Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047260.2 Olea europaea HOM05D003926 ORTHO05D005273 8.8e-102 373.6 190 100.0
Lj4C124T8 Lonicera japonica HOM05D003926 ORTHO05D005273 6.2e-63 244.6 158 79.1
MSTRG.23855 Avicennia marina HOM05D003926 ORTHO05D005273 5.8e-61 238.0 333 45.3
Cc07_g04520 Coffea canephora HOM05D003926 ORTHO05D005273 1.3e-60 236.9 335 45.1
Cpa.g.sc14.238 Carica papaya HOM05D003926 ORTHO05D005273 2.2e-60 236.1 147 83.0
Dinv33870 Davidia involucrata HOM05D003926 ORTHO05D005273 2.9e-60 235.7 335 44.2
Dinv34905 Davidia involucrata HOM05D003926 ORTHO05D005273 3.8e-60 235.3 158 77.8
SGA_v2.0_scaffold52G19072 Striga asiatica HOM05D003926 ORTHO05D005273 3.8e-60 235.3 335 44.8
Lsat_1_v5_gn_4_173381 Lactuca sativa HOM05D003926 ORTHO05D005273 2.4e-59 232.6 158 77.2
GSVIVG01036538001 Vitis vinifera HOM05D003926 ORTHO05D005273 2.4e-59 232.6 158 75.9
CSS0002647 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 3.2e-59 232.3 335 43.6
CSS0025257 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 3.2e-59 232.3 335 43.6
Actinidia18083 Actinidia chinensis HOM05D003926 ORTHO05D005273 9.3e-59 230.7 158 75.9
Aqoxy3G03752 Aquilegia oxysepala HOM05D003926 ORTHO05D005273 9.3e-59 230.7 149 78.5
Ciclev10010885m.g Citrus clementina HOM05D003926 ORTHO05D005273 1.2e-58 230.3 158 75.3
Lalb_Chr21g0318281 Lupinus albus HOM05D003926 ORTHO05D005273 1.6e-58 229.9 148 79.7
MBI15_g05000_MAGBIO Magnolia biondii HOM05D003926 ORTHO05D005273 1.6e-58 229.9 147 78.2
Atru.chr8.620 Acer truncatum HOM05D003926 ORTHO05D005273 4.6e-58 228.4 158 75.9
Hund16238 Selenicereus undatus HOM05D003926 ORTHO05D005273 4.6e-58 228.4 335 43.9
Atru.chr12.1304 Acer truncatum HOM05D003926 ORTHO05D005273 6.0e-58 228.0 158 75.3
Peaxi162Scf00020g02342 Petunia axillaris HOM05D003926 ORTHO05D005273 6.0e-58 228.0 147 79.6
MD17G1066300 Malus domestica HOM05D003926 ORTHO05D005273 7.8e-58 227.6 148 80.4
MD09G1075600 Malus domestica HOM05D003926 ORTHO05D005273 1.0e-57 227.3 147 81.0
PSO063G5950 Papaver somniferum HOM05D003926 ORTHO05D005273 1.0e-57 227.3 148 77.7
PSO782G5674 Papaver somniferum HOM05D003926 ORTHO05D005273 1.0e-57 227.3 148 77.7
TAR622G1093 Trochodendron aralioides HOM05D003926 ORTHO05D005273 1.0e-57 227.3 148 77.7
ECA232G4780 Erigeron canadensis HOM05D003926 ORTHO05D005273 1.3e-57 226.9 159 75.5
Manes.02G059900 Manihot esculenta HOM05D003926 ORTHO05D005273 1.3e-57 226.9 147 77.6
Nitab4.5_0009887g0010 Nicotiana tabacum HOM05D003926 ORTHO05D005273 1.3e-57 226.9 147 80.3
CAN.G497.55 Capsicum annuum HOM05D003926 ORTHO05D005273 1.7e-57 226.5 158 74.7
TAR374G0863 Trochodendron aralioides HOM05D003926 ORTHO05D005273 1.7e-57 226.5 149 78.5
Gohir.A07G178700 Gossypium hirsutum HOM05D003926 ORTHO05D005273 3.9e-57 225.3 147 79.6
Gohir.D07G186000 Gossypium hirsutum HOM05D003926 ORTHO05D005273 3.9e-57 225.3 147 79.6
Gorai.001G206500 Gossypium raimondii HOM05D003926 ORTHO05D005273 3.9e-57 225.3 147 79.6
Sopen02g034050 Solanum pennellii HOM05D003926 ORTHO05D005273 3.9e-57 225.3 158 74.1
THA.LOC104802985 Tarenaya hassleriana HOM05D003926 ORTHO05D005273 3.9e-57 225.3 161 72.7
arahy.Tifrunner.gnm1.ann1.FDTJ9Q Arachis hypogaea HOM05D003926 ORTHO05D005273 5.1e-57 224.9 147 81.6
