Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047172.1 Olea europaea HOM05D000237 ORTHO05D006530 1.3e-108 396.4 189 100.0
CiPaw.15G030900 Carya illinoinensis HOM05D000237 ORTHO05D006530 4.9e-28 128.6 247 37.2
Dinv27266 Davidia involucrata HOM05D000237 ORTHO05D006530 1.6e-26 123.6 151 47.7
FAN27G0451 Fragaria x ananassa HOM05D000237 ORTHO05D006530 4.6e-26 122.1 247 35.6
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 3.9e-25 119.0 247 35.2
FAN20G2323 Fragaria x ananassa HOM05D000237 ORTHO05D006530 3.9e-25 119.0 247 35.2
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 8.7e-25 117.9 240 35.8
Actinidia21273 Actinidia chinensis HOM05D000237 ORTHO05D006530 8.7e-25 117.9 239 36.0
Peaxi162Scf00066g00427 Petunia axillaris HOM05D000237 ORTHO05D006530 3.3e-24 115.9 231 36.4
DCAR_003591 Daucus carota HOM05D000237 ORTHO05D006530 5.6e-24 115.2 240 35.4
Potri.005G182900 Populus trichocarpa HOM05D000237 ORTHO05D006530 5.6e-24 115.2 237 35.0
AUR62013435 Chenopodium quinoa HOM05D000237 ORTHO05D006530 9.6e-24 114.4 264 32.2
VMungo0647G1100 Vigna mungo HOM05D000237 ORTHO05D006530 1.3e-23 114.0 248 33.9
CSS0037931 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D006530 2.1e-23 113.2 241 36.1
MD15G1133400 Malus domestica HOM05D000237 ORTHO05D006530 2.1e-23 113.2 247 34.8
Sabra02G0061100 Salix brachista HOM05D000237 ORTHO05D006530 2.1e-23 113.2 237 34.2
TAR628G1620 Trochodendron aralioides HOM05D000237 ORTHO05D006530 4.8e-23 112.1 231 35.5
COL.COLO4_07934 Corchorus olitorius HOM05D000237 ORTHO05D006530 6.2e-23 111.7 251 33.5
Duzib093G2205 Durio zibethinus HOM05D000237 ORTHO05D006530 6.2e-23 111.7 251 33.1
FvH4_2g27950 Fragaria vesca HOM05D000237 ORTHO05D006530 6.2e-23 111.7 247 34.8
Potri.002G077700 Populus trichocarpa HOM05D000237 ORTHO05D006530 6.2e-23 111.7 247 32.4
Hma1.2p1_0880F.1_g231830 Hydrangea macrophylla HOM05D000237 ORTHO05D006530 8.1e-23 111.3 248 33.5
MD08G1160000 Malus domestica HOM05D000237 ORTHO05D006530 8.1e-23 111.3 184 39.7
Prupe.1G489000 Prunus persica HOM05D000237 ORTHO05D006530 8.1e-23 111.3 247 34.4
Rhsim06G0089600 Rhododendron simsii HOM05D000237 ORTHO05D006530 8.1e-23 111.3 247 35.2
TWI32G0010 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 8.1e-23 111.3 240 35.8
FAN24G1388 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.4e-22 110.5 145 44.8
MBI03_g13492_MAGBIO Magnolia biondii HOM05D000237 ORTHO05D006530 1.4e-22 110.5 224 34.8
EL10Ac1g01364 Beta vulgaris HOM05D000237 ORTHO05D006530 1.8e-22 110.2 249 32.1
Lalb_Chr04g0253551 Lupinus albus HOM05D000237 ORTHO05D006530 1.8e-22 110.2 246 32.9
RcHm_v2.0_Chr6g0296771 Rosa chinensis HOM05D000237 ORTHO05D006530 1.8e-22 110.2 247 33.2
Dinv14699 Davidia involucrata HOM05D000237 ORTHO05D006530 2.4e-22 109.8 245 34.3
QL09p032246 Quercus lobata HOM05D000237 ORTHO05D006530 3.1e-22 109.4 250 33.2
Aa31LG7G5550 Aethionema arabicum HOM05D000237 ORTHO05D006530 4.0e-22 109.0 227 33.9
SalBow7G1767 Salvia bowleyana HOM05D000237 ORTHO05D006530 5.3e-22 108.6 238 35.3
TWI34G0547 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 5.3e-22 108.6 248 33.5
Gorai.009G249000 Gossypium raimondii HOM05D000237 ORTHO05D006530 6.9e-22 108.2 92 56.5
arahy.Tifrunner.gnm1.ann1.JKU5X8 Arachis hypogaea HOM05D000237 ORTHO05D006530 9.0e-22 107.8 248 30.6
Lj1g0018506 Lotus japonicus HOM05D000237 ORTHO05D006530 9.0e-22 107.8 250 32.0
