Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050047.1 Olea europaea HOM05D004132 ORTHO05D018840 5.9e-73 277.3 130 100.0
Oeu056055.1 Olea europaea HOM05D004132 ORTHO05D006273 2.8e-51 205.3 121 82.6
Dinv31163 Davidia involucrata HOM05D004132 ORTHO05D006273 2.7e-49 198.7 115 82.6
SGA_v2.0_scaffold298G47699 Striga asiatica HOM05D004132 ORTHO05D006273 5.9e-49 197.6 121 78.5
QL04p095526 Quercus lobata HOM05D004132 ORTHO05D006273 5.0e-48 194.5 121 76.9
Migut.D01293 Erythranthe guttata HOM05D004132 ORTHO05D006273 6.6e-48 194.1 121 78.5
CANSAT78G2113 Cannabis sativa HOM05D004132 ORTHO05D006273 8.6e-48 193.7 121 76.9
Dinv25393 Davidia involucrata HOM05D004132 ORTHO05D006273 8.6e-48 193.7 115 80.9
Cfa000667 Carpinus fangiana HOM05D004132 ORTHO05D006273 1.1e-47 193.4 121 76.9
FAN16G0015 Fragaria x ananassa HOM05D004132 ORTHO05D006273 1.1e-47 193.4 121 76.0
RcHm_v2.0_Chr3g0486261 Rosa chinensis HOM05D004132 ORTHO05D006273 1.1e-47 193.4 121 76.9
Hund06337 Selenicereus undatus HOM05D004132 ORTHO05D006273 1.1e-47 193.4 121 76.0
Atru.chr3.3175 Acer truncatum HOM05D004132 ORTHO05D006273 1.9e-47 192.6 121 75.2
unitig_37.g12049 Utricularia gibba HOM05D004132 ORTHO05D006273 1.9e-47 192.6 115 79.1
CiPaw.09G074000 Carya illinoinensis HOM05D004132 ORTHO05D006273 2.5e-47 192.2 121 76.9
FvH4_3g12680 Fragaria vesca HOM05D004132 ORTHO05D006273 2.5e-47 192.2 121 76.0
Sopen05g034650 Solanum pennellii HOM05D004132 ORTHO05D006273 2.5e-47 192.2 121 75.2
PGSC0003DMG400023334 Solanum tuberosum HOM05D004132 ORTHO05D006273 2.5e-47 192.2 121 76.0
MD10G1229100 Malus domestica HOM05D004132 ORTHO05D006273 3.3e-47 191.8 115 78.3
Solyc05g056260.2 Solanum lycopersicum HOM05D004132 ORTHO05D006273 3.3e-47 191.8 121 75.2
Peaxi162Scf00858g00012 Petunia axillaris HOM05D004132 ORTHO05D006273 4.3e-47 191.4 113 79.6
RcHm_v2.0_Chr5g0020641 Rosa chinensis HOM05D004132 ORTHO05D006273 4.3e-47 191.4 121 76.0
Gorai.011G155000 Gossypium raimondii HOM05D004132 ORTHO05D006273 5.6e-47 191.0 121 77.7
CAN.G1921.3 Capsicum annuum HOM05D004132 ORTHO05D006273 7.3e-47 190.7 121 75.2
FAN25G0118 Fragaria x ananassa HOM05D004132 ORTHO05D006273 7.3e-47 190.7 121 76.0
MD05G1248600 Malus domestica HOM05D004132 ORTHO05D006273 7.3e-47 190.7 115 78.3
Rhsim04G0004400 Rhododendron simsii HOM05D004132 ORTHO05D006273 7.3e-47 190.7 123 76.4
CSS0017532 Camellia sinensis var. sinensis HOM05D004132 ORTHO05D006273 9.5e-47 190.3 115 79.1
Haze_06152 Corylus avellana HOM05D004132 ORTHO05D006273 9.5e-47 190.3 121 76.0
