Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047331.1 Olea europaea HOM05D001969 ORTHO05D009003 3.9e-54 214.9 141 100.0
MSTRG.23988 Avicennia marina HOM05D001969 ORTHO05D009003 3.9e-38 161.8 141 76.6
Nitab4.5_0006575g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 1.9e-37 159.5 135 79.3
Nitab4.5_0003069g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 9.6e-37 157.1 135 77.8
Cc11_g01780 Coffea canephora HOM05D001969 ORTHO05D009003 6.9e-35 151.0 136 77.2
Cc11_g01770 Coffea canephora HOM05D001969 ORTHO05D009003 9.0e-35 150.6 140 75.0
CSS0025708 Camellia sinensis var. sinensis HOM05D001969 ORTHO05D009003 1.2e-34 150.2 138 72.5
HanXRQChr09g0274351 Helianthus annuus HOM05D001969 ORTHO05D009003 2.6e-34 149.1 141 73.0
HanXRQChr11g0350221 Helianthus annuus HOM05D001969 ORTHO05D009003 3.4e-34 148.7 141 73.0
DCAR_011200 Daucus carota HOM05D001969 ORTHO05D009003 1.7e-33 146.4 133 51.9
TAR627G0343 Trochodendron aralioides HOM05D001969 ORTHO05D009003 1.7e-33 146.4 139 73.4
TAR627G0582 Trochodendron aralioides HOM05D001969 ORTHO05D009003 1.7e-33 146.4 139 73.4
vmacro09267 Vaccinium macrocarpon HOM05D001969 ORTHO05D009003 2.2e-33 146.0 132 73.5
ECA236G1367 Erigeron canadensis HOM05D001969 ORTHO05D009003 2.9e-33 145.6 141 68.8
SalBow7G2523 Salvia bowleyana HOM05D001969 ORTHO05D009003 2.9e-33 145.6 141 70.9
ECA233G3782 Erigeron canadensis HOM05D001969 ORTHO05D009003 3.8e-33 145.2 141 68.1
Migut.H00150 Erythranthe guttata HOM05D001969 ORTHO05D009003 3.8e-33 145.2 136 69.9
Thecc.02G172900 Theobroma cacao HOM05D001969 ORTHO05D009003 5.0e-33 144.8 136 72.1
Nitab4.5_0002260g0270 Nicotiana tabacum HOM05D001969 ORTHO05D009003 6.5e-33 144.4 135 75.6
Lju41E32T0 Lonicera japonica HOM05D001969 ORTHO05D009003 8.5e-33 144.1 88 76.1
SalBow1G0343 Salvia bowleyana HOM05D001969 ORTHO05D009003 8.5e-33 144.1 134 72.4
SalBow7G4035 Salvia bowleyana HOM05D001969 ORTHO05D009003 8.5e-33 144.1 134 72.4
Dinv23700 Davidia involucrata HOM05D001969 ORTHO05D009003 1.1e-32 143.7 133 69.9
Solyc07g064840.3 Solanum lycopersicum HOM05D001969 ORTHO05D009003 1.1e-32 143.7 131 74.0
HanXRQChr06g0167021 Helianthus annuus HOM05D001969 ORTHO05D009003 1.4e-32 143.3 141 70.9
Sopen07g033040 Solanum pennellii HOM05D001969 ORTHO05D009003 1.9e-32 142.9 131 73.3
SGA_v2.0_scaffold135G34841 Striga asiatica HOM05D001969 ORTHO05D009003 1.9e-32 142.9 138 71.7
COL.COLO4_13690 Corchorus olitorius HOM05D001969 ORTHO05D009003 2.5e-32 142.5 136 71.3
Peaxi162Scf00423g00066 Petunia axillaris HOM05D001969 ORTHO05D009003 2.5e-32 142.5 135 72.6
TAR629G1647 Trochodendron aralioides HOM05D001969 ORTHO05D009003 2.5e-32 142.5 136 71.3
Lsat_1_v5_gn_3_137700 Lactuca sativa HOM05D001969 ORTHO05D009003 7.2e-32 141.0 138 60.9
