Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051389.1 Olea europaea HOM05D003673 ORTHO05D004764 2.0e-253 878.6 443 100.0
Nitab4.5_0000006g0440 Nicotiana tabacum HOM05D003673 ORTHO05D004764 3.4e-197 691.8 451 76.9
Nitab4.5_0002201g0040 Nicotiana tabacum HOM05D003673 ORTHO05D004764 1.3e-196 689.9 451 76.5
PGSC0003DMG400017707 Solanum tuberosum HOM05D003673 ORTHO05D004764 6.4e-196 687.6 447 77.6
MSTRG.14903 Avicennia marina HOM05D003673 ORTHO05D004764 8.4e-196 687.2 446 75.3
Peaxi162Scf00416g00004 Petunia axillaris HOM05D003673 ORTHO05D004764 2.7e-194 682.2 445 77.5
Sopen05g024810 Solanum pennellii HOM05D003673 ORTHO05D004764 3.5e-194 681.8 443 77.7
CAN.G7.15 Capsicum annuum HOM05D003673 ORTHO05D004764 1.3e-193 679.9 445 75.7
Migut.M00071 Erythranthe guttata HOM05D003673 ORTHO05D004764 1.1e-192 676.8 424 76.9
SGA_v2.0_scaffold73G24479 Striga asiatica HOM05D003673 ORTHO05D004764 6.9e-190 667.5 425 76.7
Sopen07g023610 Solanum pennellii HOM05D003673 ORTHO05D004764 1.7e-188 662.9 428 76.9
PGSC0003DMG400017420 Solanum tuberosum HOM05D003673 ORTHO05D004764 1.9e-187 659.4 427 76.3
Solyc07g045050.3 Solanum lycopersicum HOM05D003673 ORTHO05D004764 4.2e-187 658.3 428 76.2
DCAR_023045 Daucus carota HOM05D003673 ORTHO05D004764 3.5e-186 655.2 437 75.5
PGR042G2748 Punica granatum HOM05D003673 ORTHO05D004764 4.6e-186 654.8 445 75.1
Sc19g0001760 Simmondsia chinensis HOM05D003673 ORTHO05D004764 1.0e-185 653.7 448 73.0
arahy.Tifrunner.gnm1.ann1.I7WXBP Arachis hypogaea HOM05D003673 ORTHO05D004764 1.1e-184 650.2 435 75.2
EL10Ac9g22832 Beta vulgaris HOM05D003673 ORTHO05D004764 1.1e-184 650.2 425 74.4
HanXRQChr14g0451901 Helianthus annuus HOM05D003673 ORTHO05D004764 1.1e-184 650.2 432 73.6
arahy.Tifrunner.gnm1.ann1.FDUH0H Arachis hypogaea HOM05D003673 ORTHO05D004764 1.9e-184 649.4 435 75.2
ClCG11G016540 Citrullus lanatus HOM05D003673 ORTHO05D004764 1.9e-184 649.4 451 73.8
Cfa023358 Carpinus fangiana HOM05D003673 ORTHO05D004764 2.5e-184 649.0 438 74.7
Haze_13556 Corylus avellana HOM05D003673 ORTHO05D004764 5.7e-184 647.9 438 74.2
LjContig00049g0013493 Lotus japonicus HOM05D003673 ORTHO05D004764 5.7e-184 647.9 439 74.3
Ah.01g013590 Amaranthus hybridus HOM05D003673 ORTHO05D004764 2.2e-183 646.0 427 73.5
QL08p044989 Quercus lobata HOM05D003673 ORTHO05D004764 3.7e-183 645.2 433 75.1
CiPaw.03G191900 Carya illinoinensis HOM05D003673 ORTHO05D004764 8.2e-183 644.0 439 73.3
FAN14G2563 Fragaria x ananassa HOM05D003673 ORTHO05D004764 1.8e-182 642.9 433 74.6
Ciclev10031587m.g Citrus clementina HOM05D003673 ORTHO05D004764 2.4e-182 642.5 429 75.5
FvH4_6g38670 Fragaria vesca HOM05D003673 ORTHO05D004764 3.1e-182 642.1 433 74.6
