Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050326.1 Olea europaea HOM05D005323 ORTHO05D006820 6.8e-145 517.7 342 100.0
Oeu015708.1 Olea europaea HOM05D005323 ORTHO05D006820 6.6e-140 501.1 342 93.0
SalBow6G4087 Salvia bowleyana HOM05D005323 ORTHO05D006820 5.8e-128 461.5 342 87.1
MSTRG.22040 Avicennia marina HOM05D005323 ORTHO05D006820 1.4e-126 456.8 342 84.5
Peaxi162Scf00883g00035 Petunia axillaris HOM05D005323 ORTHO05D006820 7.1e-126 454.5 342 76.0
CiPaw.02G099700 Carya illinoinensis HOM05D005323 ORTHO05D006820 9.3e-126 454.1 339 76.1
Dinv33215 Davidia involucrata HOM05D005323 ORTHO05D006820 1.6e-125 453.4 339 81.1
TPR.G17865 Trifolium pratense HOM05D005323 ORTHO05D006820 1.6e-125 453.4 339 82.3
Glyma.19G114900 Glycine max HOM05D005323 ORTHO05D006820 3.5e-125 452.2 339 82.6
QL10p057057 Quercus lobata HOM05D005323 ORTHO05D006820 3.5e-125 452.2 338 79.9
Glyma.16G037700 Glycine max HOM05D005323 ORTHO05D006820 4.6e-125 451.8 339 75.8
arahy.Tifrunner.gnm1.ann1.353MUE Arachis hypogaea HOM05D005323 ORTHO05D006820 7.8e-125 451.1 339 75.5
arahy.Tifrunner.gnm1.ann1.157ZG7 Arachis hypogaea HOM05D005323 ORTHO05D006820 1.0e-124 450.7 338 75.4
Atru.chr4.1467 Acer truncatum HOM05D005323 ORTHO05D006820 1.7e-124 449.9 339 89.4
Atru.chr4.1493 Acer truncatum HOM05D005323 ORTHO05D006820 1.7e-124 449.9 339 89.4
Phvul.001G114300 Phaseolus vulgaris HOM05D005323 ORTHO05D006820 3.9e-124 448.7 339 78.8
Medtr7g086360 Medicago truncatula HOM05D005323 ORTHO05D006820 5.1e-124 448.4 339 79.9
EL10Ac4g07922 Beta vulgaris HOM05D005323 ORTHO05D006820 6.6e-124 448.0 340 75.9
Dinv18320 Davidia involucrata HOM05D005323 ORTHO05D006820 6.6e-124 448.0 339 75.5
Lalb_Chr14g0364721 Lupinus albus HOM05D005323 ORTHO05D006820 6.6e-124 448.0 339 75.8
Manes.01G016900 Manihot esculenta HOM05D005323 ORTHO05D006820 1.5e-123 446.8 339 76.7
Eucgr.L00010 Eucalyptus grandis HOM05D005323 ORTHO05D006820 3.3e-123 445.7 339 75.5
Lj1g0017737 Lotus japonicus HOM05D005323 ORTHO05D006820 3.3e-123 445.7 338 75.1
Prupe.1G071000 Prunus persica HOM05D005323 ORTHO05D006820 4.3e-123 445.3 339 84.4
AUR62031624 Chenopodium quinoa HOM05D005323 ORTHO05D006820 5.6e-123 444.9 339 74.9
Migut.N03056 Erythranthe guttata HOM05D005323 ORTHO05D006820 5.6e-123 444.9 342 81.0
Migut.O00692 Erythranthe guttata HOM05D005323 ORTHO05D006820 5.6e-123 444.9 342 81.0
MELO3C011851.2 Cucumis melo HOM05D005323 ORTHO05D006820 7.3e-123 444.5 339 79.1
MD16G1243600 Malus domestica HOM05D005323 ORTHO05D006820 7.3e-123 444.5 339 84.1
Cfa015676 Carpinus fangiana HOM05D005323 ORTHO05D006820 1.3e-122 443.7 339 77.6
Haze_00854 Corylus avellana HOM05D005323 ORTHO05D006820 1.3e-122 443.7 339 77.6
