Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047175.1 Olea europaea HOM05D000237 ORTHO05D006530 2.3e-162 575.5 288 100.0
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 1.3e-24 117.9 63 98.4
AUR62013435 Chenopodium quinoa HOM05D000237 ORTHO05D006530 2.0e-17 94.0 160 33.1
Gorai.009G249000 Gossypium raimondii HOM05D000237 ORTHO05D006530 3.9e-16 89.7 167 31.7
vmacro21123 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 1.6e-14 84.3 61 60.7
LjContig00357g0005900 Lotus japonicus HOM05D000237 ORTHO05D005612 6.2e-14 82.4 46 73.9
TPR.G30554 Trifolium pratense HOM05D000237 ORTHO05D006530 6.2e-14 82.4 41 80.5
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.8e-13 80.9 312 27.6
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 2.3e-13 80.5 290 26.2
Haze_17641 Corylus avellana HOM05D000237 ORTHO05D006530 6.8e-13 79.0 143 35.0
A06p17660 Brassica napus HOM05D000237 ORTHO05D006530 2.0e-12 77.4 43 67.4
Actinidia21273 Actinidia chinensis HOM05D000237 ORTHO05D006530 7.5e-12 75.5 135 36.3
C05p20570 Brassica napus HOM05D000237 ORTHO05D006530 6.4e-11 72.4 41 65.9
BolC5t30755H Brassica oleracea HOM05D000237 ORTHO05D006530 6.4e-11 72.4 41 65.9
CiPaw.15G030900 Carya illinoinensis HOM05D000237 ORTHO05D006530 8.3e-11 72.0 136 33.8
Nn5g28444 Nelumbo nucifera HOM05D000237 ORTHO05D006530 8.3e-11 72.0 144 33.3
QL09p032246 Quercus lobata HOM05D000237 ORTHO05D006530 1.1e-10 71.6 144 31.9
Solyc04g057990.4 Solanum lycopersicum HOM05D000237 ORTHO05D006530 2.4e-10 70.5 159 32.1
TAR628G1620 Trochodendron aralioides HOM05D000237 ORTHO05D006530 3.2e-10 70.1 136 33.1
Cfa018423 Carpinus fangiana HOM05D000237 ORTHO05D001145 9.2e-10 68.6 140 32.9
Cc10_g13690 Coffea canephora HOM05D000237 ORTHO05D006530 9.2e-10 68.6 159 29.6
Sopen04g025850 Solanum pennellii HOM05D000237 ORTHO05D006530 9.2e-10 68.6 159 32.1
A08p28930 Brassica napus HOM05D000987 ORTHO05D006530 2.7e-09 67.0 36 66.7
BraA08t34823Z Brassica rapa HOM05D000237 ORTHO05D006530 2.7e-09 67.0 36 66.7
MD15G1133400 Malus domestica HOM05D000237 ORTHO05D006530 3.5e-09 66.6 140 32.9
Ciclev10000009m.g Citrus clementina HOM05D000237 ORTHO05D006530 6.0e-09 65.9 137 31.4
C08p20910 Brassica napus HOM05D000237 ORTHO05D006530 7.8e-09 65.5 36 66.7
BolC8t49729H Brassica oleracea HOM05D000237 ORTHO05D006530 7.8e-09 65.5 36 66.7
Sabra02G0061100 Salix brachista HOM05D000237 ORTHO05D006530 7.8e-09 65.5 136 31.6
DCAR_003591 Daucus carota HOM05D000237 ORTHO05D006530 2.3e-08 63.9 131 33.6
GSVIVG01008802001 Vitis vinifera HOM05D000237 ORTHO05D006530 2.3e-08 63.9 143 30.8
Potri.005G182900 Populus trichocarpa HOM05D000237 ORTHO05D006530 5.1e-08 62.8 135 30.4
TWI32G0010 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 5.1e-08 62.8 144 31.2
Prupe.1G489000 Prunus persica HOM05D000237 ORTHO05D006530 6.6e-08 62.4 139 29.5
SalBow7G1767 Salvia bowleyana HOM05D000237 ORTHO05D006530 1.1e-07 61.6 106 33.0
FAN24G1388 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.5e-07 61.2 132 32.6
Gohir.D05G240100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 1.5e-07 61.2 144 28.5
Potri.002G077700 Populus trichocarpa HOM05D000237 ORTHO05D006530 1.5e-07 61.2 136 30.1
PGR044G0116 Punica granatum HOM05D000237 ORTHO05D006530 1.5e-07 61.2 141 30.5
FAN20G2323 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.9e-07 60.8 132 32.6
Thecc.08G133600 Theobroma cacao HOM05D000237 ORTHO05D006530 1.9e-07 60.8 134 30.6
Migut.C01070 Erythranthe guttata HOM05D000237 ORTHO05D006530 3.3e-07 60.1 128 32.0
FvH4_2g27950 Fragaria vesca HOM05D000237 ORTHO05D006530 4.3e-07 59.7 132 32.6
PGSC0003DMG402025318 Solanum tuberosum HOM05D000237 ORTHO05D006530 4.3e-07 59.7 156 29.5
COL.COLO4_07934 Corchorus olitorius HOM05D000237 ORTHO05D006530 5.6e-07 59.3 131 29.8
CANSAT25G1894 Cannabis sativa HOM05D000237 ORTHO05D006530 9.5e-07 58.5 147 27.9
CBR_g18950 Chara braunii HOM05D000237 ORTHO05D006530 9.5e-07 58.5 44 50.0
TWI34G0547 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 9.5e-07 58.5 136 27.9
Duzib041G0809 Durio zibethinus HOM05D000237 ORTHO05D006530 1.2e-06 58.2 134 27.6
Atru.chr13.1586 Acer truncatum HOM05D000237 ORTHO05D006530 2.1e-06 57.4 141 30.5
Nitab4.5_0003485g0030 Nicotiana tabacum HOM05D000237 ORTHO05D006530 2.1e-06 57.4 160 29.4
Dinv14699 Davidia involucrata HOM05D000237 ORTHO05D006530 2.8e-06 57.0 101 33.7
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 3.6e-06 56.6 138 36.2
CSS0037931 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D006530 3.6e-06 56.6 138 30.4
Glyma.13G034600 Glycine max HOM05D000237 ORTHO05D006530 3.6e-06 56.6 143 30.8
RcHm_v2.0_Chr6g0296771 Rosa chinensis HOM05D000237 ORTHO05D006530 3.6e-06 56.6 136 29.4
CDE08G0007 Ceratophyllum demersum HOM05D000237 ORTHO05D006530 4.7e-06 56.2 140 28.6
Gohir.A05G238100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 4.7e-06 56.2 144 27.1
Nitab4.5_0000317g0120 Nicotiana tabacum HOM05D000237 ORTHO05D006530 4.7e-06 56.2 159 31.4
HanXRQChr09g0256631 Helianthus annuus HOM05D000237 ORTHO05D006530 6.2e-06 55.8 143 27.3
COL.COLO4_07936 Corchorus olitorius HOM05D000237 ORTHO05D006530 8.1e-06 55.5 137 27.0
CsaV3_7G022160 Cucumis sativus L. HOM05D000237 ORTHO05D006530 8.1e-06 55.5 143 30.8


User provided reference genes

Program Settings