Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046630.1 Olea europaea HOM05D003766 ORTHO05D004607 0.0e+00 1131.3 722 100.0
Oeu015089.1 Olea europaea HOM05D003766 ORTHO05D004607 3.4e-247 858.6 721 77.0
Rhsim08G0126600 Rhododendron simsii HOM05D003766 ORTHO05D004607 2.0e-210 736.5 735 66.5
Migut.I00296 Erythranthe guttata HOM05D003766 ORTHO05D004607 2.5e-205 719.5 719 62.9
SalBow7G0490 Salvia bowleyana HOM05D003766 ORTHO05D004607 1.4e-203 713.8 719 62.4
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 3.1e-203 712.6 733 61.7
RcHm_v2.0_Chr7g0178271 Rosa chinensis HOM05D003766 ORTHO05D004607 3.7e-201 705.7 713 62.7
MSTRG.11305 Avicennia marina HOM05D003766 ORTHO05D004607 1.9e-197 693.3 721 61.2
Manes.06G005800 Manihot esculenta HOM05D003766 ORTHO05D004607 1.8e-195 686.8 718 63.4
unitig_750.g28512 Utricularia gibba HOM05D003766 ORTHO05D004607 4.0e-195 685.6 713 57.8
Atru.chr9.1710 Acer truncatum HOM05D003766 ORTHO05D004607 5.2e-195 685.3 722 62.9
CAN.G843.53 Capsicum annuum HOM05D003766 ORTHO05D004607 1.5e-194 683.7 722 62.3
Actinidia09075 Actinidia chinensis HOM05D003766 ORTHO05D004607 5.8e-194 681.8 711 60.9
TWI81G0458 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 1.3e-193 680.6 730 60.5
CSS0048248 Camellia sinensis var. sinensis HOM05D003766 ORTHO05D004607 1.7e-193 680.2 717 65.3
DCAR_029422 Daucus carota HOM05D003766 ORTHO05D004607 6.4e-193 678.3 718 59.6
GSVIVG01008448001 Vitis vinifera HOM05D003766 ORTHO05D004607 2.4e-192 676.4 611 69.1
Duzib068G0750 Durio zibethinus HOM05D003766 ORTHO05D004607 3.2e-192 676.0 718 60.7
Cpa.g.sc3.393 Carica papaya HOM05D003766 ORTHO05D004607 1.2e-191 674.1 718 59.1
TWI60G0360 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 3.5e-191 672.5 728 58.4
Sopen03g037630 Solanum pennellii HOM05D003766 ORTHO05D004607 1.0e-190 671.0 723 64.5
Dinv04134 Davidia involucrata HOM05D003766 ORTHO05D004607 1.7e-190 670.2 670 65.5
Ciclev10007659m.g Citrus clementina HOM05D003766 ORTHO05D004607 3.9e-190 669.1 714 59.7
Prupe.5G234000 Prunus persica HOM05D003766 ORTHO05D004607 6.6e-190 668.3 719 62.0
Thecc.03G055500 Theobroma cacao HOM05D003766 ORTHO05D004607 1.1e-189 667.5 713 60.0
Gohir.A11G002900 Gossypium hirsutum HOM05D003766 ORTHO05D004607 1.9e-189 666.8 716 63.1
Gohir.D11G002500 Gossypium hirsutum HOM05D003766 ORTHO05D004607 1.9e-189 666.8 723 62.4
Lj9A419T35 Lonicera japonica HOM05D003766 ORTHO05D004607 1.9e-189 666.8 716 63.5
Ah.14g085990 Amaranthus hybridus HOM05D003766 ORTHO05D004607 2.5e-189 666.4 717 64.7
Solyc03g118670.3 Solanum lycopersicum HOM05D003766 ORTHO05D004607 3.3e-189 666.0 723 64.5
Sc10g0009160 Simmondsia chinensis HOM05D003766 ORTHO05D004607 1.2e-188 664.1 707 62.4
FAN13G1632 Fragaria x ananassa HOM05D003766 ORTHO05D004607 1.6e-188 663.7 716 63.8
Gorai.007G003500 Gossypium raimondii HOM05D003766 ORTHO05D004607 2.8e-188 662.9 723 62.2
MBI19_g04409_MAGBIO Magnolia biondii HOM05D003766 ORTHO05D004607 2.8e-188 662.9 712 57.6
Potri.015G038100 Populus trichocarpa HOM05D003766 ORTHO05D004607 3.6e-188 662.5 722 62.2
MD14G1236800 Malus domestica HOM05D003766 ORTHO05D004607 1.8e-187 660.2 720 60.6
Hund06721 Selenicereus undatus HOM05D003766 ORTHO05D004607 5.2e-187 658.7 729 61.7