Hund22282 Selenicereus undatus HOM05D003673 ORTHO05D004764 3.1e-182 642.1 451 71.6
ECA238G4715 Erigeron canadensis HOM05D003673 ORTHO05D004764 4.1e-182 641.7 433 72.5
Dinv07706 Davidia involucrata HOM05D003673 ORTHO05D004764 5.3e-182 641.3 453 72.8
AUR62017589 Chenopodium quinoa HOM05D003673 ORTHO05D004764 4.5e-181 638.3 452 69.2
FAN02G0649 Fragaria x ananassa HOM05D003673 ORTHO05D004764 4.5e-181 638.3 436 73.9
Sabra02G0046800 Salix brachista HOM05D003673 ORTHO05D004764 1.0e-180 637.1 452 73.0
vmacro04781 Vaccinium macrocarpon HOM05D003673 ORTHO05D004764 1.3e-180 636.7 448 71.9
Ca_06264_v3 Cicer arietinum L. HOM05D003673 ORTHO05D004764 1.7e-180 636.3 431 73.8
Ca_30265_v3 Cicer arietinum L. HOM05D003673 ORTHO05D004764 1.7e-180 636.3 431 73.8
MELO3C022961.2 Cucumis melo HOM05D003673 ORTHO05D004764 1.7e-180 636.3 451 71.4
COL.COLO4_38400 Corchorus olitorius HOM05D003673 ORTHO05D004764 2.2e-180 636.0 431 74.2
Manes.02G088900 Manihot esculenta HOM05D003673 ORTHO05D004764 2.2e-180 636.0 441 73.0
Lalb_Chr04g0248921 Lupinus albus HOM05D003673 ORTHO05D004764 6.5e-180 634.4 433 71.8
Thecc.01G168600 Theobroma cacao HOM05D003673 ORTHO05D004764 6.5e-180 634.4 437 73.7
TWI59G0698 Tripterygium wilfordii HOM05D003673 ORTHO05D004764 6.5e-180 634.4 435 74.3
Eucgr.A02022 Eucalyptus grandis HOM05D003673 ORTHO05D004764 8.5e-180 634.0 442 72.9
Medtr5g091060 Medicago truncatula HOM05D003673 ORTHO05D004764 1.1e-179 633.6 424 75.0
FAN09G3261 Fragaria x ananassa HOM05D003673 ORTHO05D004764 1.4e-179 633.3 436 73.2
AUR62015128 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.9e-179 632.9 436 70.4
TPR.G10168 Trifolium pratense HOM05D003673 ORTHO05D004764 1.9e-179 632.9 430 73.7
Cpa.g.sc50.111 Carica papaya HOM05D003673 ORTHO05D004764 2.5e-179 632.5 436 72.7
CsaV3_4G032000 Cucumis sativus L. HOM05D003673 ORTHO05D004764 2.5e-179 632.5 457 70.9
Potri.002G057400 Populus trichocarpa HOM05D003673 ORTHO05D004764 4.2e-179 631.7 452 72.1
FAN05G2105 Fragaria x ananassa HOM05D003673 ORTHO05D004764 1.2e-178 630.2 435 72.9
SalBow1G2057 Salvia bowleyana HOM05D003673 ORTHO05D004764 1.2e-178 630.2 438 72.4
Sed0005423 Sechium edule HOM05D003673 ORTHO05D004764 1.2e-178 630.2 442 72.9
CSS0042622 Camellia sinensis var. sinensis HOM05D003673 ORTHO05D004764 4.6e-178 628.2 437 72.1
Carub.0001s0594 Capsella rubella HOM05D003673 ORTHO05D004764 4.6e-178 628.2 429 73.0
Rhsim07G0197900 Rhododendron simsii HOM05D003673 ORTHO05D004764 4.6e-178 628.2 446 70.6
Gohir.A07G080400 Gossypium hirsutum HOM05D003673 ORTHO05D004764 1.0e-177 627.1 432 73.1
Gorai.001G092000 Gossypium raimondii HOM05D003673 ORTHO05D004764 1.4e-177 626.7 432 72.9
C05p04810 Brassica napus HOM05D003673 ORTHO05D004764 1.8e-177 626.3 431 72.9