Sed0013916 Sechium edule HOM05D005323 ORTHO05D006820 2.8e-122 442.6 339 78.2
Ciclev10020927m.g Citrus clementina HOM05D005323 ORTHO05D006820 4.8e-122 441.8 339 82.3
CANSAT56G3038 Cannabis sativa HOM05D005323 ORTHO05D006820 1.8e-121 439.9 339 82.0
CsaV3_5G030120 Cucumis sativus L. HOM05D005323 ORTHO05D006820 1.8e-121 439.9 339 78.8
Sabra19G0108600 Salix brachista HOM05D005323 ORTHO05D006820 1.8e-121 439.9 339 79.4
PGSC0003DMG400026328 Solanum tuberosum HOM05D005323 ORTHO05D006820 3.1e-121 439.1 342 75.4
Rhsim09G0008200 Rhododendron simsii HOM05D005323 ORTHO05D006820 4.0e-121 438.7 340 74.1
FAN07G1750 Fragaria x ananassa HOM05D005323 ORTHO05D006820 5.3e-121 438.3 339 82.3
COL.COLO4_38123 Corchorus olitorius HOM05D005323 ORTHO05D006820 1.5e-120 436.8 339 82.3
Duzib212G0476 Durio zibethinus HOM05D005323 ORTHO05D006820 3.4e-120 435.6 339 82.9
FAN22G1090 Fragaria x ananassa HOM05D005323 ORTHO05D006820 4.5e-120 435.3 339 82.0
RcHm_v2.0_Chr4g0405641 Rosa chinensis HOM05D005323 ORTHO05D006820 4.5e-120 435.3 339 82.0
Actinidia27124 Actinidia chinensis HOM05D005323 ORTHO05D006820 5.8e-120 434.9 318 77.7
Nitab4.5_0000285g0060 Nicotiana tabacum HOM05D005323 ORTHO05D006820 5.8e-120 434.9 342 74.6
Potri.019G096900 Populus trichocarpa HOM05D005323 ORTHO05D006820 5.8e-120 434.9 339 80.2
FvH4_4g10290 Fragaria vesca HOM05D005323 ORTHO05D006820 9.9e-120 434.1 339 81.7
Sopen03g013260 Solanum pennellii HOM05D005323 ORTHO05D006820 9.9e-120 434.1 342 74.9
FAN17G0326 Fragaria x ananassa HOM05D005323 ORTHO05D006820 1.3e-119 433.7 339 81.4
Gohir.D10G122100 Gossypium hirsutum HOM05D005323 ORTHO05D006820 1.7e-119 433.3 339 82.3
Gorai.011G134300 Gossypium raimondii HOM05D005323 ORTHO05D006820 1.7e-119 433.3 339 82.3
Nitab4.5_0002913g0040 Nicotiana tabacum HOM05D005323 ORTHO05D006820 4.9e-119 431.8 338 75.1
Gohir.A10G144900 Gossypium hirsutum HOM05D005323 ORTHO05D006820 8.4e-119 431.0 339 82.0
FAN12G3871 Fragaria x ananassa HOM05D005323 ORTHO05D006820 1.1e-118 430.6 339 81.4
VMungo1383G1964 Vigna mungo HOM05D005323 ORTHO05D006820 1.1e-118 430.6 327 75.2
Lj6P177T10 Lonicera japonica HOM05D005323 ORTHO05D006820 1.4e-118 430.3 342 75.7
CSS0020323 Camellia sinensis var. sinensis HOM05D005323 ORTHO05D006820 3.2e-118 429.1 338 74.0
Duzib151G0361 Durio zibethinus HOM05D005323 ORTHO05D006820 5.4e-118 428.3 339 81.4
THA.LOC104804129 Tarenaya hassleriana HOM05D005323 ORTHO05D006820 5.4e-118 428.3 339 80.8
FAN12G3690 Fragaria x ananassa HOM05D005323 ORTHO05D006820 3.5e-117 425.6 334 81.4
Ca_08300_v3 Cicer arietinum L. HOM05D005323 ORTHO05D006820 3.9e-116 422.2 339 76.7