EL10Ac8g19505 Beta vulgaris HOM05D003766 ORTHO05D004607 7.5e-186 654.8 705 63.8
Potri.012G046300 Populus trichocarpa HOM05D003766 ORTHO05D004607 7.5e-186 654.8 710 61.8
PGR044G0562 Punica granatum HOM05D003766 ORTHO05D004607 9.9e-186 654.4 713 62.8
Nn3g18290 Nelumbo nucifera HOM05D003766 ORTHO05D004607 1.7e-185 653.7 718 61.1
Lalb_Chr09g0330351 Lupinus albus HOM05D003766 ORTHO05D004607 2.2e-185 653.3 714 62.5
Lj5C158T14 Lonicera japonica HOM05D003766 ORTHO05D004607 6.4e-185 651.7 741 57.4
Aqoxy3G02431 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 1.1e-184 651.0 717 63.2
FAN08G2416 Fragaria x ananassa HOM05D003766 ORTHO05D004607 2.7e-183 646.4 720 58.3
Thhalv10006987m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 6.0e-183 645.2 700 59.4
BolC5t30350H Brassica oleracea HOM05D003766 ORTHO05D004607 1.0e-182 644.4 689 59.9
A06p14270 Brassica napus HOM05D003766 ORTHO05D004607 3.9e-182 642.5 702 59.3
BraA06t24556Z Brassica rapa HOM05D003766 ORTHO05D004607 3.9e-182 642.5 702 59.3
BcaC05g25719 Brassica carinata HOM05D003766 ORTHO05D004607 5.1e-182 642.1 702 59.3
C05p16530 Brassica napus HOM05D003766 ORTHO05D004607 6.6e-182 641.7 702 59.3
FvH4_5g17420 Fragaria vesca HOM05D003766 ORTHO05D004607 6.6e-182 641.7 718 60.4
FAN18G4514 Fragaria x ananassa HOM05D003766 ORTHO05D004607 6.6e-182 641.7 718 60.4
Medtr8g107400 Medicago truncatula HOM05D003766 ORTHO05D004607 6.6e-182 641.7 723 63.8
THA.LOC104813927 Tarenaya hassleriana HOM05D003766 ORTHO05D004607 6.6e-182 641.7 704 58.5
Sp1g16220 Schrenkiella parvula HOM05D003766 ORTHO05D004607 8.6e-182 641.3 700 59.0
Sabra15G0036800 Salix brachista HOM05D003766 ORTHO05D004607 1.5e-181 640.6 719 62.6
arahy.Tifrunner.gnm1.ann1.679W5T Arachis hypogaea HOM05D003766 ORTHO05D004607 3.3e-181 639.4 699 61.9
Eucgr.B00997 Eucalyptus grandis HOM05D003766 ORTHO05D004607 3.3e-181 639.4 712 56.6
QL10p029803 Quercus lobata HOM05D003766 ORTHO05D004607 3.3e-181 639.4 724 61.6
TPR.G1449 Trifolium pratense HOM05D003766 ORTHO05D004607 3.3e-181 639.4 730 60.7
Haze_18860 Corylus avellana HOM05D003766 ORTHO05D004607 4.3e-181 639.0 731 60.3
BcaB07g31816 Brassica carinata HOM05D003766 ORTHO05D004607 5.6e-181 638.6 702 59.0
AL1G30630 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 7.3e-181 638.3 701 58.8
Cfa019652 Carpinus fangiana HOM05D003766 ORTHO05D004607 1.6e-180 637.1 731 60.1
Peaxi162Scf00314g00235 Petunia axillaris HOM05D003766 ORTHO05D004607 2.1e-180 636.7 721 60.9
FAN04G2446 Fragaria x ananassa HOM05D003766 ORTHO05D004607 2.8e-180 636.3 718 60.2
PSO478G2458 Papaver somniferum HOM05D003766 ORTHO05D004607 3.6e-180 636.0 719 59.1
Aa31LG4G3770 Aethionema arabicum HOM05D003766 ORTHO05D004607 1.4e-179 634.0 703 58.3
AUR62042013 Chenopodium quinoa HOM05D003766 ORTHO05D004607 1.4e-179 634.0 698 60.3
Carub.0001s1787 Capsella rubella HOM05D003766 ORTHO05D004607 2.4e-179 633.3 700 58.4
ECA232G0010 Erigeron canadensis HOM05D003766 ORTHO05D004607 2.4e-179 633.3 704 59.2
Ca_17184_v3 Cicer arietinum L. HOM05D003766 ORTHO05D004607 8.9e-179 631.3 718 63.5
CARHR018810 Cardamine hirsuta HOM05D003766 ORTHO05D004607 1.2e-178 630.9 721 57.3
AT1G18260 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 1.5e-178 630.6 710 57.7