GSVIVG01008802001 Vitis vinifera HOM05D000237 ORTHO05D006530 9.0e-22 107.8 237 34.2
A06p17660 Brassica napus HOM05D000237 ORTHO05D006530 1.5e-21 107.1 255 33.7
HanXRQChr09g0256631 Helianthus annuus HOM05D000237 ORTHO05D006530 2.6e-21 106.3 243 34.2
MELO3C012713.2 Cucumis melo HOM05D000237 ORTHO05D006530 3.4e-21 105.9 237 32.5
Phvul.001G067600 Phaseolus vulgaris HOM05D000237 ORTHO05D006530 3.4e-21 105.9 247 33.2
TPR.G30554 Trifolium pratense HOM05D000237 ORTHO05D006530 5.8e-21 105.1 249 34.5
Thecc.08G133600 Theobroma cacao HOM05D000237 ORTHO05D006530 7.6e-21 104.8 238 33.6
C05p20570 Brassica napus HOM05D000237 ORTHO05D006530 9.9e-21 104.4 255 32.9
BolC5t30755H Brassica oleracea HOM05D000237 ORTHO05D006530 9.9e-21 104.4 255 32.9
Duzib041G0809 Durio zibethinus HOM05D000237 ORTHO05D006530 9.9e-21 104.4 252 32.5
arahy.Tifrunner.gnm1.ann1.8V8SFL Arachis hypogaea HOM05D000237 ORTHO05D006530 1.3e-20 104.0 248 31.5
SalBow7G2018 Salvia bowleyana HOM05D000237 ORTHO05D006530 1.7e-20 103.6 139 44.6
TPR.G4655 Trifolium pratense HOM05D000237 ORTHO05D013217 1.7e-20 103.6 99 52.5
CsaV3_7G022160 Cucumis sativus L. HOM05D000237 ORTHO05D006530 2.2e-20 103.2 237 32.1
Medtr1g029710 Medicago truncatula HOM05D000237 ORTHO05D006530 2.9e-20 102.8 251 31.9
COL.COLO4_07936 Corchorus olitorius HOM05D000237 ORTHO05D006530 3.8e-20 102.4 238 32.8
Glyma.14G155900 Glycine max HOM05D000237 ORTHO05D006530 3.8e-20 102.4 248 32.7
BcaC05g26074 Brassica carinata HOM05D000237 ORTHO05D006530 8.4e-20 101.3 238 32.4
Psat6g040880 Pisum sativum HOM05D000237 ORTHO05D006530 1.9e-19 100.1 247 32.4
C08p20910 Brassica napus HOM05D000237 ORTHO05D006530 3.2e-19 99.4 255 30.2
Thhalv10006523m.g Eutrema salsugineum HOM05D000237 ORTHO05D006530 4.2e-19 99.0 253 30.8
ClCG09G021810 Citrullus lanatus HOM05D000237 ORTHO05D006530 5.5e-19 98.6 222 32.4
THA.LOC104812079 Tarenaya hassleriana HOM05D000237 ORTHO05D006530 9.3e-19 97.8 242 31.4
BolC8t49729H Brassica oleracea HOM05D000237 ORTHO05D006530 1.2e-18 97.4 255 29.8
Carub.0001s2101 Capsella rubella HOM05D000237 ORTHO05D006530 1.2e-18 97.4 253 30.4
PSO170G5097 Papaver somniferum HOM05D000237 ORTHO05D006530 1.2e-18 97.4 246 31.7
Ca_12643_v3 Cicer arietinum L. HOM05D000237 ORTHO05D001145 1.6e-18 97.1 240 31.7
Sopen04g025850 Solanum pennellii HOM05D000237 ORTHO05D006530 1.6e-18 97.1 231 32.9
Ciclev10000009m.g Citrus clementina HOM05D000237 ORTHO05D006530 2.1e-18 96.7 250 31.6
Glyma.13G034600 Glycine max HOM05D000237 ORTHO05D006530 2.1e-18 96.7 248 31.5
ECA232G3457 Erigeron canadensis HOM05D000237 ORTHO05D006530 3.5e-18 95.9 228 33.3
Solyc04g057990.4 Solanum lycopersicum HOM05D000237 ORTHO05D006530 3.5e-18 95.9 231 32.9
Lsat_1_v5_gn_4_135201 Lactuca sativa HOM05D000237 ORTHO05D006530 4.6e-18 95.5 117 46.2
AL1G34720 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 7.9e-18 94.7 253 29.6
A08p28930 Brassica napus HOM05D000987 ORTHO05D006530 1.3e-17 94.0 255 30.6
BraA08t34823Z Brassica rapa HOM05D000237 ORTHO05D006530 1.3e-17 94.0 255 30.6
Sp1g19110 Schrenkiella parvula HOM05D000237 ORTHO05D006530 2.3e-17 93.2 253 30.0
Cpa.g.sc1156.4 Carica papaya HOM05D000237 ORTHO05D006530 3.9e-17 92.4 187 34.8
AT1G21580 Arabidopsis thaliana HOM05D000237 ORTHO05D006530 6.7e-17 91.7 138 37.7
Aqoxy6G00305 Aquilegia oxysepala HOM05D000237 ORTHO05D006530 8.7e-17 91.3 123 42.3