arahy.Tifrunner.gnm1.ann1.IQIT5J Arachis hypogaea HOM05D003926 ORTHO05D005273 5.1e-57 224.9 147 81.6
Solyc02g089260.4 Solanum lycopersicum HOM05D003926 ORTHO05D005273 5.1e-57 224.9 158 74.1
Nitab4.5_0001339g0050 Nicotiana tabacum HOM05D003926 ORTHO05D005273 6.6e-57 224.6 147 79.6
CANSAT64G0948 Cannabis sativa HOM05D003926 ORTHO05D005273 8.7e-57 224.2 333 44.1
AUR62023153 Chenopodium quinoa HOM05D003926 ORTHO05D005273 8.7e-57 224.2 335 43.0
Nn3g17538 Nelumbo nucifera HOM05D003926 ORTHO05D005273 8.7e-57 224.2 147 76.9
QL02p065183 Quercus lobata HOM05D003926 ORTHO05D005273 8.7e-57 224.2 147 79.6
EL10Ac2g04434 Beta vulgaris HOM05D003926 ORTHO05D005273 1.5e-56 223.4 158 73.4
Glyma.08G252650 Glycine max HOM05D003926 ORTHO05D005273 1.5e-56 223.4 147 78.2
DCAR_011007 Daucus carota HOM05D003926 ORTHO05D005273 1.9e-56 223.0 147 77.6
Prupe.3G248400 Prunus persica HOM05D003926 ORTHO05D005273 1.9e-56 223.0 147 79.6
vmacro05610 Vaccinium macrocarpon HOM05D003926 ORTHO05D005273 2.5e-56 222.6 158 73.4
FvH4_6g46320 Fragaria vesca HOM05D003926 ORTHO05D005273 3.3e-56 222.2 147 78.2
COL.COLO4_10659 Corchorus olitorius HOM05D003926 ORTHO05D005273 4.3e-56 221.9 147 77.6
Ca_06914_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 5.6e-56 221.5 147 79.6
Ca_06916_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 5.6e-56 221.5 147 79.6
Lj1g0000156 Lotus japonicus HOM05D003926 ORTHO05D005273 5.6e-56 221.5 147 76.9
Lj1g0024205 Lotus japonicus HOM05D003926 ORTHO05D005273 5.6e-56 221.5 147 76.9
Potri.017G101100 Populus trichocarpa HOM05D003926 ORTHO05D005273 5.6e-56 221.5 147 75.5
RcHm_v2.0_Chr2g0164791 Rosa chinensis HOM05D003926 ORTHO05D005273 5.6e-56 221.5 147 78.2
Phvul.008G025700 Phaseolus vulgaris HOM05D003926 ORTHO05D005273 7.3e-56 221.1 147 76.9
Sabra17G0086900 Salix brachista HOM05D003926 ORTHO05D005273 9.6e-56 220.7 147 76.2
Psat3g203080 Pisum sativum HOM05D003926 ORTHO05D005273 1.6e-55 219.9 147 77.6
Ah.16g101010 Amaranthus hybridus HOM05D003926 ORTHO05D005273 2.1e-55 219.5 335 42.1
Duzib211G0130 Durio zibethinus HOM05D003926 ORTHO05D005273 2.1e-55 219.5 148 75.7
SEGI_07483 Sequoiadendron giganteum HOM05D003926 ORTHO05D005273 2.1e-55 219.5 148 74.3
ATR1101G059 Amborella trichopoda HOM05D003926 ORTHO05D005273 2.8e-55 219.2 144 78.5
CDE01G0480 Ceratophyllum demersum HOM05D003926 ORTHO05D005273 2.8e-55 219.2 147 76.2
Cfa007698 Carpinus fangiana HOM05D003926 ORTHO05D005273 3.6e-55 218.8 147 78.2
Lalb_Chr06g0174881 Lupinus albus HOM05D003926 ORTHO05D005273 4.8e-55 218.4 147 76.9
Medtr7g017100 Medicago truncatula HOM05D003926 ORTHO05D005273 6.2e-55 218.0 147 78.2
Glyma.18G275200 Glycine max HOM05D003926 ORTHO05D005273 8.1e-55 217.6 148 75.7
HPP92_020589 Vanilla planifolia HOM05D003926 ORTHO05D005273 8.1e-55 217.6 148 72.3
Duzib133G0169 Durio zibethinus HOM05D003926 ORTHO05D005273 1.1e-54 217.2 147 75.5
AUR62009475 Chenopodium quinoa HOM05D003926 ORTHO05D005273 1.4e-54 216.9 335 42.1
ClCG11G004990 Citrullus lanatus HOM05D003926 ORTHO05D005273 1.4e-54 216.9 165 72.7
MELO3C022053.2 Cucumis melo HOM05D003926 ORTHO05D005273 1.4e-54 216.9 165 72.7
CsaV3_5G038720 Cucumis sativus L. HOM05D003926 ORTHO05D005273 1.4e-54 216.9 165 72.7
Haze_14378 Corylus avellana HOM05D003926 ORTHO05D005273 1.8e-54 216.5 147 78.2
