Gene: AT3G58140

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G58140
  • Transcript Identifier AT3G58140.1
  • Gene Type Coding gene
  • Location Chr3 : 21529988-21532386 : negative

Gene Family Information

  • ID HOM05D004132
  • #Genes/#Species 171/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G58140.1
  • uniprot Q94K73

Descriptions

  • Description phenylalanyl-tRNA synthetase class IIc family protein
  • Computational description phenylalanyl-tRNA synthetase class IIc family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA processing, phenylalanyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, mitochondrial (InterPro:IPR004530), Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding (InterPro:IPR005121), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative (TAIR:AT4G39280.1); Has 12112 Blast hits to 12078 proteins in 3125 species: Archae - 246; Bacteria - 7816; Metazoa - 323; Fungi - 290; Plants - 111; Viruses - 0; Other Eukaryotes - 3326 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043039
IEA
GOA DatabasetRNA aminoacylation
GO:0043039
IEA
InterProtRNA aminoacylation
GO:0006432
IEA
GOA Databasephenylalanyl-tRNA aminoacylation
GO:0006432
IBA
Gene Ontologyphenylalanyl-tRNA aminoacylation1
GO:0006432
IEA
InterProphenylalanyl-tRNA aminoacylation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0016874
IEA
GOA Databaseligase activity
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004826
IEA
GOA Databasephenylalanine-tRNA ligase activity
GO:0004826
IBA
Gene Ontologyphenylalanine-tRNA ligase activity1
GO:0004826
IEA
InterProphenylalanine-tRNA ligase activity
GO:0000049
IEA
Gene OntologytRNA binding
GO:0000049
IEA
InterProtRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA, HDA
ISM
Gene Ontologychloroplast2 3
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0005737
IEA
InterProcytoplasm
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA
IBA
Gene Ontologymitochondrion1 2
GO:0009570
IDA
IEA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma4
GO:0005829
HDA
Gene Ontologycytosol5
GO:0005759
IEA
GOA Databasemitochondrial matrix
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily
IPR004530 Phenylalanyl-tRNA synthetase, class IIc, mitochondrial
IPR005121 Ferrodoxin-fold anticodon-binding domain
IPR002319 Phenylalanyl-tRNA synthetase
Mapman id Description
17.2.15 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase