Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047209.1 Olea europaea HOM05D004581 ORTHO05D006211 2.3e-151 538.9 272 100.0
SGA_v2.0_scaffold105G30506 Striga asiatica HOM05D004581 ORTHO05D006211 7.3e-49 198.4 201 55.2
Migut.J01852 Erythranthe guttata HOM05D004581 ORTHO05D006211 2.9e-45 186.4 182 58.2
MSTRG.19916 Avicennia marina HOM05D004581 ORTHO05D006211 3.7e-45 186.0 185 59.5
SalBow6G0811 Salvia bowleyana HOM05D004581 ORTHO05D006211 2.3e-39 166.8 185 51.9
Oeu034269.1 Olea europaea HOM05D004581 ORTHO05D006211 4.0e-39 166.0 114 79.8
unitig_0.g528 Utricularia gibba HOM05D004581 ORTHO05D006211 2.1e-35 153.7 193 47.2
Nitab4.5_0000663g0140 Nicotiana tabacum HOM05D004581 ORTHO05D006211 1.5e-33 147.5 169 51.5
Cc06_g15670 Coffea canephora HOM05D004581 ORTHO05D006211 3.3e-33 146.4 180 47.2
Nitab4.5_0006360g0040 Nicotiana tabacum HOM05D004581 ORTHO05D006211 3.3e-33 146.4 172 50.0
PGSC0003DMG400002716 Solanum tuberosum HOM05D004581 ORTHO05D006211 3.3e-33 146.4 185 46.5
Solyc09g009140.3 Solanum lycopersicum HOM05D004581 ORTHO05D006211 1.4e-31 141.0 188 45.7
Sopen09g003860 Solanum pennellii HOM05D004581 ORTHO05D006211 1.4e-31 141.0 197 45.2
Peaxi162Scf00169g01812 Petunia axillaris HOM05D004581 ORTHO05D006211 2.9e-29 133.3 111 64.0
CSS0001135 Camellia sinensis var. sinensis HOM05D004581 ORTHO05D006211 7.1e-28 128.6 153 49.0
vmacro07891 Vaccinium macrocarpon HOM05D004581 ORTHO05D006211 7.8e-27 125.2 122 54.9
Aqoxy1G00145 Aquilegia oxysepala HOM05D004581 ORTHO05D006211 1.3e-26 124.4 116 60.3
Rhsim03G0004600 Rhododendron simsii HOM05D004581 ORTHO05D006211 3.0e-26 123.2 119 54.6
PSO339G4020 Papaver somniferum HOM05D004581 ORTHO05D006211 2.5e-25 120.2 164 44.5
PSO384G2020 Papaver somniferum HOM05D004581 ORTHO05D006211 3.3e-25 119.8 167 46.1
Hund19211 Selenicereus undatus HOM05D004581 ORTHO05D006211 5.6e-25 119.0 110 58.2
TAR369G0383 Trochodendron aralioides HOM05D004581 ORTHO05D006211 5.6e-25 119.0 172 42.4
DCAR_013660 Daucus carota HOM05D004581 ORTHO05D006211 1.6e-24 117.5 124 53.2
TAR623G0668 Trochodendron aralioides HOM05D004581 ORTHO05D006211 2.1e-24 117.1 159 47.2
AUR62015335 Chenopodium quinoa HOM05D004581 ORTHO05D006211 2.8e-24 116.7 166 45.8
Nn7g35977 Nelumbo nucifera HOM05D004581 ORTHO05D006211 3.6e-24 116.3 165 44.8
EL10Ac2g03990 Beta vulgaris HOM05D004581 ORTHO05D006211 1.8e-23 114.0 165 43.6
CAN.G824.31 Capsicum annuum HOM05D004581 ORTHO05D006211 1.3e-21 107.8 116 55.2
Sc25g0005070 Simmondsia chinensis HOM05D004581 ORTHO05D006211 2.9e-21 106.7 90 64.4
MBI19_g17421_MAGBIO Magnolia biondii HOM05D004581 ORTHO05D006211 3.8e-21 106.3 162 40.1
Lsat_1_v5_gn_5_165321 Lactuca sativa HOM05D004581 ORTHO05D006211 3.2e-20 103.2 163 44.8
CDE04G2925 Ceratophyllum demersum HOM05D004581 ORTHO05D006211 4.2e-20 102.8 121 47.1
CiPaw.09G028800 Carya illinoinensis HOM05D004581 ORTHO05D006211 9.3e-20 101.7 164 42.1
GSVIVG01033474001 Vitis vinifera HOM05D004581 ORTHO05D006211 9.3e-20 101.7 128 45.3
Duzib093G1426 Durio zibethinus HOM05D004581 ORTHO05D006211 2.7e-19 100.1 166 39.2
HanXRQChr01g0010041 Helianthus annuus HOM05D004581 ORTHO05D006211 2.7e-19 100.1 181 37.6
Thecc.05G174500 Theobroma cacao HOM05D004581 ORTHO05D006211 3.5e-19 99.8 172 41.9