BolC5t29254H Brassica oleracea HOM05D003673 ORTHO05D004764 3.0e-177 625.5 431 73.1
Gohir.D07G086000 Gossypium hirsutum HOM05D003673 ORTHO05D004764 3.0e-177 625.5 432 72.9
Prupe.3G177700 Prunus persica HOM05D003673 ORTHO05D004764 3.0e-177 625.5 435 72.2
Sp1g05330 Schrenkiella parvula HOM05D003673 ORTHO05D004764 6.7e-177 624.4 430 73.3
TAR626G0427 Trochodendron aralioides HOM05D003673 ORTHO05D004764 1.1e-176 623.6 434 72.4
A10p05210 Brassica napus HOM05D003673 ORTHO05D004764 2.0e-176 622.9 428 73.1
BcaNung07075 Brassica carinata HOM05D003673 ORTHO05D004764 2.5e-176 622.5 431 72.9
A09p66930 Brassica napus HOM05D003673 ORTHO05D004764 2.5e-176 622.5 428 73.4
BcaC07g42060 Brassica carinata HOM05D003673 ORTHO05D004764 5.7e-176 621.3 426 72.8
RcHm_v2.0_Chr2g0152131 Rosa chinensis HOM05D003673 ORTHO05D004764 7.4e-176 620.9 431 72.6
THA.LOC104815838 Tarenaya hassleriana HOM05D003673 ORTHO05D004764 7.4e-176 620.9 438 71.2
Glyma.14G030400 Glycine max HOM05D003673 ORTHO05D004764 9.7e-176 620.5 427 71.9
Aa31LG1G7910 Aethionema arabicum HOM05D003673 ORTHO05D004764 1.7e-175 619.8 430 71.6
C08p51160 Brassica napus HOM05D003673 ORTHO05D004764 2.2e-175 619.4 428 72.7
BolC8t52642H Brassica oleracea HOM05D003673 ORTHO05D004764 2.2e-175 619.4 428 72.7
BraA10t42788Z Brassica rapa HOM05D003673 ORTHO05D004764 2.2e-175 619.4 431 72.2
Thhalv10007634m.g Eutrema salsugineum HOM05D003673 ORTHO05D004764 2.2e-175 619.4 431 72.4
AL1G16600 Arabidopsis lyrata HOM05D003673 ORTHO05D004764 2.8e-175 619.0 429 72.0
CANSAT64G2396 Cannabis sativa HOM05D003673 ORTHO05D004764 3.7e-175 618.6 431 72.9
CANSAT64G0060 Cannabis sativa HOM05D003673 ORTHO05D004764 8.2e-175 617.5 432 71.3
MD17G1134800 Malus domestica HOM05D003673 ORTHO05D004764 8.2e-175 617.5 456 69.5
Nn7g37943 Nelumbo nucifera HOM05D003673 ORTHO05D004764 8.2e-175 617.5 432 72.5
Psat2g017880 Pisum sativum HOM05D003673 ORTHO05D004764 1.1e-174 617.1 426 73.0
unitig_899.g15456 Utricularia gibba HOM05D003673 ORTHO05D004764 2.4e-174 615.9 413 72.2
Hma1.2p1_0033F.1_g021200 Hydrangea macrophylla HOM05D003673 ORTHO05D004764 1.5e-173 613.2 434 69.8
BraA09t42028Z Brassica rapa HOM05D003673 ORTHO05D004764 3.4e-173 612.1 437 71.4
VMungo0647G2026 Vigna mungo HOM05D003673 ORTHO05D004764 2.9e-172 609.0 426 72.5
Aqoxy1G01891 Aquilegia oxysepala HOM05D003673 ORTHO05D004764 8.5e-172 607.4 426 72.1
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 5.5e-171 604.7 403 74.7
MBI18_g13605_MAGBIO Magnolia biondii HOM05D003673 ORTHO05D004764 1.6e-170 603.2 453 69.3
Aqoxy1G01890 Aquilegia oxysepala HOM05D003673 ORTHO05D004764 3.0e-169 599.0 424 70.3
Medtr5g090990 Medicago truncatula HOM05D003673 ORTHO05D004764 3.9e-169 598.6 422 71.6