Nitab4.5_0003358g0010 Nicotiana tabacum HOM05D001969 ORTHO05D009003 9.3e-32 140.6 135 73.3
CAN.G1310.15 Capsicum annuum HOM05D001969 ORTHO05D009003 1.6e-31 139.8 136 71.3
PGSC0003DMG400022306 Solanum tuberosum HOM05D001969 ORTHO05D009003 1.6e-31 139.8 136 69.9
SGA_v2.0_scaffold3G01553 Striga asiatica HOM05D001969 ORTHO05D009003 2.1e-31 139.4 135 71.1
Rhsim04G0021700 Rhododendron simsii HOM05D001969 ORTHO05D009003 2.7e-31 139.0 131 74.0
Actinidia39300 Actinidia chinensis HOM05D001969 ORTHO05D009003 4.6e-31 138.3 141 70.2
Atru.chr6.3054 Acer truncatum HOM05D001969 ORTHO05D009003 6.1e-31 137.9 135 68.9
CANSAT78G0375 Cannabis sativa HOM05D001969 ORTHO05D003463 6.1e-31 137.9 128 72.7
Nn1g06730 Nelumbo nucifera HOM05D001969 ORTHO05D009003 6.1e-31 137.9 136 61.8
CAN.G1720.5 Capsicum annuum HOM05D001969 ORTHO05D009003 7.9e-31 137.5 141 69.5
unitig_748.g8143 Utricularia gibba HOM05D001969 ORTHO05D009003 7.9e-31 137.5 141 68.8
Gohir.D02G182700 Gossypium hirsutum HOM05D001969 ORTHO05D009003 1.3e-30 136.7 136 69.9
Gohir.A03G159600 Gossypium hirsutum HOM05D001969 ORTHO05D009003 1.8e-30 136.3 136 70.6
Nn1g03931 Nelumbo nucifera HOM05D001969 ORTHO05D009003 1.8e-30 136.3 136 68.4
Aqoxy6G02660 Aquilegia oxysepala HOM05D001969 ORTHO05D009003 2.3e-30 136.0 138 69.6
Actinidia39674 Actinidia chinensis HOM05D001969 ORTHO05D003463 3.0e-30 135.6 129 69.8
Duzib248G0251 Durio zibethinus HOM05D001969 ORTHO05D009003 3.0e-30 135.6 136 69.1
QL08p048209 Quercus lobata HOM05D001969 ORTHO05D009003 3.0e-30 135.6 133 67.7
Glyma.18G235000 Glycine max HOM05D001969 ORTHO05D009003 2.5e-29 132.5 137 70.1
Potri.013G145800 Populus trichocarpa HOM05D001969 ORTHO05D009003 3.3e-29 132.1 136 66.9
Glyma.09G257600 Glycine max HOM05D001969 ORTHO05D009003 4.3e-29 131.7 128 71.1
VMungo1127G0255 Vigna mungo HOM05D001969 ORTHO05D009003 5.7e-29 131.3 128 70.3
MBI04_g38761_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 1.3e-28 130.2 135 67.4
CANSAT21G1059 Cannabis sativa HOM05D001969 ORTHO05D009003 1.6e-28 129.8 128 69.5
Sed0009336 Sechium edule HOM05D001969 ORTHO05D009003 1.6e-28 129.8 130 66.9
Cfa003704 Carpinus fangiana HOM05D001969 ORTHO05D009003 3.7e-28 128.6 128 70.3
Phvul.011G177800 Phaseolus vulgaris HOM05D001969 ORTHO05D009003 4.8e-28 128.3 128 68.8
PGR142G0421 Punica granatum HOM05D001969 ORTHO05D003463 6.3e-28 127.9 127 68.5
MD17G1082700 Malus domestica HOM05D001969 ORTHO05D009003 8.2e-28 127.5 132 69.7
Lj3g0006045 Lotus japonicus HOM05D001969 ORTHO05D009003 1.8e-27 126.3 136 65.4
Ciclev10017445m.g Citrus clementina HOM05D001969 ORTHO05D003463 3.1e-27 125.6 130 56.2
Sed0013701 Sechium edule HOM05D001969 ORTHO05D009003 3.1e-27 125.6 89 64.0
Lalb_Chr19g0135421 Lupinus albus HOM05D001969 ORTHO05D009003 4.1e-27 125.2 128 68.8