AL2G37460 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 1.9e-16 90.1 193 31.1
TPR.G40837 Trifolium pratense HOM05D000237 ORTHO05D006530 1.9e-16 90.1 118 45.8
CARHR021940 Cardamine hirsuta HOM05D000237 ORTHO05D006530 2.5e-16 89.7 139 37.4
Ah.05g169070 Amaranthus hybridus HOM05D000237 ORTHO05D006530 3.3e-16 89.4 219 30.6
PSO528G0213 Papaver somniferum HOM05D000237 ORTHO05D006530 3.3e-16 89.4 230 32.2
HPP92_004772 Vanilla planifolia HOM05D000237 ORTHO05D006530 1.6e-15 87.0 129 38.8
Gohir.A05G238100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 6.2e-15 85.1 80 52.5
Gohir.D05G240100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 6.2e-15 85.1 80 52.5
ATR1001G008 Amborella trichopoda HOM05D000237 ORTHO05D006530 1.1e-14 84.3 123 39.0
vmacro21123 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 1.4e-14 84.0 189 33.3
arahy.Tifrunner.gnm1.ann1.A7GBNY Arachis hypogaea HOM05D000237 ORTHO05D006530 1.8e-14 83.6 189 31.7
Nn5g28444 Nelumbo nucifera HOM05D000237 ORTHO05D006530 1.8e-14 83.6 247 30.4
Atru.chr13.1586 Acer truncatum HOM05D000237 ORTHO05D006530 2.4e-14 83.2 249 29.7
Nitab4.5_0003485g0030 Nicotiana tabacum HOM05D000237 ORTHO05D006530 2.4e-14 83.2 231 31.2
arahy.Tifrunner.gnm1.ann1.6HV4D5 Arachis hypogaea HOM05D000237 ORTHO05D006530 4.0e-14 82.4 189 31.7
arahy.Tifrunner.gnm1.ann1.S57KMF Arachis hypogaea HOM05D000237 ORTHO05D006530 4.0e-14 82.4 189 31.7
Sc20g0002700 Simmondsia chinensis HOM05D000237 ORTHO05D006530 4.0e-14 82.4 123 39.8
CARHR070760 Cardamine hirsuta HOM05D000237 ORTHO05D006530 6.9e-14 81.6 45 73.3
Os06g0638000 Oryza sativa ssp. japonica HOM05D000237 ORTHO05D006530 6.9e-14 81.6 86 45.3
Sed0005866 Sechium edule HOM05D000237 ORTHO05D006530 9.0e-14 81.3 127 37.8
Haze_17641 Corylus avellana HOM05D000237 ORTHO05D006530 1.2e-13 80.9 247 29.1
Migut.C01070 Erythranthe guttata HOM05D000237 ORTHO05D006530 1.2e-13 80.9 125 39.2
Hund17350 Selenicereus undatus HOM05D000237 ORTHO05D006530 1.5e-13 80.5 189 32.8
SGA_v2.0_scaffold52G18914 Striga asiatica HOM05D000237 ORTHO05D006530 1.5e-13 80.5 239 29.7
Zm00001eb387360 Zea mays HOM05D000237 ORTHO05D006530 4.5e-13 79.0 139 34.5
Nitab4.5_0000317g0120 Nicotiana tabacum HOM05D000237 ORTHO05D006530 7.6e-13 78.2 231 30.7
Cfa018423 Carpinus fangiana HOM05D000237 ORTHO05D001145 3.8e-12 75.9 247 27.1
SMO367G0550 Selaginella moellendorffii HOM05D000237 ORTHO05D006530 3.8e-12 75.9 44 72.7
Cc10_g13690 Coffea canephora HOM05D000237 ORTHO05D006530 2.5e-11 73.2 246 28.9
Duzib116G0766 Durio zibethinus HOM05D000237 ORTHO05D006530 5.5e-11 72.0 251 28.7
PGR044G0116 Punica granatum HOM05D000237 ORTHO05D006530 5.5e-11 72.0 238 28.6
SHI09235 Sapria himalayana HOM05D000237 ORTHO05D006530 5.5e-11 72.0 164 32.3
SEGI_16153 Sequoiadendron giganteum HOM05D000237 ORTHO05D006530 5.5e-11 72.0 41 73.2
Eucgr.E01003 Eucalyptus grandis HOM05D000237 ORTHO05D006530 1.6e-10 70.5 125 36.0
Pp3c2_14590 Physcomitrium patens HOM05D000237 ORTHO05D006530 4.6e-10 68.9 38 71.1
CANSAT25G1894 Cannabis sativa HOM05D000237 ORTHO05D006530 3.9e-09 65.9 126 34.1
Mapoly0097s0070 Marchantia polymorpha HOM05D000237 ORTHO05D006530 3.9e-09 65.9 39 66.7
Lalb_Chr11g0066211 Lupinus albus HOM05D000237 ORTHO05D006530 1.1e-06 57.8 30 83.3


User provided reference genes

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