Prupe.4G115500 Prunus persica HOM05D004132 ORTHO05D006273 1.2e-46 189.9 121 74.4
SGA_v2.0_scaffold175G39350 Striga asiatica HOM05D004132 ORTHO05D006273 1.2e-46 189.9 121 76.9
GSVIVG01010923001 Vitis vinifera HOM05D004132 ORTHO05D006273 1.6e-46 189.5 116 78.4
Manes.12G056400 Manihot esculenta HOM05D004132 ORTHO05D006273 2.1e-46 189.1 121 75.2
Nitab4.5_0000582g0060 Nicotiana tabacum HOM05D004132 ORTHO05D006273 2.1e-46 189.1 121 74.4
PSO063G4358 Papaver somniferum HOM05D004132 ORTHO05D006273 2.1e-46 189.1 116 76.7
TAR626G0350 Trochodendron aralioides HOM05D004132 ORTHO05D006273 2.1e-46 189.1 121 75.2
Cpa.g.sc84.15 Carica papaya HOM05D004132 ORTHO05D006273 2.8e-46 188.7 121 75.2
Gohir.A10G126900 Gossypium hirsutum HOM05D004132 ORTHO05D006273 2.8e-46 188.7 121 76.9
Gohir.D10G139300 Gossypium hirsutum HOM05D004132 ORTHO05D006273 2.8e-46 188.7 121 76.9
PSO421G0604 Papaver somniferum HOM05D004132 ORTHO05D006273 2.8e-46 188.7 116 76.7
Thecc.04G197300 Theobroma cacao HOM05D004132 ORTHO05D006273 2.8e-46 188.7 121 76.9
ClCG01G025610 Citrullus lanatus HOM05D004132 ORTHO05D006273 3.6e-46 188.3 121 74.4
COL.COLO4_20206 Corchorus olitorius HOM05D004132 ORTHO05D006273 4.7e-46 188.0 121 75.2
Duzib151G0861 Durio zibethinus HOM05D004132 ORTHO05D006273 4.7e-46 188.0 121 76.9
Sc08g0001660 Simmondsia chinensis HOM05D004132 ORTHO05D006273 4.7e-46 188.0 121 74.4
Potri.013G105200 Populus trichocarpa HOM05D004132 ORTHO05D006273 6.1e-46 187.6 121 74.4
AUR62013238 Chenopodium quinoa HOM05D004132 ORTHO05D006273 8.0e-46 187.2 119 73.9
Sabra13G0090900 Salix brachista HOM05D004132 ORTHO05D006273 8.0e-46 187.2 121 74.4
Ah.04g159510 Amaranthus hybridus HOM05D004132 ORTHO05D006273 1.0e-45 186.8 121 72.7
MSTRG.16365 Avicennia marina HOM05D004132 ORTHO05D006273 1.0e-45 186.8 121 73.6
SalBow7G0375 Salvia bowleyana HOM05D004132 ORTHO05D006273 1.0e-45 186.8 121 74.4
Ah.06g194990 Amaranthus hybridus HOM05D004132 ORTHO05D006273 1.4e-45 186.4 121 72.7
Sed0002662 Sechium edule HOM05D004132 ORTHO05D006273 1.4e-45 186.4 121 72.7
THA.LOC104826464 Tarenaya hassleriana HOM05D004132 ORTHO05D006273 1.4e-45 186.4 116 76.7
DCAR_001290 Daucus carota HOM05D004132 ORTHO05D006273 1.8e-45 186.0 116 78.4
EL10Ac9g22320 Beta vulgaris HOM05D004132 ORTHO05D006273 2.3e-45 185.7 121 72.7
MBI07_g09898_MAGBIO Magnolia biondii HOM05D004132 ORTHO05D006273 3.1e-45 185.3 121 74.4
Oeu056054.1 Olea europaea HOM05D004132 ORTHO05D006273 3.1e-45 185.3 107 81.3
QL04p095492 Quercus lobata HOM05D004132 ORTHO05D018840 3.1e-45 185.3 110 79.1