Thecc.04G163800 Theobroma cacao HOM05D005323 ORTHO05D006820 3.9e-116 422.2 339 80.5
TAR362G1141 Trochodendron aralioides HOM05D005323 ORTHO05D006820 3.9e-116 422.2 340 83.5
Sc16g0006150 Simmondsia chinensis HOM05D005323 ORTHO05D006820 5.1e-116 421.8 339 73.5
Cpa.g.sc17.20 Carica papaya HOM05D005323 ORTHO05D006820 3.3e-115 419.1 339 73.2
unitig_22.g5706 Utricularia gibba HOM05D005323 ORTHO05D006820 4.3e-115 418.7 342 83.0
Cc11_g02260 Coffea canephora HOM05D005323 ORTHO05D006820 7.4e-115 417.9 342 75.1
Aqoxy4G03253 Aquilegia oxysepala HOM05D005323 ORTHO05D006820 2.8e-114 416.0 339 76.1
SGA_v2.0_scaffold19G08852 Striga asiatica HOM05D005323 ORTHO05D006820 4.8e-114 415.2 342 75.1
TWI15G0703 Tripterygium wilfordii HOM05D005323 ORTHO05D006820 8.1e-114 414.5 339 79.9
TWI63G1046 Tripterygium wilfordii HOM05D005323 ORTHO05D006820 1.4e-113 413.7 339 79.6
AL4G42640 Arabidopsis lyrata HOM05D005323 ORTHO05D006820 3.1e-113 412.5 342 77.2
ATR0743G149 Amborella trichopoda HOM05D005323 ORTHO05D006820 5.3e-113 411.8 320 72.2
CARHR138940 Cardamine hirsuta HOM05D005323 ORTHO05D006820 5.8e-112 408.3 342 80.4
PSO675G7169 Papaver somniferum HOM05D005323 ORTHO05D006820 1.7e-111 406.8 338 71.6
HPP92_028318 Vanilla planifolia HOM05D005323 ORTHO05D006820 3.8e-111 405.6 339 69.9
DCAR_005453 Daucus carota HOM05D005323 ORTHO05D006820 4.9e-111 405.2 339 74.3
PGR042G1263 Punica granatum HOM05D005323 ORTHO05D006820 4.9e-111 405.2 339 70.5
AT2G43770 Arabidopsis thaliana HOM05D005323 ORTHO05D006820 6.4e-111 404.8 342 76.6
Carub.0004s2630 Capsella rubella HOM05D005323 ORTHO05D006820 1.6e-109 400.2 342 76.0
Lsat_1_v5_gn_0_9241 Lactuca sativa HOM05D005323 ORTHO05D006820 2.1e-109 399.8 339 74.3
Sp4g25840 Schrenkiella parvula HOM05D005323 ORTHO05D006820 3.5e-109 399.1 342 76.0
Psat0s4033g0160 Pisum sativum HOM05D005323 ORTHO05D006820 4.6e-109 398.7 339 71.7
SEGI_06199 Sequoiadendron giganteum HOM05D005323 ORTHO05D006820 5.1e-108 395.2 310 71.6
Aa31LG1G25490 Aethionema arabicum HOM05D005323 ORTHO05D006820 3.3e-107 392.5 339 76.7
Zm00001eb389600 Zea mays HOM05D005323 ORTHO05D006820 5.6e-107 391.7 337 72.7
Os06g0653800 Oryza sativa ssp. japonica HOM05D005323 ORTHO05D006820 3.7e-106 389.0 338 72.2
Thhalv10006086m.g Eutrema salsugineum HOM05D005323 ORTHO05D006820 1.1e-105 387.5 329 77.2
BcaB02g08902 Brassica carinata HOM05D005323 ORTHO05D006820 1.8e-105 386.7 342 74.3
SHI06205 Sapria himalayana HOM05D005323 ORTHO05D000023 4.0e-105 385.6 322 69.6
Zm00001eb274960 Zea mays HOM05D005323 ORTHO05D006820 4.0e-105 385.6 336 71.7
Mapoly0049s0059 Marchantia polymorpha HOM05D005323 ORTHO05D006820 1.2e-104 384.0 310 71.3