RcHm_v2.0_Chr2g0127151 Rosa chinensis HOM05D001969 ORTHO05D009003 4.1e-27 125.2 128 50.8
MBI06_g08467_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 6.9e-27 124.4 139 64.0
MD09G1092600 Malus domestica HOM05D001969 ORTHO05D009003 6.9e-27 124.4 129 67.4
AUR62029451 Chenopodium quinoa HOM05D001969 ORTHO05D009003 9.1e-27 124.0 132 62.9
TWI18G1087 Tripterygium wilfordii HOM05D001969 ORTHO05D009003 9.1e-27 124.0 135 54.1
Lsat_1_v5_gn_2_3941 Lactuca sativa HOM05D001969 ORTHO05D009003 2.0e-26 122.9 125 49.6
CiPaw.16G086600 Carya illinoinensis HOM05D001969 ORTHO05D009003 2.6e-26 122.5 126 72.2
Lj2g0006312 Lotus japonicus HOM05D001969 ORTHO05D009003 4.5e-26 121.7 136 64.0
Manes.13G150950 Manihot esculenta HOM05D001969 ORTHO05D009003 4.5e-26 121.7 83 66.3
EL10Ac3g05654 Beta vulgaris HOM05D001969 ORTHO05D003463 2.2e-25 119.4 128 68.8
Medtr4g065010 Medicago truncatula HOM05D001969 ORTHO05D009003 2.9e-25 119.0 130 66.2
CDE04G1317 Ceratophyllum demersum HOM05D004539 ORTHO05D009003 8.5e-25 117.5 120 71.7
Gorai.005G205100 Gossypium raimondii HOM05D001969 ORTHO05D003463 1.4e-24 116.7 122 71.3
ATR1001G005 Amborella trichopoda HOM05D001969 ORTHO05D009003 1.9e-24 116.3 136 58.8
FAN05G0495 Fragaria x ananassa HOM05D001969 ORTHO05D003463 1.9e-24 116.3 80 57.5
Psat7g197120 Pisum sativum HOM05D001969 ORTHO05D009003 4.2e-24 115.2 132 64.4
Haze_15783 Corylus avellana HOM05D001969 ORTHO05D009003 5.5e-24 114.8 120 70.0
Medtr4g046043 Medicago truncatula HOM05D001969 ORTHO05D009003 5.5e-24 114.8 132 62.9
SEGI_26592 Sequoiadendron giganteum HOM05D001969 ORTHO05D009003 5.5e-24 114.8 131 58.0
Ca_20693_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 7.2e-24 114.4 132 62.9
Ca_30106_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 7.2e-24 114.4 132 62.9
GSVIVG01030575001 Vitis vinifera HOM05D001969 ORTHO05D009003 7.2e-24 114.4 119 66.4
Eucgr.K00935 Eucalyptus grandis HOM05D001969 ORTHO05D009003 1.6e-23 113.2 140 56.4
Sc03g0002190 Simmondsia chinensis HOM05D001969 ORTHO05D009003 3.6e-23 112.1 136 53.7
TPR.G21647 Trifolium pratense HOM05D001969 ORTHO05D009003 1.4e-22 110.2 132 62.1
Mapoly0071s0092 Marchantia polymorpha HOM05D001969 ORTHO05D009003 6.7e-22 107.8 140 55.7
TPR.G31971 Trifolium pratense HOM05D001669 ORTHO05D006496 1.1e-21 107.1 82 53.7
Zm00001eb194600 Zea mays HOM05D001969 ORTHO05D009003 1.5e-21 106.7 132 58.3
Zm00001eb072880 Zea mays HOM05D001969 ORTHO05D009003 2.0e-21 106.3 130 58.5
Zm00001eb225500 Zea mays HOM05D001969 ORTHO05D009003 3.3e-21 105.5 128 60.2
Zm00001eb414500 Zea mays HOM05D001969 ORTHO05D009003 4.4e-21 105.1 128 59.4
Zm00001eb194610 Zea mays HOM05D001969 ORTHO05D009003 5.7e-21 104.8 128 59.4
HPP92_010084 Vanilla planifolia HOM05D001969 ORTHO05D009003 1.3e-20 103.6 140 56.4
