Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048459.1 Olea europaea HOM05D001533 ORTHO05D005122 2.1e-147 525.8 280 100.0
Oeu005320.1 Olea europaea HOM05D001533 ORTHO05D005122 2.9e-101 372.5 231 86.6
Hma1.2p1_2281F.1_g318810 Hydrangea macrophylla HOM05D001533 ORTHO05D005122 5.1e-90 335.1 286 67.1
Cfa006964 Carpinus fangiana HOM05D001533 ORTHO05D005122 8.8e-90 334.3 317 63.7
QL06p033501 Quercus lobata HOM05D001533 ORTHO05D005122 2.0e-89 333.2 317 62.1
Peaxi162Scf00083g00714 Petunia axillaris HOM05D001533 ORTHO05D005122 1.7e-88 330.1 315 61.6
Cc00_g26600 Coffea canephora HOM05D001533 ORTHO05D005122 2.2e-88 329.7 315 61.6
Haze_03774 Corylus avellana HOM05D001533 ORTHO05D005122 1.4e-87 327.0 317 62.5
Actinidia31002 Actinidia chinensis HOM05D001533 ORTHO05D005122 4.1e-87 325.5 312 60.6
CiPaw.07G057700 Carya illinoinensis HOM05D001533 ORTHO05D005122 5.3e-87 325.1 317 61.8
RcHm_v2.0_Chr2g0099581 Rosa chinensis HOM05D001533 ORTHO05D005122 5.3e-87 325.1 317 61.8
CAN.G1671.6 Capsicum annuum HOM05D001533 ORTHO05D005122 9.1e-87 324.3 315 59.7
Prupe.7G167200 Prunus persica HOM05D001533 ORTHO05D005122 9.1e-87 324.3 317 61.2
Nn6g32353 Nelumbo nucifera HOM05D001533 ORTHO05D005122 1.2e-86 323.9 314 61.5
Ciclev10025997m.g Citrus clementina HOM05D001533 ORTHO05D005122 2.0e-86 323.2 317 61.8
Rhsim08G0034200 Rhododendron simsii HOM05D001533 ORTHO05D005122 2.6e-86 322.8 278 65.8
MD02G1133400 Malus domestica HOM05D001533 ORTHO05D005122 3.4e-86 322.4 317 60.9
vmacro18418 Vaccinium macrocarpon HOM05D001533 ORTHO05D005122 7.7e-86 321.2 286 64.3
Cpa.g.sc6.238 Carica papaya HOM05D001533 ORTHO05D005122 1.7e-85 320.1 317 60.9
Nitab4.5_0006286g0040 Nicotiana tabacum HOM05D001533 ORTHO05D005122 2.2e-85 319.7 283 64.7
Lj4g0002557 Lotus japonicus HOM05D001533 ORTHO05D005122 3.8e-85 318.9 317 59.3
FAN19G0503 Fragaria x ananassa HOM05D001533 ORTHO05D005122 5.0e-85 318.5 314 61.1
Manes.01G145100 Manihot esculenta HOM05D001533 ORTHO05D005122 5.0e-85 318.5 317 60.9
FvH4_1g11960 Fragaria vesca HOM05D001533 ORTHO05D005122 8.5e-85 317.8 314 60.8
TWI53G2031 Tripterygium wilfordii HOM05D001533 ORTHO05D005122 1.1e-84 317.4 317 59.9
Solyc02g083990.3 Solanum lycopersicum HOM05D001533 ORTHO05D005122 1.9e-84 316.6 286 62.6
FAN28G1062 Fragaria x ananassa HOM05D001533 ORTHO05D005122 2.5e-84 316.2 314 60.5
FAN23G2041 Fragaria x ananassa HOM05D001533 ORTHO05D005122 3.2e-84 315.8 314 60.5
FAN26G0519 Fragaria x ananassa HOM05D001533 ORTHO05D005122 7.2e-84 314.7 314 60.2
Sopen02g028790 Solanum pennellii HOM05D001533 ORTHO05D005122 9.4e-84 314.3 286 62.2
TWI09G0584 Tripterygium wilfordii HOM05D001533 ORTHO05D005122 2.1e-83 313.2 317 59.6
CiPaw.08G132200 Carya illinoinensis HOM05D001533 ORTHO05D005122 7.9e-83 311.2 317 58.7
TAR381G0830 Trochodendron aralioides HOM05D001533 ORTHO05D005122 1.0e-82 310.8 315 58.4
CAN.G893.6 Capsicum annuum HOM05D001533 ORTHO05D005122 1.4e-82 310.5 315 57.8