Sp5g03440 Schrenkiella parvula HOM05D005323 ORTHO05D006820 1.2e-104 384.0 329 69.3
A07p24790 Brassica napus HOM05D005323 ORTHO05D006820 3.4e-104 382.5 329 69.3
BraA07t30124Z Brassica rapa HOM05D005323 ORTHO05D006820 3.4e-104 382.5 329 69.3
A05p03980 Brassica napus HOM05D005323 ORTHO05D006820 4.5e-104 382.1 342 74.0
BraA05t19386Z Brassica rapa HOM05D005323 ORTHO05D006820 4.5e-104 382.1 342 74.0
ECA240G0264 Erigeron canadensis HOM05D005323 ORTHO05D006820 4.5e-104 382.1 339 67.6
BcaC02g12364 Brassica carinata HOM05D005323 ORTHO05D006820 1.0e-103 380.9 342 73.7
C04p04730 Brassica napus HOM05D005323 ORTHO05D006820 1.0e-103 380.9 342 73.7
BolC4t22103H Brassica oleracea HOM05D005323 ORTHO05D006820 1.0e-103 380.9 342 73.7
HanXRQChr01g0001231 Helianthus annuus HOM05D005323 ORTHO05D006820 1.7e-103 380.2 312 72.1
BcaC08g45003 Brassica carinata HOM05D005323 ORTHO05D006820 3.8e-103 379.0 329 69.0
C06p26380 Brassica napus HOM05D005323 ORTHO05D006820 3.8e-103 379.0 329 69.0
AagrBONN_evm.TU.Sc2ySwM_228.3872 Anthoceros agrestis HOM05D005323 ORTHO05D006820 1.4e-102 377.1 310 73.2
BcaB02g07449 Brassica carinata HOM05D005323 ORTHO05D006820 1.6e-101 373.6 330 67.3
Thhalv10001531m.g Eutrema salsugineum HOM05D005323 ORTHO05D006820 1.3e-100 370.5 342 72.5
Eucgr.L00018 Eucalyptus grandis HOM05D005323 ORTHO05D006820 6.7e-100 368.2 340 57.9
Gorai.005G008900 Gossypium raimondii HOM05D005323 ORTHO05D006820 4.2e-94 349.0 339 55.5
HPP92_017571 Vanilla planifolia HOM05D005323 ORTHO05D006820 1.6e-93 347.1 314 57.0
Pp3c6_28640 Physcomitrium patens HOM05D005323 ORTHO05D006820 7.9e-93 344.7 309 66.3
Actinidia28377 Actinidia chinensis HOM05D005323 ORTHO05D006820 3.9e-92 342.4 303 59.4
Pp3c5_3050 Physcomitrium patens HOM05D005323 ORTHO05D006820 5.7e-91 338.6 309 65.0
CBR_g4366 Chara braunii HOM05D005323 ORTHO05D006820 4.4e-83 312.4 273 74.7
GSVIVG01038180001 Vitis vinifera HOM05D005323 ORTHO05D006820 1.4e-81 307.4 217 84.3
AUR62020514 Chenopodium quinoa HOM05D005323 ORTHO05D006820 8.5e-79 298.1 340 50.0
Lj6C229G10 Lonicera japonica HOM05D005323 ORTHO05D006820 3.6e-77 292.7 279 60.6
Solyc03g059100.3 Solanum lycopersicum HOM05D005323 ORTHO05D006820 5.3e-73 278.9 214 83.6
CiPaw.01G169200 Carya illinoinensis HOM05D005323 ORTHO05D006820 1.2e-72 277.7 327 53.5
Sabra19G0107500 Salix brachista HOM05D005323 ORTHO05D006820 2.9e-71 273.1 195 75.4
MCO10G164 Micromonas commoda HOM05D005323 ORTHO05D006820 7.2e-70 268.5 342 59.4
Psat6g090360 Pisum sativum HOM05D005323 ORTHO05D006820 1.6e-69 267.3 193 66.3
Cre06.g255400 Chlamydomonas reinhardtii HOM05D005323 ORTHO05D006820 9.7e-67 258.1 314 49.0
Hma1.2p1_1156F.1_g262335 Hydrangea macrophylla HOM05D005323 ORTHO05D006820 6.3e-58 228.8 172 65.1