VMungo1383G0131 Vigna mungo HOM05D004132 ORTHO05D006273 4.0e-45 184.9 121 73.6
Nn6g34644 Nelumbo nucifera HOM05D004132 ORTHO05D006273 6.8e-45 184.1 121 73.6
Cc09_g05560 Coffea canephora HOM05D004132 ORTHO05D006273 1.2e-44 183.3 115 75.7
THA.LOC104800472 Tarenaya hassleriana HOM05D004132 ORTHO05D006273 1.2e-44 183.3 116 75.0
TWI59G0283 Tripterygium wilfordii HOM05D004132 ORTHO05D006273 1.2e-44 183.3 121 73.6
arahy.Tifrunner.gnm1.ann1.KJS3LB Arachis hypogaea HOM05D004132 ORTHO05D006273 1.5e-44 183.0 115 74.8
arahy.Tifrunner.gnm1.ann1.L32XPY Arachis hypogaea HOM05D004132 ORTHO05D006273 1.5e-44 183.0 115 74.8
TPR.G28546 Trifolium pratense HOM05D004132 ORTHO05D006273 1.5e-44 183.0 121 71.9
GSVIVG01020335001 Vitis vinifera HOM05D004132 ORTHO05D006273 1.5e-44 183.0 116 76.7
Eucgr.C02274 Eucalyptus grandis HOM05D004132 ORTHO05D006273 2.0e-44 182.6 121 72.7
MELO3C007024.2 Cucumis melo HOM05D004132 ORTHO05D006273 3.4e-44 181.8 121 72.7
CsaV3_6G052840 Cucumis sativus L. HOM05D004132 ORTHO05D006273 3.4e-44 181.8 121 72.7
Hma1.2p1_0325F.1_g126090 Hydrangea macrophylla HOM05D004132 ORTHO05D006273 3.4e-44 181.8 115 74.8
CDE05G2803 Ceratophyllum demersum HOM05D004132 ORTHO05D006273 4.4e-44 181.4 121 72.7
Ca_06096_v3 Cicer arietinum L. HOM05D004132 ORTHO05D006273 4.4e-44 181.4 121 71.1
GSVIVG01020347001 Vitis vinifera HOM05D004132 ORTHO05D006273 4.4e-44 181.4 116 75.9
Psat3g096280 Pisum sativum HOM05D004132 ORTHO05D006273 5.8e-44 181.0 121 71.1
PGR102G2051 Punica granatum HOM05D004132 ORTHO05D006273 5.8e-44 181.0 121 71.9
Nitab4.5_0004719g0050 Nicotiana tabacum HOM05D004132 ORTHO05D006273 7.5e-44 180.6 107 79.4
ATR0215G010 Amborella trichopoda HOM05D004132 ORTHO05D006273 9.8e-44 180.3 121 72.7
CSS0033836 Camellia sinensis var. sinensis HOM05D004132 ORTHO05D018840 9.8e-44 180.3 113 76.1
CDE05G2281 Ceratophyllum demersum HOM05D004132 ORTHO05D006273 1.3e-43 179.9 121 71.9
HanXRQChr12g0367151 Helianthus annuus HOM05D004132 ORTHO05D006273 1.3e-43 179.9 121 71.9
Phvul.008G010100 Phaseolus vulgaris HOM05D004132 ORTHO05D006273 1.7e-43 179.5 121 71.1
Medtr7g083030 Medicago truncatula HOM05D004132 ORTHO05D006273 2.2e-43 179.1 121 71.1
ECA232G2283 Erigeron canadensis HOM05D004132 ORTHO05D006273 2.9e-43 178.7 121 71.1
Lj5g0016492 Lotus japonicus HOM05D004132 ORTHO05D006273 2.9e-43 178.7 121 71.1
Lj6g0002780 Lotus japonicus HOM05D004132 ORTHO05D006273 2.9e-43 178.7 121 71.1
Lalb_Chr17g0336121 Lupinus albus HOM05D004132 ORTHO05D006273 4.9e-43 177.9 121 69.4