Glyma.01G166700 Glycine max HOM05D001533 ORTHO05D005122 1.8e-82 310.1 315 57.1
Sabra05G0094600 Salix brachista HOM05D001533 ORTHO05D005122 2.3e-82 309.7 277 63.9
ClCG07G008590 Citrullus lanatus HOM05D001533 ORTHO05D005122 3.0e-82 309.3 317 58.4
Thecc.01G020200 Theobroma cacao HOM05D001533 ORTHO05D005122 3.0e-82 309.3 317 59.6
MELO3C016393.2 Cucumis melo HOM05D001533 ORTHO05D005122 5.1e-82 308.5 317 58.4
Ca_22369_v3 Cicer arietinum L. HOM05D001533 ORTHO05D005122 8.8e-82 307.8 277 63.9
COL.COLO4_21923 Corchorus olitorius HOM05D001533 ORTHO05D005122 1.5e-81 307.0 310 60.3
Solyc03g033580.3 Solanum lycopersicum HOM05D001533 ORTHO05D005122 9.7e-81 304.3 315 57.5
CsaV3_4G005560 Cucumis sativus L. HOM05D001533 ORTHO05D005122 1.3e-80 303.9 317 57.7
Potri.005G115500 Populus trichocarpa HOM05D001533 ORTHO05D005122 1.3e-80 303.9 308 58.8
Phvul.002G109200 Phaseolus vulgaris HOM05D001533 ORTHO05D005122 3.7e-80 302.4 315 56.2
Lj2g0008453 Lotus japonicus HOM05D001533 ORTHO05D005122 1.4e-79 300.4 315 55.9
Sopen03g006360 Solanum pennellii HOM05D001533 ORTHO05D005122 1.4e-79 300.4 315 56.8
Sed0027203 Sechium edule HOM05D001533 ORTHO05D005122 1.8e-79 300.1 317 56.8
VMungo1215G1138 Vigna mungo HOM05D001533 ORTHO05D005122 1.8e-79 300.1 286 59.8
Dinv33621 Davidia involucrata HOM05D001533 ORTHO05D005122 2.4e-79 299.7 269 63.6
Potri.007G012600 Populus trichocarpa HOM05D001533 ORTHO05D005122 5.3e-79 298.5 311 57.6
Glyma.02G049100 Glycine max HOM05D001533 ORTHO05D005122 9.1e-79 297.7 271 62.7
Oeu035307.1 Olea europaea HOM05D001533 ORTHO05D005122 1.2e-78 297.4 261 67.0
arahy.Tifrunner.gnm1.ann1.JA3WP2 Arachis hypogaea HOM05D001533 ORTHO05D005122 2.6e-78 296.2 286 59.8
CSS0008566 Camellia sinensis var. sinensis HOM05D001533 ORTHO05D005122 3.5e-78 295.8 289 61.2
Hma1.2p1_0743F.1_g211570 Hydrangea macrophylla HOM05D001533 ORTHO05D005122 3.5e-78 295.8 262 64.9
PSO170G0469 Papaver somniferum HOM05D001533 ORTHO05D005122 4.5e-78 295.4 308 57.1
Nitab4.5_0001959g0020 Nicotiana tabacum HOM05D001533 ORTHO05D005122 7.7e-78 294.7 286 60.8
PGSC0003DMG400003635 Solanum tuberosum HOM05D001533 ORTHO05D005122 7.7e-78 294.7 285 60.0
SGA_v2.0_scaffold137G35090 Striga asiatica HOM05D001533 ORTHO05D005122 1.0e-77 294.3 268 62.7
Duzib187G1725 Durio zibethinus HOM05D001533 ORTHO05D005122 3.8e-77 292.4 315 57.1
PSO700G0386 Papaver somniferum HOM05D001533 ORTHO05D005122 6.5e-77 291.6 308 56.2
TPR.G30063 Trifolium pratense HOM05D001533 ORTHO05D005122 1.5e-76 290.4 315 55.6
VMungo0251G1454 Vigna mungo HOM05D001533 ORTHO05D005122 1.9e-76 290.0 309 55.7
SalBow3G3323 Salvia bowleyana HOM05D001533 ORTHO05D005122 3.2e-76 289.3 263 64.3
Nitab4.5_0000438g0040 Nicotiana tabacum HOM05D001533 ORTHO05D005122 5.5e-76 288.5 289 58.1
Peaxi162Scf00034g00264 Petunia axillaris HOM05D001533 ORTHO05D005122 2.7e-75 286.2 268 61.6
Glyma.16G129200 Glycine max HOM05D001533 ORTHO05D005122 2.3e-74 283.1 266 60.5
