Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 3.9e-279 964.1 486 100.0
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 8.4e-189 664.1 457 70.9
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 1.0e-186 657.1 458 71.8
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 6.4e-181 637.9 450 70.4
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 6.9e-175 617.8 433 69.5
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 5.8e-174 614.8 445 69.0
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 5.5e-172 608.2 424 69.3
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 7.1e-172 607.8 424 69.6
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 2.7e-171 605.9 483 63.8
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 7.9e-171 604.4 417 70.5
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 1.8e-170 603.2 422 71.6
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 1.1e-169 600.5 424 69.3
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 9.6e-169 597.4 465 65.8
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 1.6e-168 596.7 434 67.7
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 7.6e-166 587.8 446 65.9
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 5.5e-164 581.6 489 62.0
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 7.9e-163 577.8 443 65.9
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 8.7e-162 574.3 402 69.4
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 7.4e-161 571.2 454 62.1
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 8.2e-160 567.8 469 62.5
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 2.6e-158 562.8 418 65.8
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 2.2e-157 559.7 465 61.1
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 6.5e-157 558.1 450 62.7
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 8.5e-157 557.8 483 59.0
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 1.9e-156 556.6 445 61.3
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 4.2e-156 555.4 417 65.9
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 9.3e-156 554.3 436 62.6
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 6.7e-154 548.1 434 63.8
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 8.7e-154 547.7 435 61.8
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 8.7e-154 547.7 446 61.0
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 1.5e-153 547.0 417 62.1
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 9.7e-153 544.3 442 61.5
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 2.2e-152 543.1 502 56.8
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 3.7e-152 542.3 436 61.9
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 4.8e-152 542.0 436 61.9
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 1.8e-151 540.0 424 61.6
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 4.1e-151 538.9 437 59.7
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 6.9e-151 538.1 437 59.0
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 9.1e-151 537.7 421 61.8
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 1.2e-150 537.3 424 61.3
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.5e-150 537.0 437 59.0
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 3.4e-150 535.8 447 60.2
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 4.5e-150 535.4 418 62.0
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 6.5e-149 531.6 418 61.5
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 1.4e-148 530.4 431 60.1
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 1.4e-148 530.4 424 62.7
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 4.2e-148 528.9 457 57.8
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 7.2e-148 528.1 416 60.6
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 9.4e-148 527.7 438 59.4
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 1.2e-147 527.3 446 58.7
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 1.6e-147 526.9 485 56.5
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 2.1e-147 526.6 466 57.5
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 2.7e-147 526.2 462 59.1
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 3.6e-147 525.8 442 59.3
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 6.1e-147 525.0 454 58.6
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 1.0e-146 524.2 447 58.6
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 1.0e-146 524.2 450 57.1
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.0e-146 524.2 485 56.3
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 5.1e-146 521.9 424 62.0
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 8.8e-146 521.2 436 60.3
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 3.3e-145 519.2 482 55.4
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 9.7e-145 517.7 425 61.6
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 2.8e-144 516.2 418 59.8
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 8.2e-144 514.6 392 64.5
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.4e-143 513.8 446 59.2
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 5.3e-143 511.9 465 55.9
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 2.0e-142 510.0 465 55.7
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 2.9e-141 506.1 449 57.0
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 5.0e-141 505.4 416 59.4
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 8.5e-141 504.6 422 59.2
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 1.1e-140 504.2 444 55.9
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.5e-140 503.1 469 52.9
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 2.5e-140 503.1 414 60.6
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 7.2e-140 501.5 417 57.3
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 9.4e-140 501.1 475 56.8
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 9.4e-140 501.1 481 54.3
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 1.6e-139 500.4 483 54.5
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 5.2e-138 495.4 442 54.1
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 2.0e-137 493.4 422 59.2
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 4.8e-136 488.8 433 58.4
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 6.3e-136 488.4 419 56.6
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 4.1e-135 485.7 418 61.2
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 3.6e-131 472.6 395 58.5
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 4.0e-130 469.2 364 61.8
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 5.2e-130 468.8 404 59.2
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 6.7e-130 468.4 393 59.5
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 2.6e-129 466.5 370 59.7
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 2.2e-128 463.4 421 53.0
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 3.7e-128 462.6 415 55.4
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 3.1e-127 459.5 454 51.1
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 1.1e-124 451.1 459 51.6
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 9.8e-121 438.0 365 57.0
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 7.7e-118 428.3 365 57.3
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 7.5e-113 411.8 358 60.6
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.8e-109 399.4 468 45.9
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.8e-103 380.6 284 68.0
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 3.3e-100 369.8 429 43.8
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 1.1e-98 364.8 470 43.0
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.5e-97 360.9 420 47.4
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 9.8e-97 358.2 419 45.8
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 7.5e-89 332.0 401 45.4
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 4.6e-86 322.8 222 68.5
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 1.3e-85 321.2 412 41.3
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 4.1e-79 299.7 363 45.7
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.6e-78 297.7 297 49.5
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 1.1e-74 285.0 264 57.2
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 2.1e-70 270.8 260 55.8
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 5.8e-65 252.7 208 60.1
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 6.9e-50 202.6 220 49.1
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 3.5e-46 190.3 442 31.9
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 8.7e-45 185.7 456 32.0
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 3.0e-37 160.6 126 59.5
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 6.7e-37 159.5 145 59.3
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 2.6e-33 147.5 117 64.1
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 7.7e-33 146.0 105 63.8
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 4.7e-30 136.7 105 61.9
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 3.9e-29 133.7 116 55.2
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.8e-26 124.8 413 25.9
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 8.0e-22 109.4 87 59.8
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 2.3e-21 107.8 90 61.1
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 2.2e-16 91.3 83 49.4
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 4.0e-13 80.5 69 59.4
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 2.0e-12 78.2 76 57.9
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 2.7e-09 67.8 76 50.0
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.2e-08 64.7 51 52.9
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 1.2e-06 58.9 42 69.0


User provided reference genes

Program Settings