HPP92_010093 Vanilla planifolia HOM05D001969 ORTHO05D009003 1.3e-20 103.6 140 56.4
CsaV3_6G012510 Cucumis sativus L. HOM05D001969 ORTHO05D003463 4.8e-20 101.7 111 67.6
Zm00001eb350110 Zea mays HOM05D001969 ORTHO05D009003 6.3e-20 101.3 128 57.0
PSO384G2148 Papaver somniferum HOM05D001969 ORTHO05D009003 1.4e-19 100.1 72 58.3
Os07g0530300 Oryza sativa ssp. japonica HOM05D001969 ORTHO05D009003 5.3e-19 98.2 132 53.8
PSO339G1404 Papaver somniferum HOM05D001969 ORTHO05D009003 6.9e-19 97.8 72 56.9
Aa31LG9G15650 Aethionema arabicum HOM05D001969 ORTHO05D009003 1.0e-17 94.0 136 35.3
THA.LOC104811178 Tarenaya hassleriana HOM05D001969 ORTHO05D009003 1.3e-17 93.6 143 33.6
Pp3c6_17280 Physcomitrium patens HOM05D001969 ORTHO05D009003 1.7e-17 93.2 131 55.7
Manes.06G013500 Manihot esculenta HOM05D001969 ORTHO05D009003 2.9e-17 92.4 111 43.2
Rhsim04G0065900 Rhododendron simsii HOM05D001969 ORTHO05D003463 3.8e-17 92.0 99 76.8
PSO017G7338 Papaver somniferum HOM05D001969 ORTHO05D009003 8.5e-17 90.9 139 51.1
Hma1.2p1_0832F.1_g225700 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 2.5e-16 89.4 136 58.1
AL3G54010 Arabidopsis lyrata HOM05D001969 ORTHO05D009003 1.0e-14 84.0 131 40.5
Ah.07g207260 Amaranthus hybridus HOM05D001969 ORTHO05D003463 1.1e-13 80.5 115 50.4
Cpa.g.sc17.168 Carica papaya HOM05D001969 ORTHO05D003463 1.5e-13 80.1 115 59.1
Zm00001eb414510 Zea mays HOM05D001969 ORTHO05D009003 7.4e-13 77.8 62 54.8
MCO02G305 Micromonas commoda HOM05D001969 ORTHO05D009003 1.3e-12 77.0 127 49.6
FAN02G3777 Fragaria x ananassa HOM05D001969 ORTHO05D009003 6.3e-12 74.7 94 56.4
SMO351G0323 Selaginella moellendorffii HOM05D001969 ORTHO05D009003 1.1e-11 73.9 79 39.2
PSO675G3991 Papaver somniferum HOM05D001969 ORTHO05D009003 5.3e-11 71.6 93 41.9
BcaC07g41194 Brassica carinata HOM05D001969 ORTHO05D003463 2.6e-10 69.3 117 32.5
C08p42010 Brassica napus HOM05D001969 ORTHO05D003463 2.6e-10 69.3 117 32.5
BolC8t51763H Brassica oleracea HOM05D001969 ORTHO05D003463 2.6e-10 69.3 117 32.5
BcaB08g34941 Brassica carinata HOM05D001969 ORTHO05D003463 1.3e-09 67.0 122 30.3
Aa31LG8G17650 Aethionema arabicum HOM05D001969 ORTHO05D003463 1.7e-09 66.6 105 30.5
A09p58710 Brassica napus HOM05D001969 ORTHO05D003463 1.7e-09 66.6 117 30.8
BraA09t41257Z Brassica rapa HOM05D001969 ORTHO05D003463 1.7e-09 66.6 117 30.8
Eucgr.K00932 Eucalyptus grandis HOM05D001969 ORTHO05D009003 4.2e-08 62.0 58 44.8
Cre02.g075550 Chlamydomonas reinhardtii HOM05D001969 ORTHO05D009003 5.5e-08 61.6 140 40.7
Thhalv10001991m.g Eutrema salsugineum HOM05D001969 ORTHO05D003463 2.1e-07 59.7 118 28.8
Hma1.2p1_0384F.1_g141150 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 6.7e-06 54.7 72 36.1


User provided reference genes

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