Phvul.003G262700 Phaseolus vulgaris HOM05D001533 ORTHO05D005122 1.1e-73 280.8 309 54.7
Lalb_Chr09g0321781 Lupinus albus HOM05D001533 ORTHO05D005122 2.8e-72 276.2 301 54.8
MSTRG.2705 Avicennia marina HOM05D001533 ORTHO05D005122 4.8e-72 275.4 242 65.3
Nitab4.5_0006119g0010 Nicotiana tabacum HOM05D001533 ORTHO05D005122 8.2e-72 274.6 262 59.9
CSS0030027 Camellia sinensis var. sinensis HOM05D001533 ORTHO05D005122 1.8e-71 273.5 315 54.3
Manes.02G103600 Manihot esculenta HOM05D001533 ORTHO05D005122 5.3e-71 271.9 265 60.8
CANSAT80G2154 Cannabis sativa HOM05D001533 ORTHO05D005122 5.9e-70 268.5 310 53.2
Glyma.11G076600 Glycine max HOM05D001533 ORTHO05D005122 2.9e-69 266.2 305 53.4
Gorai.003G010300 Gossypium raimondii HOM05D001533 ORTHO05D005122 5.0e-69 265.4 261 59.8
Os06g0715400 Oryza sativa ssp. japonica HOM05D001533 ORTHO05D005122 8.5e-69 264.6 267 56.2
GSVIVG01018794001 Vitis vinifera HOM05D001533 ORTHO05D005122 1.5e-68 263.8 230 65.2
Gohir.A02G170000 Gossypium hirsutum HOM05D001533 ORTHO05D005122 1.9e-68 263.5 261 59.4
Lj2C466T13 Lonicera japonica HOM05D001533 ORTHO05D005122 1.2e-67 260.8 290 54.8
Atru.chr3.790 Acer truncatum HOM05D001533 ORTHO05D005122 3.6e-67 259.2 261 59.4
DCAR_016613 Daucus carota HOM05D001533 ORTHO05D005122 3.6e-67 259.2 263 58.6
Hund16484 Selenicereus undatus HOM05D001533 ORTHO05D005122 4.0e-66 255.8 262 56.5
Zm00001eb228040 Zea mays HOM05D001533 ORTHO05D005122 5.2e-66 255.4 268 55.6
Eucgr.J02426 Eucalyptus grandis HOM05D001533 ORTHO05D005122 2.0e-65 253.4 287 55.4
Lj4C217T16 Lonicera japonica HOM05D001533 ORTHO05D005122 2.6e-65 253.1 273 57.1
Lalb_Chr05g0229891 Lupinus albus HOM05D001533 ORTHO05D005122 3.4e-65 252.7 257 57.6
Sp3g31420 Schrenkiella parvula HOM05D001533 ORTHO05D005122 3.4e-65 252.7 306 50.0
arahy.Tifrunner.gnm1.ann1.H1V2NS Arachis hypogaea HOM05D001533 ORTHO05D005122 1.7e-64 250.4 248 57.7
AUR62043756 Chenopodium quinoa HOM05D001533 ORTHO05D005122 1.7e-64 250.4 261 56.3
AUR62044201 Chenopodium quinoa HOM05D001533 ORTHO05D005122 1.7e-64 250.4 261 56.3
THA.LOC104804260 Tarenaya hassleriana HOM05D001533 ORTHO05D005122 4.8e-64 248.8 302 50.3
Duzib264G0112 Durio zibethinus HOM05D001533 ORTHO05D005122 8.3e-64 248.1 251 58.6
Gohir.A11G176200 Gossypium hirsutum HOM05D001533 ORTHO05D005122 1.4e-63 247.3 260 57.3
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 1.8e-63 246.9 291 54.0
Gohir.D03G010000 Gossypium hirsutum HOM05D001533 ORTHO05D005122 3.1e-63 246.1 250 58.4
AUR62007522 Chenopodium quinoa HOM05D001533 ORTHO05D005122 5.4e-63 245.4 261 55.2
PGR119G1411 Punica granatum HOM05D001533 ORTHO05D005122 1.2e-62 244.2 252 56.7
Gorai.007G195800 Gossypium raimondii HOM05D001533 ORTHO05D005122 1.6e-62 243.8 250 58.8
THA.LOC104807492 Tarenaya hassleriana HOM05D001533 ORTHO05D005122 4.5e-62 242.3 317 47.6
Nn5g29330 Nelumbo nucifera HOM05D001533 ORTHO05D005122 1.7e-61 240.4 241 58.9