ATR0598G120 Amborella trichopoda HOM05D004581 ORTHO05D006211 4.6e-19 99.4 126 47.6
Atru.chr8.1150 Acer truncatum HOM05D004581 ORTHO05D006211 7.9e-19 98.6 169 40.2
COL.COLO4_29354 Corchorus olitorius HOM05D004581 ORTHO05D006211 7.9e-19 98.6 156 42.9
PGR142G1146 Punica granatum HOM05D004581 ORTHO05D006211 1.0e-18 98.2 144 40.3
FAN02G3358 Fragaria x ananassa HOM05D004581 ORTHO05D006211 1.3e-18 97.8 119 49.6
ECA248G3562 Erigeron canadensis HOM05D004581 ORTHO05D006211 1.8e-18 97.4 143 43.4
FAN05G2417 Fragaria x ananassa HOM05D004581 ORTHO05D006211 2.3e-18 97.1 119 48.7
MD12G1055200 Malus domestica HOM05D004581 ORTHO05D006211 2.3e-18 97.1 171 39.8
Ciclev10011052m.g Citrus clementina HOM05D004581 ORTHO05D006211 3.0e-18 96.7 171 41.5
FvH4_6g21970 Fragaria vesca HOM05D004581 ORTHO05D006211 3.0e-18 96.7 119 48.7
FAN14G2436 Fragaria x ananassa HOM05D004581 ORTHO05D006211 3.0e-18 96.7 119 48.7
RcHm_v2.0_Chr3g0479271 Rosa chinensis HOM05D004581 ORTHO05D006211 3.9e-18 96.3 119 48.7
Lju124A23G70 Lonicera japonica HOM05D004581 ORTHO05D006211 5.1e-18 95.9 85 62.4
MD14G1054400 Malus domestica HOM05D004581 ORTHO05D006211 5.1e-18 95.9 151 41.1
MELO3C009016.2 Cucumis melo HOM05D004581 ORTHO05D006211 6.7e-18 95.5 99 49.5
CsaV3_4G031280 Cucumis sativus L. HOM05D004581 ORTHO05D006211 6.7e-18 95.5 112 45.5
Lsat_1_v5_gn_9_26020 Lactuca sativa HOM05D004581 ORTHO05D006211 6.7e-18 95.5 160 40.0
Carub.0006s0556 Capsella rubella HOM05D004581 ORTHO05D006211 8.7e-18 95.1 104 51.9
Gohir.D04G089200 Gossypium hirsutum HOM05D004581 ORTHO05D006211 8.7e-18 95.1 150 42.0
Sabra06G0149000 Salix brachista HOM05D004581 ORTHO05D006211 8.7e-18 95.1 170 40.0
Potri.006G194200 Populus trichocarpa HOM05D004581 ORTHO05D006211 1.5e-17 94.4 170 40.6
CiPaw.10G025500 Carya illinoinensis HOM05D004581 ORTHO05D006211 1.9e-17 94.0 144 43.8
QL07p024331 Quercus lobata HOM05D004581 ORTHO05D006211 1.9e-17 94.0 110 49.1
QL07p024348 Quercus lobata HOM05D004581 ORTHO05D006211 1.9e-17 94.0 110 49.1
QL07p024412 Quercus lobata HOM05D004581 ORTHO05D006211 1.9e-17 94.0 110 49.1
Sed0021834 Sechium edule HOM05D004581 ORTHO05D006211 1.9e-17 94.0 137 42.3
Lalb_Chr18g0048011 Lupinus albus HOM05D004581 ORTHO05D006211 2.5e-17 93.6 91 49.5
TWI53G1098 Tripterygium wilfordii HOM05D004581 ORTHO05D006211 2.5e-17 93.6 146 40.4
TWI77G0968 Tripterygium wilfordii HOM05D004581 ORTHO05D006211 2.5e-17 93.6 170 41.2
Gorai.012G099300 Gossypium raimondii HOM05D004581 ORTHO05D006211 3.3e-17 93.2 119 49.6
Sabra16G0062700 Salix brachista HOM05D004581 ORTHO05D006211 5.6e-17 92.4 166 37.3
AT5G06680 Arabidopsis thaliana HOM05D004581 ORTHO05D006211 7.4e-17 92.0 80 57.5
Gohir.A04G057400 Gossypium hirsutum HOM05D004581 ORTHO05D006211 7.4e-17 92.0 118 49.2
Sp6g36190 Schrenkiella parvula HOM05D004581 ORTHO05D006211 7.4e-17 92.0 152 40.1
AL6G16770 Arabidopsis lyrata HOM05D004581 ORTHO05D006211 9.6e-17 91.7 152 41.4
CARHR206520 Cardamine hirsuta HOM05D004581 ORTHO05D006211 9.6e-17 91.7 80 57.5
ECA247G1565 Erigeron canadensis HOM05D004581 ORTHO05D006211 9.6e-17 91.7 137 43.1
Duzib106G1052 Durio zibethinus HOM05D004581 ORTHO05D006211 1.3e-16 91.3 162 40.7
Thhalv10012676m.g Eutrema salsugineum HOM05D004581 ORTHO05D006211 1.3e-16 91.3 152 40.1