Eucgr.A02024 Eucalyptus grandis HOM05D003673 ORTHO05D004764 6.7e-169 597.8 436 69.3
Medtr1g022325 Medicago truncatula HOM05D003673 ORTHO05D004764 8.8e-169 597.4 424 71.5
Phvul.008G194300 Phaseolus vulgaris HOM05D003673 ORTHO05D004764 2.6e-168 595.9 419 70.9
EL10Ac9g22831 Beta vulgaris HOM05D003673 ORTHO05D004764 5.7e-168 594.7 406 71.2
CDE05G0951 Ceratophyllum demersum HOM05D003673 ORTHO05D004764 5.7e-168 594.7 436 68.8
Eucgr.A02023 Eucalyptus grandis HOM05D003673 ORTHO05D004764 1.7e-164 583.2 436 67.2
PSO675G0095 Papaver somniferum HOM05D003673 ORTHO05D004764 2.9e-164 582.4 418 67.7
BcaB02g06780 Brassica carinata HOM05D003673 ORTHO05D004764 2.0e-160 569.7 425 68.7
COL.COLO4_38402 Corchorus olitorius HOM05D003673 ORTHO05D004764 4.8e-159 565.1 417 67.1
PSO675G5654 Papaver somniferum HOM05D003673 ORTHO05D004764 5.5e-155 551.6 418 65.3
CANSAT64G0777 Cannabis sativa HOM05D003673 ORTHO05D004764 3.6e-154 548.9 417 65.9
Lsat_1_v5_gn_6_42781 Lactuca sativa HOM05D003673 ORTHO05D004764 2.3e-153 546.2 418 64.6
Dinv07089 Davidia involucrata HOM05D003673 ORTHO05D004764 1.2e-152 543.9 393 71.5
Lsat_1_v5_gn_2_96721 Lactuca sativa HOM05D003673 ORTHO05D004764 3.4e-152 542.3 387 69.8
SEGI_30126 Sequoiadendron giganteum HOM05D003673 ORTHO05D004764 1.4e-150 537.0 421 65.1
Zm00001eb232960 Zea mays HOM05D003673 ORTHO05D004764 2.4e-150 536.2 424 64.9
Mapoly0126s0038 Marchantia polymorpha HOM05D003673 ORTHO05D004764 1.1e-147 527.3 438 61.4
CARHR006180 Cardamine hirsuta HOM05D003673 ORTHO05D004764 3.2e-147 525.8 376 70.7
HPP92_002268 Vanilla planifolia HOM05D003673 ORTHO05D004764 3.6e-146 522.3 396 65.7
AagrBONN_evm.TU.Sc2ySwM_368.1457 Anthoceros agrestis HOM05D003673 ORTHO05D004764 4.7e-146 521.9 420 63.3
RcHm_v2.0_Chr2g0152141 Rosa chinensis HOM05D003673 ORTHO05D004764 3.0e-145 519.2 371 70.1
AT1G06570 Arabidopsis thaliana HOM05D003673 ORTHO05D004764 8.8e-145 517.7 374 70.1
CDE02G2922 Ceratophyllum demersum HOM05D003673 ORTHO05D004764 6.3e-143 511.5 434 62.4
Pp3c1_27020 Physcomitrium patens HOM05D003673 ORTHO05D004764 8.3e-143 511.1 421 63.2
HanXRQChr02g0055101 Helianthus annuus HOM05D003673 ORTHO05D004764 1.1e-142 510.8 413 61.3
PSO170G5322 Papaver somniferum HOM05D003673 ORTHO05D004764 1.1e-142 510.8 423 61.7
PSO210G5105 Papaver somniferum HOM05D003673 ORTHO05D004764 1.3e-140 503.8 429 58.7
Pp3c2_15470 Physcomitrium patens HOM05D003673 ORTHO05D004764 1.3e-140 503.8 425 61.6
PSO210G1881 Papaver somniferum HOM05D003673 ORTHO05D004764 2.9e-140 502.7 422 60.2
PSO144G0168 Papaver somniferum HOM05D003673 ORTHO05D004764 1.5e-139 500.4 420 59.8
PSO210G6115 Papaver somniferum HOM05D003673 ORTHO05D004764 5.5e-139 498.4 423 60.0