Hma1.2p1_1156F.1_g262340 Hydrangea macrophylla HOM05D005323 ORTHO05D006820 6.3e-58 228.8 172 65.1
QL10p056998 Quercus lobata HOM05D005323 ORTHO05D006820 2.0e-56 223.8 207 55.6
PRCOL_00003404 Prasinoderma coloniale HOM05D005323 ORTHO05D006820 2.1e-53 213.8 308 53.6
Haze_27161 Corylus avellana HOM05D005323 ORTHO05D006820 8.9e-52 208.4 298 57.7
Psat4g031880 Pisum sativum HOM05D005323 ORTHO05D006820 1.8e-36 157.5 168 61.9
Lj6E231T0 Lonicera japonica HOM05D005323 ORTHO05D006820 1.0e-31 141.7 88 76.1
Lj6A185T28 Lonicera japonica HOM05D005323 ORTHO05D006820 1.2e-27 128.3 211 38.4
Cfa023113 Carpinus fangiana HOM05D005323 ORTHO05D017328 2.6e-27 127.1 290 25.2
Potri.013G128001 Populus trichocarpa HOM05D005323 ORTHO05D006820 4.6e-24 116.3 108 55.6
Psat2g031000 Pisum sativum HOM05D003141 ORTHO05D003633 7.3e-22 109.0 54 87.0
C04p70770 Brassica napus HOM05D000037 ORTHO05D000419 6.2e-21 105.9 83 61.4
BcaC02g07149 Brassica carinata HOM05D000037 ORTHO05D091408 1.4e-20 104.8 78 62.8
DCAR_011058 Daucus carota HOM05D005323 ORTHO05D033416 1.8e-20 104.4 57 80.7
Lj6C181T4 Lonicera japonica HOM05D005323 ORTHO05D006820 5.2e-20 102.8 74 64.9
C04p32940 Brassica napus HOM05D005323 ORTHO05D033416 4.3e-14 83.2 42 92.9
BolC4t24857H Brassica oleracea HOM05D005323 ORTHO05D033416 4.3e-14 83.2 42 92.9
Lj6A188T23 Lonicera japonica HOM05D005323 ORTHO05D006820 9.9e-11 72.0 32 93.8
Lj6E201T0 Lonicera japonica HOM05D005323 ORTHO05D006820 1.4e-09 68.2 52 73.1
CDE04G2061 Ceratophyllum demersum HOM05D000684 ORTHO05D000688 3.9e-07 60.1 99 35.4
Sabra11G0103900 Salix brachista HOM05D000684 ORTHO05D000688 8.7e-07 58.9 99 36.4
SalBow4G1900 Salvia bowleyana HOM05D003606 ORTHO05D004650 8.7e-07 58.9 179 43.6
THA.LOC104818079 Tarenaya hassleriana HOM05D000684 ORTHO05D000688 1.1e-06 58.5 99 35.4
BcaB06g29558 Brassica carinata HOM05D000684 ORTHO05D000688 1.5e-06 58.2 99 33.3
CSS0036684 Camellia sinensis var. sinensis HOM05D003006 ORTHO05D003438 1.5e-06 58.2 88 35.2
CDE03G0436 Ceratophyllum demersum HOM05D000684 ORTHO05D000688 1.5e-06 58.2 99 35.4
Eucgr.F03314 Eucalyptus grandis HOM05D000684 ORTHO05D000688 1.5e-06 58.2 99 33.3
Pp3c2_24290 Physcomitrium patens HOM05D000684 ORTHO05D000688 1.5e-06 58.2 100 32.0
SHI22520 Sapria himalayana HOM05D003006 ORTHO05D003438 1.5e-06 58.2 88 34.1
SMO358G0162 Selaginella moellendorffii HOM05D000684 ORTHO05D000688 1.5e-06 58.2 100 33.0
BcaC05g28991 Brassica carinata HOM05D000684 ORTHO05D000688 1.9e-06 57.8 93 34.4
CARHR043310 Cardamine hirsuta HOM05D000684 ORTHO05D000688 1.9e-06 57.8 99 34.3
Hund00228 Selenicereus undatus HOM05D003606 ORTHO05D004650 1.9e-06 57.8 183 40.4