PGR004G0818 Punica granatum HOM05D003926 ORTHO05D005273 2.4e-54 216.1 147 75.5
Aa31LG5G12790 Aethionema arabicum HOM05D003926 ORTHO05D005273 3.1e-54 215.7 159 72.3
ATR0691G267 Amborella trichopoda HOM05D003926 ORTHO05D005273 3.1e-54 215.7 144 77.1
Os09g0247700 Oryza sativa ssp. japonica HOM05D003926 ORTHO05D005273 5.3e-54 214.9 147 74.1
Sc14g0004890 Simmondsia chinensis HOM05D003926 ORTHO05D005273 9.0e-54 214.2 155 72.3
CiPaw.03G082600 Carya illinoinensis HOM05D003926 ORTHO05D005273 1.2e-53 213.8 335 42.1
HanXRQChr15g0464821 Helianthus annuus HOM05D003926 ORTHO05D005273 1.5e-53 213.4 147 76.9
Mapoly0031s0115 Marchantia polymorpha HOM05D003926 ORTHO05D005273 2.6e-53 212.6 148 70.9
Thecc.04G107500 Theobroma cacao HOM05D003926 ORTHO05D005273 2.6e-53 212.6 335 41.8
TPR.G23405 Trifolium pratense HOM05D003926 ORTHO05D005273 5.8e-53 211.5 147 76.9
AT3G02260 Arabidopsis thaliana HOM05D003926 ORTHO05D005273 1.3e-52 210.3 159 72.3
Thhalv10019869m.g Eutrema salsugineum HOM05D003926 ORTHO05D005273 1.7e-52 209.9 159 72.3
Eucgr.I02068 Eucalyptus grandis HOM05D003926 ORTHO05D005273 2.2e-52 209.5 147 72.1
Pp3c7_7030 Physcomitrium patens HOM05D003926 ORTHO05D005273 2.2e-52 209.5 147 72.8
Zm00001eb308350 Zea mays HOM05D003926 ORTHO05D005273 2.2e-52 209.5 164 67.7
SMO361G0659 Selaginella moellendorffii HOM05D003926 ORTHO05D005273 3.8e-52 208.8 159 66.7
AL3G11530 Arabidopsis lyrata HOM05D003926 ORTHO05D005273 4.9e-52 208.4 159 71.7
CARHR076230 Cardamine hirsuta HOM05D003926 ORTHO05D005273 4.9e-52 208.4 159 71.7
Sp3g01330 Schrenkiella parvula HOM05D003926 ORTHO05D005273 4.9e-52 208.4 159 71.7
Carub.0003s0138 Capsella rubella HOM05D003926 ORTHO05D005273 6.4e-52 208.0 335 41.2
A05p45140 Brassica napus HOM05D003926 ORTHO05D005273 1.9e-51 206.5 159 70.4
BolC5t35094H Brassica oleracea HOM05D003926 ORTHO05D005273 1.9e-51 206.5 159 70.4
BraA05t23147Z Brassica rapa HOM05D003926 ORTHO05D005273 1.9e-51 206.5 159 70.4
BcaC05g30340 Brassica carinata HOM05D003926 ORTHO05D005273 2.4e-51 206.1 159 70.4
C09p75640 Brassica napus HOM05D003926 ORTHO05D005273 9.3e-51 204.1 159 69.8
Pp3c11_22340 Physcomitrium patens HOM05D003926 ORTHO05D005273 9.3e-51 204.1 147 70.7
Sed0020046 Sechium edule HOM05D003926 ORTHO05D005273 9.3e-51 204.1 165 69.7
TWI32G0285 Tripterygium wilfordii HOM05D003926 ORTHO05D005273 3.5e-50 202.2 147 74.1
SHI25822 Sapria himalayana HOM05D003926 ORTHO05D005273 7.9e-50 201.1 147 70.7
Sabra16G0314500 Salix brachista HOM05D004145 ORTHO05D004879 9.6e-48 194.1 142 71.8
Rhsim10G0059600 Rhododendron simsii HOM05D003926 ORTHO05D005273 6.9e-46 188.0 132 72.7
Sabra16G0314400 Salix brachista HOM05D004145 ORTHO05D004879 3.2e-43 179.1 132 72.7
CBR_g24086 Chara braunii HOM05D003926 ORTHO05D000048 7.1e-43 177.9 164 59.8
SMO361G0392 Selaginella moellendorffii HOM05D003926 ORTHO05D005273 6.0e-34 148.3 159 52.2
SMO199G0087 Selaginella moellendorffii HOM05D003926 ORTHO05D005273 2.4e-30 136.3 159 50.9
MCO11G572 Micromonas commoda HOM05D003926 ORTHO05D005273 7.4e-24 114.8 184 41.3
Rhsim10G0100000 Rhododendron simsii HOM05D003926 ORTHO05D005273 3.4e-13 79.3 48 77.1
Migut.H00583 Erythranthe guttata HOM05D003926 ORTHO05D005273 1.0e-12 77.8 43 83.7


User provided reference genes

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