Gohir.D11G183900 Gossypium hirsutum HOM05D001533 ORTHO05D005122 2.2e-61 240.0 250 58.4
AT2G17990 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 5.0e-61 238.8 289 49.1
TAR628G0959 Trochodendron aralioides HOM05D001533 ORTHO05D005122 6.5e-61 238.4 241 57.3
AL3G51060 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 1.5e-60 237.3 288 49.3
Aa31LG1G14750 Aethionema arabicum HOM05D001533 ORTHO05D005122 1.9e-60 236.9 316 47.2
CARHR108480 Cardamine hirsuta HOM05D001533 ORTHO05D005122 2.5e-60 236.5 279 50.9
Duzib147G0876 Durio zibethinus HOM05D001533 ORTHO05D005122 7.2e-60 235.0 253 56.5
EL10As8g23833 Beta vulgaris HOM05D001533 ORTHO05D005122 3.0e-58 229.6 287 48.8
Carub.0003s3213 Capsella rubella HOM05D001533 ORTHO05D005122 1.5e-57 227.3 286 48.3
Thhalv10022777m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 5.7e-57 225.3 277 51.3
BcaB08g34783 Brassica carinata HOM05D001533 ORTHO05D005122 2.2e-56 223.4 245 53.9
Thhalv10004494m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 2.8e-56 223.0 276 49.3
Aa31LG8G15170 Aethionema arabicum HOM05D001533 ORTHO05D005122 3.7e-56 222.6 288 48.6
CANSAT01G1879 Cannabis sativa HOM05D001533 ORTHO05D005122 8.3e-56 221.5 253 53.0
Aqoxy6G02302 Aquilegia oxysepala HOM05D001533 ORTHO05D005122 1.4e-55 220.7 315 47.3
C07p04980 Brassica napus HOM05D001533 ORTHO05D005122 2.4e-55 219.9 269 49.4
A07p02680 Brassica napus HOM05D001533 ORTHO05D005122 3.1e-55 219.5 271 50.2
BraA07t28064Z Brassica rapa HOM05D001533 ORTHO05D005122 3.1e-55 219.5 271 50.2
Ah.02g124450 Amaranthus hybridus HOM05D001533 ORTHO05D005122 4.1e-55 219.2 260 52.3
BolC7t40899H Brassica oleracea HOM05D001533 ORTHO05D005122 5.4e-55 218.8 240 52.9
BcaC06g36351 Brassica carinata HOM05D001533 ORTHO05D005122 2.0e-54 216.9 269 48.7
ECA246G3074 Erigeron canadensis HOM05D001533 ORTHO05D005122 2.0e-54 216.9 244 53.7
Lalb_Chr16g0377521 Lupinus albus HOM05D001533 ORTHO05D005122 2.0e-54 216.9 236 55.5
MBI05_g43883_MAGBIO Magnolia biondii HOM05D001533 ORTHO05D005122 2.3e-53 213.4 229 55.5
AL8G45270 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 6.6e-53 211.8 287 48.4
Sp2g30440 Schrenkiella parvula HOM05D001533 ORTHO05D005122 9.5e-52 208.0 258 50.4
AT5G66250 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 1.6e-51 207.2 292 47.9
Psat4g098560 Pisum sativum HOM05D001533 ORTHO05D005122 1.4e-50 204.1 227 53.7
BolC3t18147H Brassica oleracea HOM05D001533 ORTHO05D005122 3.0e-50 203.0 269 49.1
BraA06t26280Z Brassica rapa HOM05D001533 ORTHO05D005122 4.0e-50 202.6 277 47.7
A06p33470 Brassica napus HOM05D001533 ORTHO05D005122 8.9e-50 201.4 277 47.3
BolC9t54085H Brassica oleracea HOM05D001533 ORTHO05D005122 7.5e-49 198.4 218 55.0
Carub.0008s2824 Capsella rubella HOM05D001533 ORTHO05D005122 1.7e-48 197.2 288 46.9
AL6G43540 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 2.2e-48 196.8 270 47.8
CARHR281470 Cardamine hirsuta HOM05D001533 ORTHO05D005122 2.9e-48 196.4 212 56.1