PSO017G5688 Papaver somniferum HOM05D003766 ORTHO05D004607 3.4e-178 629.4 719 58.8
AT1G73570 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 4.4e-178 629.0 699 56.1
Glyma.08G054900 Glycine max HOM05D003766 ORTHO05D004607 4.4e-178 629.0 718 59.3
Lalb_Chr05g0221621 Lupinus albus HOM05D003766 ORTHO05D004607 7.6e-178 628.2 703 63.0
Aa31LG7G2830 Aethionema arabicum HOM05D003766 ORTHO05D004607 2.2e-177 626.7 706 57.4
TAR622G0358 Trochodendron aralioides HOM05D003766 ORTHO05D004607 2.9e-177 626.3 705 56.6
Psat4g000160 Pisum sativum HOM05D003766 ORTHO05D004607 2.4e-176 623.2 726 59.4
Cc04_g06210 Coffea canephora HOM05D003766 ORTHO05D004607 3.2e-176 622.9 618 61.7
Aqoxy3G00054 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 5.4e-176 622.1 711 58.6
arahy.Tifrunner.gnm1.ann1.G74QKM Arachis hypogaea HOM05D003766 ORTHO05D004607 7.1e-176 621.7 725 59.6
Thhalv10018231m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 9.2e-176 621.3 705 57.3
Lsat_1_v5_gn_0_34021 Lactuca sativa HOM05D003766 ORTHO05D004607 1.2e-175 620.9 697 63.0
Phvul.002G330600 Phaseolus vulgaris HOM05D003766 ORTHO05D004607 1.2e-175 620.9 689 65.2
Sed0009438 Sechium edule HOM05D003766 ORTHO05D004607 1.3e-174 617.5 726 55.2
Lj4g0008657 Lotus japonicus HOM05D003766 ORTHO05D004607 2.3e-174 616.7 715 56.5
AL2G33320 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 1.5e-173 614.0 702 56.8
Glyma.05G246700 Glycine max HOM05D003766 ORTHO05D004607 1.9e-173 613.6 718 63.2
VMungo0251G1288 Vigna mungo HOM05D003766 ORTHO05D004607 1.9e-173 613.6 716 61.7
CARHR066590 Cardamine hirsuta HOM05D003766 ORTHO05D004607 9.6e-173 611.3 705 56.3
ClCG04G010600 Citrullus lanatus HOM05D003766 ORTHO05D004607 1.2e-172 610.9 711 55.8
Sabra12G0032400 Salix brachista HOM05D003766 ORTHO05D004607 1.6e-172 610.5 748 59.5
HanXRQChr15g0492431 Helianthus annuus HOM05D003766 ORTHO05D004607 1.1e-171 607.8 701 57.8
MELO3C002135.2 Cucumis melo HOM05D003766 ORTHO05D004607 4.4e-170 602.4 723 54.9
CsaV3_1G007190 Cucumis sativus L. HOM05D003766 ORTHO05D004607 5.8e-170 602.1 723 55.2
Atru.chr9.1724 Acer truncatum HOM05D003766 ORTHO05D004607 3.8e-169 599.4 660 61.7
HanXRQChr17g0545731 Helianthus annuus HOM05D003766 ORTHO05D004607 5.6e-165 585.5 670 56.7
AUR62043006 Chenopodium quinoa HOM05D003766 ORTHO05D004607 1.6e-164 583.9 602 62.0
Sp5g28730 Schrenkiella parvula HOM05D003766 ORTHO05D004607 4.0e-163 579.3 699 58.4
ATR0753G133 Amborella trichopoda HOM05D003766 ORTHO05D004607 1.7e-161 573.9 714 56.6
CDE05G3381 Ceratophyllum demersum HOM05D003766 ORTHO05D004607 7.1e-160 568.5 709 55.4
HPP92_011105 Vanilla planifolia HOM05D003766 ORTHO05D004607 2.8e-156 556.6 712 57.9
Nitab4.5_0003401g0020 Nicotiana tabacum HOM05D003766 ORTHO05D004607 2.4e-155 553.5 720 57.5
CiPaw.16G093700 Carya illinoinensis HOM05D003766 ORTHO05D004607 4.5e-154 549.3 713 52.5
SEGI_38105 Sequoiadendron giganteum HOM05D003766 ORTHO05D004607 2.5e-152 543.5 718 53.9
CiPaw.15G143700 Carya illinoinensis HOM05D003766 ORTHO05D004607 3.0e-150 536.6 576 66.1
Eucgr.B00877 Eucalyptus grandis HOM05D003766 ORTHO05D004607 4.2e-144 516.2 624 55.6
Nitab4.5_0004556g0010 Nicotiana tabacum HOM05D003766 ORTHO05D004607 1.6e-143 514.2 775 52.5