Os12g0533700 Oryza sativa ssp. japonica HOM05D004132 ORTHO05D006273 1.1e-42 176.8 121 71.1
Lj1g0015918 Lotus japonicus HOM05D004132 ORTHO05D006273 1.9e-42 176.0 116 73.3
Hund00133 Selenicereus undatus HOM05D004132 ORTHO05D006273 1.9e-42 176.0 121 71.1
SEGI_05248 Sequoiadendron giganteum HOM05D004132 ORTHO05D006273 1.9e-42 176.0 121 70.2
Lsat_1_v5_gn_8_118000 Lactuca sativa HOM05D004132 ORTHO05D006273 2.4e-42 175.6 121 70.2
AT3G58140 Arabidopsis thaliana HOM05D004132 ORTHO05D006273 3.2e-42 175.3 115 73.9
Glyma.18G291800 Glycine max HOM05D004132 ORTHO05D006273 3.2e-42 175.3 121 69.4
AL5G39830 Arabidopsis lyrata HOM05D004132 ORTHO05D006273 4.1e-42 174.9 115 73.9
A07p23930 Brassica napus HOM05D004132 ORTHO05D006273 4.1e-42 174.9 121 71.1
Aqoxy2G02279 Aquilegia oxysepala HOM05D004132 ORTHO05D006273 5.4e-42 174.5 121 68.6
Aqoxy7G00307 Aquilegia oxysepala HOM05D004132 ORTHO05D006273 5.4e-42 174.5 121 68.6
BcaB02g07547 Brassica carinata HOM05D004132 ORTHO05D006273 5.4e-42 174.5 121 71.1
BcaC08g44901 Brassica carinata HOM05D004132 ORTHO05D006273 5.4e-42 174.5 121 71.1
C06p25160 Brassica napus HOM05D004132 ORTHO05D006273 5.4e-42 174.5 121 71.1
C08p33670 Brassica napus HOM05D004132 ORTHO05D006273 5.4e-42 174.5 121 71.1
BolC6t37674H Brassica oleracea HOM05D004132 ORTHO05D006273 5.4e-42 174.5 121 71.1
Aa31LG10G12860 Aethionema arabicum HOM05D004132 ORTHO05D006273 7.0e-42 174.1 116 73.3
BcaC07g40275 Brassica carinata HOM05D004132 ORTHO05D006273 7.0e-42 174.1 121 71.1
BolC8t50964H Brassica oleracea HOM05D004132 ORTHO05D006273 7.0e-42 174.1 121 71.1
BraA07t30044Z Brassica rapa HOM05D004132 ORTHO05D006273 7.0e-42 174.1 121 71.1
Carub.0005s2499 Capsella rubella HOM05D004132 ORTHO05D006273 7.0e-42 174.1 115 73.9
CBR_g19753 Chara braunii HOM05D004132 ORTHO05D006273 9.2e-42 173.7 110 73.6
Thhalv10005992m.g Eutrema salsugineum HOM05D004132 ORTHO05D006273 1.2e-41 173.3 116 73.3
Zm00001eb153980 Zea mays HOM05D004132 ORTHO05D006273 1.2e-41 173.3 121 68.6
Zm00001eb371320 Zea mays HOM05D004132 ORTHO05D006273 1.6e-41 172.9 121 68.6
Glyma.02G091300 Glycine max HOM05D004132 ORTHO05D006273 2.0e-41 172.6 121 67.8
A09p50920 Brassica napus HOM05D004132 ORTHO05D006273 2.7e-41 172.2 121 70.2
BraA09t40538Z Brassica rapa HOM05D004132 ORTHO05D006273 2.7e-41 172.2 121 70.2
Hma1.2p1_0634F.1_g192870 Hydrangea macrophylla HOM05D004132 ORTHO05D018840 2.7e-41 172.2 108 75.9
Pp3c5_15740 Physcomitrium patens HOM05D004132 ORTHO05D006273 3.5e-41 171.8 122 67.2