C09p11970 Brassica napus HOM05D001533 ORTHO05D005122 4.9e-48 195.7 232 53.0
BcaNung04499 Brassica carinata HOM05D001533 ORTHO05D005122 8.3e-48 194.9 207 56.0
BraA09t36653Z Brassica rapa HOM05D001533 ORTHO05D005122 1.1e-47 194.5 239 51.9
C03p58890 Brassica napus HOM05D001533 ORTHO05D005122 1.2e-46 191.0 259 48.6
A09p10100 Brassica napus HOM05D001533 ORTHO05D005122 4.6e-46 189.1 236 50.4
AagrBONN_evm.TU.Sc2ySwM_228.4945 Anthoceros agrestis HOM05D001533 ORTHO05D005122 2.1e-43 180.3 322 38.8
BcaNung04495 Brassica carinata HOM05D001533 ORTHO05D005122 2.1e-43 180.3 218 50.9
Sc16g0002080 Simmondsia chinensis HOM05D001533 ORTHO05D005122 6.1e-43 178.7 239 48.1
Aa31LG6G13050 Aethionema arabicum HOM05D001533 ORTHO05D005122 1.8e-42 177.2 262 43.9
Lsat_1_v5_gn_4_146821 Lactuca sativa HOM05D001533 ORTHO05D005122 5.2e-42 175.6 219 50.2
Lsat_1_v5_gn_4_146800 Lactuca sativa HOM05D001533 ORTHO05D005122 8.9e-42 174.9 219 50.2
Thhalv10025665m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 9.8e-41 171.4 256 42.2
Medtr8g076020 Medicago truncatula HOM05D001533 ORTHO05D005122 3.7e-40 169.5 225 48.9
CDE04G1263 Ceratophyllum demersum HOM05D001533 ORTHO05D005122 1.4e-39 167.5 241 42.7
Sp7g33880 Schrenkiella parvula HOM05D001533 ORTHO05D005122 2.4e-39 166.8 247 44.1
CDE02G4489 Ceratophyllum demersum HOM05D001533 ORTHO05D005122 9.2e-39 164.9 242 43.8
SMO358G0186 Selaginella moellendorffii HOM05D001533 ORTHO05D005122 9.5e-36 154.8 238 39.9
Carub.0007s0413 Capsella rubella HOM05D001533 ORTHO05D005122 6.2e-35 152.1 241 40.7
HPP92_007128 Vanilla planifolia HOM05D001533 ORTHO05D005122 2.3e-34 150.2 146 61.0
ATR0680G362 Amborella trichopoda HOM05D001533 ORTHO05D005122 1.7e-32 144.1 276 37.3
HanXRQChr16g0531321 Helianthus annuus HOM05D001533 ORTHO05D005122 2.1e-30 137.1 192 45.3
SEGI_32707 Sequoiadendron giganteum HOM05D001533 ORTHO05D005122 6.6e-29 132.1 308 32.5
MD15G1246600 Malus domestica HOM05D001533 ORTHO05D005122 1.6e-27 127.5 110 69.1
unitig_899.g14709 Utricularia gibba HOM05D001533 ORTHO05D000063 3.2e-23 113.2 90 65.6
C01p02930 Brassica napus HOM05D001533 ORTHO05D024397 7.1e-23 112.1 202 39.1
A01p02640 Brassica napus HOM05D001533 ORTHO05D024397 1.2e-22 111.3 201 40.3
BraA01t00250Z Brassica rapa HOM05D001533 ORTHO05D024397 1.2e-22 111.3 201 40.3
BolC1t00279H Brassica oleracea HOM05D001533 ORTHO05D024397 8.6e-21 105.1 235 35.7
unitig_699.g19710 Utricularia gibba HOM05D001533 ORTHO05D005122 8.6e-21 105.1 107 58.9
AT4G36105 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 4.3e-20 102.8 207 39.1
AUR62043805 Chenopodium quinoa HOM05D001533 ORTHO05D005122 1.2e-17 94.7 88 60.2
CARHR244500 Cardamine hirsuta HOM05D001533 ORTHO05D005122 1.3e-16 91.3 256 32.8
BcaNung00764 Brassica carinata HOM05D001533 ORTHO05D024397 7.8e-14 82.0 155 37.4


User provided reference genes

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