Thecc.01G168800 Theobroma cacao HOM05D003673 ORTHO05D004764 1.6e-138 496.9 432 60.6
Actinidia24401 Actinidia chinensis HOM05D003673 ORTHO05D004764 2.8e-138 496.1 433 61.7
Cre09.g399030 Chlamydomonas reinhardtii HOM05D003673 ORTHO05D004764 3.2e-134 482.6 432 60.0
PRCOL_00001771 Prasinoderma coloniale HOM05D003673 ORTHO05D004764 1.7e-132 476.9 430 56.7
Cre09.g398993 Chlamydomonas reinhardtii HOM05D003673 ORTHO05D004764 1.5e-131 473.8 433 58.9
Lj8C8T1 Lonicera japonica HOM05D003673 ORTHO05D004764 4.3e-131 472.2 347 71.2
SMO358G0369 Selaginella moellendorffii HOM05D003673 ORTHO05D004764 5.6e-131 471.9 421 59.4
Solyc05g041200.4 Solanum lycopersicum HOM05D003673 ORTHO05D004764 1.4e-126 457.2 325 72.9
ECA233G6193 Erigeron canadensis HOM05D003673 ORTHO05D004764 7.0e-126 454.9 365 61.9
CBR_g41741 Chara braunii HOM05D003673 ORTHO05D004764 4.6e-125 452.2 456 53.3
CBR_g46667 Chara braunii HOM05D003673 ORTHO05D004764 1.2e-122 444.1 451 52.5
CBR_g8495 Chara braunii HOM05D003673 ORTHO05D004764 2.8e-122 443.0 445 52.8
AagrBONN_evm.TU.Sc2ySwM_368.1545 Anthoceros agrestis HOM05D003673 ORTHO05D004764 1.8e-121 440.3 416 56.2
Glyma.02G284600 Glycine max HOM05D003673 ORTHO05D004764 6.8e-121 438.3 344 64.8
MCO11G070 Micromonas commoda HOM05D003673 ORTHO05D004764 8.9e-121 438.0 431 56.1
Potri.005G205200 Populus trichocarpa HOM05D003673 ORTHO05D004764 1.9e-118 430.3 446 57.0
Zm00001eb304950 Zea mays HOM05D003673 ORTHO05D004764 1.6e-114 417.2 410 53.9
ATR0763G164 Amborella trichopoda HOM05D003673 ORTHO05D004764 5.4e-110 402.1 283 70.7
SMO118G0557 Selaginella moellendorffii HOM05D003673 ORTHO05D004764 1.0e-108 397.9 435 50.3
TPR.G25540 Trifolium pratense HOM05D003673 ORTHO05D004764 2.1e-106 390.2 421 50.6
Ah.02g114000 Amaranthus hybridus HOM05D003673 ORTHO05D004764 1.8e-105 387.1 369 54.7
Medtr5g090980 Medicago truncatula HOM05D003673 ORTHO05D004764 8.4e-103 378.3 374 55.9
Os02g0168100 Oryza sativa ssp. japonica HOM05D003673 ORTHO05D004764 1.3e-100 370.9 226 76.5
MD09G1148400 Malus domestica HOM05D003673 ORTHO05D004764 1.6e-98 364.0 390 54.1
MD13G1156600 Malus domestica HOM05D003673 ORTHO05D004764 2.6e-96 356.7 379 52.5
arahy.Tifrunner.gnm1.ann1.KE2YGW Arachis hypogaea HOM05D003673 ORTHO05D004764 1.8e-89 334.0 379 54.1
Atru.chr6.2046 Acer truncatum HOM05D003673 ORTHO05D004764 4.6e-85 319.3 174 85.6
AUR62016194 Chenopodium quinoa HOM05D003673 ORTHO05D004764 3.7e-82 309.7 295 54.9
arahy.Tifrunner.gnm1.ann1.3I6JIA Arachis hypogaea HOM05D003673 ORTHO05D004764 2.1e-74 283.9 239 64.4
Thecc.01G169100 Theobroma cacao HOM05D003673 ORTHO05D004764 4.6e-69 266.2 247 59.5
AUR62039301 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.9e-62 244.2 203 58.1