Sp5g04580 Schrenkiella parvula HOM05D004132 ORTHO05D006273 6.0e-41 171.0 121 70.2
Ciclev10011787m.g Citrus clementina HOM05D004132 ORTHO05D006273 7.8e-41 170.6 121 68.6
BcaC07g40186 Brassica carinata HOM05D004132 ORTHO05D006273 1.0e-40 170.2 121 70.2
CARHR168500 Cardamine hirsuta HOM05D004132 ORTHO05D006273 1.0e-40 170.2 110 74.5
AagrBONN_evm.TU.Sc2ySwM_344.2605 Anthoceros agrestis HOM05D004132 ORTHO05D006273 1.7e-40 169.5 121 66.1
Sed0008608 Sechium edule HOM05D004132 ORTHO05D006273 2.3e-40 169.1 107 74.8
Cre02.g079600 Chlamydomonas reinhardtii HOM05D004132 ORTHO05D006273 1.5e-39 166.4 121 68.6
HPP92_026254 Vanilla planifolia HOM05D004132 ORTHO05D006273 3.3e-39 165.2 113 69.9
Rhsim01G0214100 Rhododendron simsii HOM05D004132 ORTHO05D018840 5.6e-39 164.5 108 72.2
Rhsim08G0147200 Rhododendron simsii HOM05D004132 ORTHO05D018840 1.6e-38 162.9 102 73.5
Mapoly0072s0003 Marchantia polymorpha HOM05D004132 ORTHO05D006273 2.1e-38 162.5 121 65.3
SMO361G0681 Selaginella moellendorffii HOM05D004132 ORTHO05D006273 4.7e-38 161.4 121 62.8
Eucgr.C02393 Eucalyptus grandis HOM05D004132 ORTHO05D006273 1.1e-37 160.2 103 72.8
PRCOL_00002437 Prasinoderma coloniale HOM05D004132 ORTHO05D006273 5.8e-36 154.5 117 63.2
MCO13G295 Micromonas commoda HOM05D004132 ORTHO05D006273 8.3e-35 150.6 116 62.1
AUR62010256 Chenopodium quinoa HOM05D004132 ORTHO05D006273 1.2e-30 136.7 119 58.8
FAN21G3660 Fragaria x ananassa HOM05D004132 ORTHO05D035098 5.8e-28 127.9 75 78.7
GSVIVG01020319001 Vitis vinifera HOM05D004132 ORTHO05D035098 2.4e-26 122.5 68 82.4
ECA233G2583 Erigeron canadensis HOM05D004132 ORTHO05D006273 1.1e-23 113.6 110 53.6
GSVIVG01020339001 Vitis vinifera HOM05D004132 ORTHO05D006273 7.3e-23 110.9 67 76.1
Rhsim02G0198900 Rhododendron simsii HOM05D004132 ORTHO05D018840 1.6e-22 109.8 102 57.8
Dinv25394 Davidia involucrata HOM05D004132 ORTHO05D006273 7.6e-20 100.9 55 85.5
Rhsim06G0102600 Rhododendron simsii HOM05D004132 ORTHO05D018840 1.7e-19 99.8 69 68.1
Cfa022583 Carpinus fangiana HOM05D004132 ORTHO05D006273 2.8e-14 82.4 104 39.4
Haze_26151 Corylus avellana HOM05D004132 ORTHO05D006273 3.6e-14 82.0 133 34.6
Hma1.2p1_0666F.1_g199485 Hydrangea macrophylla HOM05D004132 ORTHO05D006273 5.3e-13 78.2 42 81.0
GSVIVG01012128001 Vitis vinifera HOM05D004132 ORTHO05D006273 7.1e-10 67.8 104 44.2
HanXRQChr09g0260411 Helianthus annuus HOM05D004132 ORTHO05D006273 5.6e-07 58.2 39 66.7


User provided reference genes

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