Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 1.2e-233 812.8 396 100.0
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 7.8e-177 624.0 342 86.3
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 2.3e-176 622.5 341 86.5
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 2.5e-175 619.0 349 83.7
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 4.3e-175 618.2 344 84.6
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 9.6e-175 617.1 339 86.1
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 9.6e-175 617.1 344 83.7
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 1.2e-174 616.7 343 85.4
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 1.2e-174 616.7 349 83.4
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 4.7e-174 614.8 341 84.8
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 6.2e-174 614.4 337 86.1
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 1.1e-173 613.6 342 83.9
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 1.4e-173 613.2 339 84.4
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 1.4e-173 613.2 350 82.3
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 1.4e-173 613.2 341 85.6
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 1.8e-173 612.8 343 83.1
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 2.4e-173 612.5 342 83.6
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 3.1e-173 612.1 342 85.1
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 4.0e-173 611.7 341 83.9
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 9.0e-173 610.5 343 83.1
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.2e-172 610.1 343 84.5
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 1.5e-172 609.8 349 82.5
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 2.6e-172 609.0 346 84.4
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 2.6e-172 609.0 341 83.0
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 5.8e-172 607.8 346 82.4
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 7.6e-172 607.4 347 82.4
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 9.9e-172 607.1 341 84.5
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 1.3e-171 606.7 345 80.9
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 1.7e-171 606.3 349 82.5
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 2.2e-171 605.9 341 82.4
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 2.2e-171 605.9 347 81.8
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 2.9e-171 605.5 341 82.7
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 2.9e-171 605.5 341 82.7
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 4.9e-171 604.7 343 82.5
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 4.9e-171 604.7 345 81.2
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 6.4e-171 604.4 344 81.1
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 8.4e-171 604.0 342 82.5
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 8.4e-171 604.0 349 81.7
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.1e-170 603.6 343 82.5
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 1.1e-170 603.6 341 83.0
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 1.9e-170 602.8 345 82.6
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 2.4e-170 602.4 342 81.3
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 4.2e-170 601.7 349 82.5
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 4.2e-170 601.7 346 80.9
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 1.6e-169 599.7 345 80.9
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 2.1e-169 599.4 340 82.6
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 2.1e-169 599.4 340 83.8
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 2.7e-169 599.0 344 80.8
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 2.7e-169 599.0 349 79.9
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 4.6e-169 598.2 341 82.7
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 6.0e-169 597.8 342 80.7
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 6.0e-169 597.8 341 82.4
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 6.0e-169 597.8 341 80.9
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 1.0e-168 597.0 340 82.4
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 1.3e-168 596.7 345 82.3
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 2.3e-168 595.9 341 81.2
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 2.3e-168 595.9 355 80.3
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 3.0e-168 595.5 339 82.0
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 3.0e-168 595.5 354 79.9
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 3.9e-168 595.1 345 81.2
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 3.9e-168 595.1 341 81.2
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 5.1e-168 594.7 367 78.2
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 5.1e-168 594.7 363 78.2
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 8.7e-168 594.0 343 80.8
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 1.5e-167 593.2 349 78.8
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 1.9e-167 592.8 341 81.5
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 3.3e-167 592.0 340 82.1
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 3.3e-167 592.0 340 82.1
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 4.3e-167 591.7 340 81.2
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 4.3e-167 591.7 339 82.6
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 5.6e-167 591.3 355 77.5
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 5.6e-167 591.3 344 80.5
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 1.6e-166 589.7 346 79.5
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 2.8e-166 589.0 350 78.6
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 3.6e-166 588.6 340 82.1
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 4.8e-166 588.2 350 78.6
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 4.8e-166 588.2 355 78.6
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 6.2e-166 587.8 347 80.1
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 6.2e-166 587.8 353 78.8
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 6.2e-166 587.8 342 79.2
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 8.1e-166 587.4 346 78.9
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.8e-165 586.3 341 80.4
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 2.4e-165 585.9 343 80.8
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 4.0e-165 585.1 346 79.2
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 4.0e-165 585.1 343 78.1
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 6.9e-165 584.3 339 79.4
