Rhsim01G0200100 Rhododendron simsii HOM05D006931 ORTHO05D008782 1.1e-37 162.2 172 51.7
Glyma.08G199100 Glycine max HOM05D006931 ORTHO05D008782 3.3e-37 160.6 221 40.7
SEGI_12196 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 1.5e-34 151.8 197 38.6
Lsat_1_v5_gn_8_36881 Lactuca sativa HOM05D006040 ORTHO05D007134 3.2e-32 144.1 162 48.1
Atru.chr1.3930 Acer truncatum HOM05D006931 ORTHO05D008782 2.6e-29 134.4 97 60.8
Lalb_Chr03g0043751 Lupinus albus HOM05D006931 ORTHO05D008782 1.3e-28 132.1 171 42.7
Atru.chr6.3410 Acer truncatum HOM05D000074 ORTHO05D008782 4.4e-21 107.1 118 51.7
Nitab4.5_0001701g0020 Nicotiana tabacum HOM05D006931 ORTHO05D008782 1.8e-14 85.1 71 59.2
CSS0005617 Camellia sinensis var. sinensis HOM05D006931 ORTHO05D008782 2.0e-13 81.6 49 77.6
Atru.chr1.3931 Acer truncatum HOM05D006931 ORTHO05D008782 2.2e-12 78.2 50 72.0
Cfa014237 Carpinus fangiana HOM05D006931 ORTHO05D008782 3.7e-12 77.4 49 69.4
RcHm_v2.0_Chr4g0385181 Rosa chinensis HOM05D006931 ORTHO05D008782 3.5e-10 70.9 42 73.8
Gohir.A07G164200 Gossypium hirsutum HOM05D006931 ORTHO05D008782 7.7e-10 69.7 50 64.0
Manes.05G013300 Manihot esculenta HOM05D006931 ORTHO05D015207 1.7e-09 68.6 45 73.3
Zm00001eb027640 Zea mays HOM05D006931 ORTHO05D008782 2.2e-09 68.2 202 29.2
SEGI_16669 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 8.5e-09 66.2 244 24.6
Dinv21282 Davidia involucrata HOM05D006931 ORTHO05D028388 2.5e-08 64.7 38 84.2
Ciclev10030406m.g Citrus clementina HOM05D007083 ORTHO05D008801 4.7e-07 60.5 206 27.2
ATR0317G062 Amborella trichopoda HOM05D007496 ORTHO05D009479 3.0e-06 57.8 162 24.1
CSS0008892 Camellia sinensis var. sinensis HOM05D007083 ORTHO05D008801 5.2e-06 57.0 221 24.4
CSS0024065 Camellia sinensis var. sinensis HOM05D007083 ORTHO05D008801 5.2e-06 57.0 221 24.4
Cfa014238 Carpinus fangiana HOM05D006931 ORTHO05D008782 6.8e-06 56.6 73 42.5
SEGI_21536 Sequoiadendron giganteum HOM05D007639 ORTHO05D009509 6.8e-06 56.6 161 27.3


User provided reference genes

Program Settings