Haze_20018 Corylus avellana HOM05D004581 ORTHO05D006211 1.6e-16 90.9 115 47.0
THA.LOC104809935 Tarenaya hassleriana HOM05D004581 ORTHO05D006211 1.6e-16 90.9 130 45.4
CANSAT64G2519 Cannabis sativa HOM05D004581 ORTHO05D006211 4.8e-16 89.4 182 37.4
Aa31sc40G20 Aethionema arabicum HOM05D004581 ORTHO05D006211 8.1e-16 88.6 151 41.7
SHI31781 Sapria himalayana HOM05D004581 ORTHO05D006211 1.1e-15 88.2 153 37.9
Cfa020147 Carpinus fangiana HOM05D004581 ORTHO05D006211 1.4e-15 87.8 86 52.3
C02p02810 Brassica napus HOM05D004581 ORTHO05D006211 1.8e-15 87.4 97 49.5
ClCG04G001070 Citrullus lanatus HOM05D004581 ORTHO05D006211 1.8e-15 87.4 103 45.6
Potri.016G059900 Populus trichocarpa HOM05D004581 ORTHO05D006211 1.8e-15 87.4 164 37.8
BraA02t04889Z Brassica rapa HOM05D004581 ORTHO05D006211 2.4e-15 87.0 85 52.9
BolC2t06246H Brassica oleracea HOM05D004581 ORTHO05D006211 4.0e-15 86.3 83 53.0
Eucgr.K01849 Eucalyptus grandis HOM05D004581 ORTHO05D006211 4.0e-15 86.3 167 36.5
Actinidia32405 Actinidia chinensis HOM05D004581 ORTHO05D006211 5.3e-15 85.9 85 51.8
arahy.Tifrunner.gnm1.ann1.U2Q4B5 Arachis hypogaea HOM05D004581 ORTHO05D006211 1.5e-14 84.3 87 49.4
Phvul.001G144000 Phaseolus vulgaris HOM05D004581 ORTHO05D006211 1.5e-14 84.3 80 52.5
arahy.Tifrunner.gnm1.ann1.6E61XV Arachis hypogaea HOM05D004581 ORTHO05D006211 2.6e-14 83.6 83 50.6
Manes.09G037300 Manihot esculenta HOM05D004581 ORTHO05D006211 9.9e-14 81.6 126 42.1
Mapoly0001s0406 Marchantia polymorpha HOM05D004581 ORTHO05D006211 1.3e-13 81.3 77 51.9
VMungo1383G1342 Vigna mungo HOM05D004581 ORTHO05D006211 1.3e-13 81.3 80 51.2
Glyma.19G149500 Glycine max HOM05D004581 ORTHO05D006211 2.2e-13 80.5 80 52.5
BcaB05g21655 Brassica carinata HOM05D004581 ORTHO05D006211 4.9e-13 79.3 132 41.7
Medtr7g093560 Medicago truncatula HOM05D004581 ORTHO05D006211 4.9e-13 79.3 93 45.2
A10p29710 Brassica napus HOM05D004581 ORTHO05D006211 8.4e-13 78.6 87 52.9
BraA10t45012Z Brassica rapa HOM05D004581 ORTHO05D006211 8.4e-13 78.6 87 52.9
Ca_08535_v3 Cicer arietinum L. HOM05D004581 ORTHO05D006211 8.4e-13 78.6 139 40.3
TPR.G35787 Trifolium pratense HOM05D004581 ORTHO05D006211 1.1e-12 78.2 123 41.5
Pp3c24_16220 Physcomitrium patens HOM05D004581 ORTHO05D006211 9.3e-12 75.1 113 35.4
Pp3c20_16750 Physcomitrium patens HOM05D004581 ORTHO05D006211 2.7e-11 73.6 109 34.9
CDE06G1527 Ceratophyllum demersum HOM05D004581 ORTHO05D006211 3.5e-11 73.2 138 41.3
Glyma.03G146200 Glycine max HOM05D004581 ORTHO05D006211 3.5e-11 73.2 80 52.5
Lj1g0024119 Lotus japonicus HOM05D004581 ORTHO05D006211 3.5e-11 73.2 84 47.6
HanXRQChr15g0491321 Helianthus annuus HOM05D004581 ORTHO05D006211 4.6e-11 72.8 138 39.1
SMO356G0383 Selaginella moellendorffii HOM05D004581 ORTHO05D006211 7.9e-11 72.0 71 49.3
CBR_g7989 Chara braunii HOM05D004581 ORTHO05D006211 3.3e-09 66.6 80 37.5
Zm00001eb314430 Zea mays HOM05D004581 ORTHO05D006211 7.4e-09 65.5 79 41.8
HPP92_028667 Vanilla planifolia HOM05D004581 ORTHO05D006211 1.3e-08 64.7 76 47.4
Os09g0446200 Oryza sativa ssp. japonica HOM05D004581 ORTHO05D006211 6.2e-08 62.4 74 41.9
Cpa.g.sc85.62 Carica papaya HOM05D004581 ORTHO05D006211 7.6e-06 55.5 85 40.0


User provided reference genes

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