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 9.0e-165 583.9 341 79.5
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 4.5e-164 581.6 341 80.1
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 1.7e-163 579.7 360 76.9
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 3.8e-163 578.6 346 79.8
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 8.4e-163 577.4 365 75.9
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 3.2e-162 575.5 342 79.8
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 3.2e-162 575.5 359 75.5
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 5.4e-162 574.7 342 78.7
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 4.6e-161 571.6 347 77.8
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 1.0e-160 570.5 329 81.8
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 5.1e-160 568.2 336 80.1
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.5e-159 566.6 351 76.4
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 3.3e-159 565.5 345 77.4
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 1.6e-158 563.1 343 77.8
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 1.4e-157 560.1 344 77.3
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 1.5e-156 556.6 343 75.8
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 4.5e-156 555.1 350 75.1
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 8.4e-155 550.8 352 75.9
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 5.5e-154 548.1 359 72.7
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 2.7e-153 545.8 347 74.9
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.8e-152 543.1 339 74.9
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 2.3e-152 542.7 341 77.4
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 1.5e-151 540.0 341 75.7
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 7.4e-151 537.7 345 74.8
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.4e-149 533.5 332 73.8
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.8e-149 533.1 339 72.9
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 4.0e-149 531.9 344 71.5
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 3.4e-148 528.9 340 72.4
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.1e-146 523.9 336 71.7
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 1.4e-146 523.5 300 82.0
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 1.9e-146 523.1 346 70.5
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.5e-146 522.7 349 73.6
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 2.5e-146 522.7 352 71.0
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 9.3e-146 520.8 339 73.5
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.6e-145 520.0 341 73.3
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 6.0e-145 518.1 409 64.5
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 8.7e-144 514.2 339 72.6
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 8.2e-142 507.7 339 71.4
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 3.4e-140 502.3 280 84.3
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.0e-139 500.7 291 80.8
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 3.8e-139 498.8 347 70.0
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.4e-138 496.9 370 64.3
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 1.5e-132 476.9 333 67.0
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 3.8e-131 472.2 331 67.4
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 8.5e-131 471.1 342 67.5
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 1.5e-127 460.3 248 87.5
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 8.2e-126 454.5 696 40.8
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 8.5e-123 444.5 335 60.3
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 1.1e-122 444.1 339 65.8
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 3.2e-122 442.6 311 65.9
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 5.3e-109 398.7 357 54.9
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 6.1e-105 385.2 248 71.4
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 2.6e-103 379.8 221 78.3
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 6.6e-99 365.2 319 57.7
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 5.7e-95 352.1 336 54.5
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 2.2e-94 350.1 204 81.9
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 2.7e-92 343.2 241 66.8
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 3.3e-82 309.7 203 74.9
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 3.1e-80 303.1 290 55.9
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 4.9e-54 216.1 132 84.1
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 1.9e-53 214.2 132 84.1
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 1.9e-53 214.2 132 83.3
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 7.8e-52 208.8 131 77.1
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 3.6e-49 199.9 132 81.1
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 2.2e-46 190.7 124 76.6
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 7.9e-44 182.2 101 88.1
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.9e-42 177.6 171 52.0
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 3.7e-41 173.3 99 84.8
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.8e-38 163.3 99 77.8
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 1.0e-35 155.2 95 76.8
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 4.5e-31 139.8 89 73.0
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 1.9e-29 134.4 69 92.8
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 5.5e-29 132.9 124 58.9
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 5.5e-29 132.9 108 61.1
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 1.9e-26 124.4 78 78.2
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 2.6e-23 114.0 68 79.4
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 5.9e-23 112.8 68 75.0
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 4.8e-17 93.2 84 56.0
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.9e-13 81.3 127 43.3
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 2.3e-11 74.3 47 68.1
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.3e-11 74.3 47 72.3
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 1.5e-10 71.6 46 65.2
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 9.1e-08 62.4 47 61.7
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 3.5e-07 60.5 41 68.3
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 2.9e-06 57.4 52 55.8


User provided reference genes

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