SEGI_23822 Sequoiadendron giganteum HOM05D000684 ORTHO05D000688 1.9e-06 57.8 100 31.0
Dinv38082 Davidia involucrata HOM05D003006 ORTHO05D003438 2.5e-06 57.4 88 34.1
Gohir.D01G023421 Gossypium hirsutum HOM05D003335 ORTHO05D003853 2.5e-06 57.4 174 25.3
Potri.001G399600 Populus trichocarpa HOM05D000684 ORTHO05D000688 2.5e-06 57.4 99 34.3
Carub.0003s1500 Capsella rubella HOM05D000684 ORTHO05D000688 3.3e-06 57.0 99 34.3
CARHR090320 Cardamine hirsuta HOM05D000684 ORTHO05D000688 3.3e-06 57.0 99 33.3
Thhalv10020057m.g Eutrema salsugineum HOM05D000684 ORTHO05D000688 3.3e-06 57.0 99 33.3
Potri.011G119500 Populus trichocarpa HOM05D000684 ORTHO05D000688 3.3e-06 57.0 99 35.4
Prupe.3G290400 Prunus persica HOM05D004386 ORTHO05D005247 3.3e-06 57.0 88 38.6
BcaC08g44044 Brassica carinata HOM05D000684 ORTHO05D000688 4.3e-06 56.6 99 33.3
Migut.D01046 Erythranthe guttata HOM05D003006 ORTHO05D003438 4.3e-06 56.6 89 31.5
Gohir.A01G025900 Gossypium hirsutum HOM05D003335 ORTHO05D003853 4.3e-06 56.6 167 24.6
PSO210G6896 Papaver somniferum HOM05D003006 ORTHO05D003438 4.3e-06 56.6 91 34.1
PSO210G7221 Papaver somniferum HOM05D003006 ORTHO05D003438 4.3e-06 56.6 91 34.1
Pp3c11_15840 Physcomitrium patens HOM05D000684 ORTHO05D000688 4.3e-06 56.6 96 32.3
SMO142G0013 Selaginella moellendorffii HOM05D000684 ORTHO05D000688 4.3e-06 56.6 96 33.3
AL3G27760 Arabidopsis lyrata HOM05D000684 ORTHO05D000688 5.6e-06 56.2 93 34.4
BcaB02g10928 Brassica carinata HOM05D000684 ORTHO05D000688 5.6e-06 56.2 99 33.3
Gorai.002G026500 Gossypium raimondii HOM05D003335 ORTHO05D003853 5.6e-06 56.2 167 24.6
Oeu002690.1 Olea europaea HOM05D002999 ORTHO05D003137 5.6e-06 56.2 305 21.3
MELO3C015879.2 Cucumis melo HOM05D002999 ORTHO05D003137 7.3e-06 55.8 224 22.3
Duzib170G0222 Durio zibethinus HOM05D000684 ORTHO05D000688 7.3e-06 55.8 99 32.3
Thhalv10011249m.g Eutrema salsugineum HOM05D000684 ORTHO05D000688 7.3e-06 55.8 99 33.3
FAN06G2132 Fragaria x ananassa HOM05D003606 ORTHO05D004650 7.3e-06 55.8 183 42.6
MCO15G332 Micromonas commoda HOM05D000684 ORTHO05D000688 7.3e-06 55.8 100 32.0
QL05p027149 Quercus lobata HOM05D003006 ORTHO05D003438 7.3e-06 55.8 88 34.1
HPP92_020057 Vanilla planifolia HOM05D000684 ORTHO05D000688 7.3e-06 55.8 91 34.1
Carub.0001s4225 Capsella rubella HOM05D000684 ORTHO05D000688 9.6e-06 55.5 99 33.3
Ciclev10019830m.g Citrus clementina HOM05D002999 ORTHO05D003137 9.6e-06 55.5 232 22.8
Lj3A990T71 Lonicera japonica HOM05D003606 ORTHO05D004650 9.6e-06 55.5 164 26.8
Pp3c1_13190 Physcomitrium patens HOM05D000684 ORTHO05D000688 9.6e-06 55.5 100 31.0


User provided reference genes

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