AUR62044533 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.9e-62 244.2 203 58.1
AUR62035118 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.4e-60 238.0 196 58.7
AUR62039293 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.4e-60 238.0 196 58.7
AUR62039297 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.4e-60 238.0 196 58.7
Cc05_g01440 Coffea canephora HOM05D003673 ORTHO05D004764 8.5e-55 218.8 116 87.9
AUR62035117 Chenopodium quinoa HOM05D003673 ORTHO05D017143 5.7e-51 206.1 202 54.0
AUR62039294 Chenopodium quinoa HOM05D003673 ORTHO05D017143 5.7e-51 206.1 202 54.0
AUR62039298 Chenopodium quinoa HOM05D003673 ORTHO05D017143 5.7e-51 206.1 202 54.0
GSVIVG01020837001 Vitis vinifera HOM05D003673 ORTHO05D004764 2.2e-50 204.1 113 83.2
FvH4_5g31130 Fragaria vesca HOM05D003673 ORTHO05D004764 1.1e-38 165.2 88 86.4
FAN18G0200 Fragaria x ananassa HOM05D003673 ORTHO05D004764 1.2e-37 161.8 88 84.1
Haze_25279 Corylus avellana HOM05D003673 ORTHO05D004764 8.8e-36 155.6 162 54.3
Cfa023357 Carpinus fangiana HOM05D003673 ORTHO05D017143 6.3e-34 149.4 105 71.4
Atru.chr6.2045 Acer truncatum HOM05D003673 ORTHO05D017143 3.5e-32 143.7 93 72.0
AUR62044532 Chenopodium quinoa HOM05D003673 ORTHO05D017143 4.5e-32 143.3 117 60.7
MD05G1024200 Malus domestica HOM05D003673 ORTHO05D004764 1.1e-30 138.7 76 81.6
Dinv42661 Davidia involucrata HOM05D002888 ORTHO05D003321 7.2e-30 136.0 145 52.4
COL.COLO4_38401 Corchorus olitorius HOM05D003673 ORTHO05D004764 2.0e-27 127.9 148 51.4
COL.COLO4_20758 Corchorus olitorius HOM05D003673 ORTHO05D004764 9.1e-25 119.0 71 78.9
GSVIVG01013079001 Vitis vinifera HOM05D003673 ORTHO05D004764 3.8e-23 113.6 65 76.9
ATR0763G191 Amborella trichopoda HOM05D003673 ORTHO05D017143 5.0e-23 113.2 81 65.4
CARHR006190 Cardamine hirsuta HOM05D003673 ORTHO05D004764 8.9e-20 102.4 56 80.4
TPR.G10161 Trifolium pratense HOM05D003673 ORTHO05D004764 1.2e-19 102.1 55 81.8
AUR62039302 Chenopodium quinoa HOM05D003673 ORTHO05D017143 2.2e-18 97.8 123 47.2
Dinv21956 Davidia involucrata HOM05D003673 ORTHO05D004764 2.5e-14 84.3 98 51.0
COL.COLO4_19675 Corchorus olitorius HOM05D003673 ORTHO05D163473 1.0e-12 79.0 59 64.4
Lj8C8T3 Lonicera japonica HOM05D003673 ORTHO05D004764 1.5e-11 75.1 42 78.6
MD05G1024100 Malus domestica HOM05D003673 ORTHO05D017143 4.6e-08 63.5 58 55.2
FAN21G3810 Fragaria x ananassa HOM05D003673 ORTHO05D025527 8.6e-07 59.3 138 35.5
FAN10G3644 Fragaria x ananassa HOM05D003673 ORTHO05D025527 1.5e-06 58.5 138 34.8
FAN18G2996 Fragaria x ananassa HOM05D003673 ORTHO05D025527 9.5e-06 55.8 138 34.8


User provided reference genes

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