Zm00001eb011300 Zea mays HOM05D003766 ORTHO05D004607 2.2e-137 493.8 656 48.8
MD06G1227600 Malus domestica HOM05D003766 ORTHO05D004607 4.2e-136 489.6 573 56.2
Oeu026275.1 Olea europaea HOM05D003766 ORTHO05D004607 7.2e-136 488.8 552 65.8
Mapoly0093s0082 Marchantia polymorpha HOM05D003766 ORTHO05D004607 3.2e-128 463.4 737 47.5
Pp3c19_13490 Physcomitrium patens HOM05D003766 ORTHO05D004607 1.6e-127 461.1 717 47.0
Manes.06G005600 Manihot esculenta HOM05D003766 ORTHO05D004607 1.7e-124 451.1 573 55.5
Sed0018638 Sechium edule HOM05D003766 ORTHO05D004607 4.7e-119 433.0 572 51.6
SMO228G0037 Selaginella moellendorffii HOM05D003766 ORTHO05D004607 2.3e-118 430.6 727 42.5
Pp3c22_10650 Physcomitrium patens HOM05D003766 ORTHO05D004607 2.0e-117 427.6 677 46.8
HanXRQChr14g0456281 Helianthus annuus HOM05D003766 ORTHO05D004607 1.1e-115 421.8 615 46.7
vmacro17777 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 2.6e-109 400.6 341 72.1
vmacro17776 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 7.2e-104 382.5 302 67.5
Pp3c19_15130 Physcomitrium patens HOM05D003766 ORTHO05D004607 1.8e-102 377.9 559 50.1
Carub.0002s2031 Capsella rubella HOM05D003766 ORTHO05D004607 8.8e-102 375.6 508 42.7
TAR629G0485 Trochodendron aralioides HOM05D003766 ORTHO05D004607 1.9e-96 357.8 295 62.7
TAR629G3071 Trochodendron aralioides HOM05D003766 ORTHO05D004607 4.7e-95 353.2 248 71.0
Aqoxy3G00039 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 7.5e-85 319.3 524 48.7
AagrBONN_evm.TU.Sc2ySwM_228.854 Anthoceros agrestis HOM05D003766 ORTHO05D004607 6.4e-84 316.2 523 51.8
COL.COLO4_04795 Corchorus olitorius HOM05D003766 ORTHO05D004607 4.3e-80 303.5 205 83.9
BcaC04g22654 Brassica carinata HOM05D003766 ORTHO05D004607 3.9e-73 280.4 230 65.2
Zm00001eb398230 Zea mays HOM05D003766 ORTHO05D004607 3.9e-73 280.4 296 52.7
BcaC07g36877 Brassica carinata HOM05D003766 ORTHO05D004607 1.4e-70 271.9 286 55.6
Atru.chr9.1718 Acer truncatum HOM05D003766 ORTHO05D004607 1.5e-64 251.9 230 75.2
BcaB05g24801 Brassica carinata HOM05D003766 ORTHO05D004607 2.6e-61 241.1 243 50.6
HPP92_011088 Vanilla planifolia HOM05D003766 ORTHO05D004607 1.4e-59 235.3 332 55.4
BolC2t09163H Brassica oleracea HOM05D003766 ORTHO05D004607 3.0e-57 227.6 368 49.7
BolC7t40944H Brassica oleracea HOM05D003766 ORTHO05D004607 1.5e-56 225.3 138 81.2
C02p31190 Brassica napus HOM05D003766 ORTHO05D004607 1.6e-55 221.9 295 46.4
Psat4g000240 Pisum sativum HOM05D003766 ORTHO05D004607 2.1e-55 221.5 291 46.7
C09p56670 Brassica napus HOM05D003766 ORTHO05D004607 6.2e-47 193.4 111 86.5
QL10p029813 Quercus lobata HOM05D003766 ORTHO05D004607 8.1e-47 193.0 300 43.3
HPP92_011087 Vanilla planifolia HOM05D003766 ORTHO05D004607 5.8e-45 186.8 222 46.4
BolC1t04841H Brassica oleracea HOM05D003766 ORTHO05D004607 9.9e-45 186.0 111 83.8
Actinidia35129 Actinidia chinensis HOM05D003766 ORTHO05D004607 4.0e-38 164.1 338 53.3
Dinv12692 Davidia involucrata HOM05D003766 ORTHO05D004607 5.8e-37 160.2 85 82.4
COL.COLO4_04913 Corchorus olitorius HOM05D003766 ORTHO05D004607 2.1e-34 151.8 186 52.2
QL10p030223 Quercus lobata HOM05D003766 ORTHO05D004607 3.5e-34 151.0 166 51.2
Hma1.2p1_0759F.1_g213970 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.4e-27 129.0 95 65.3
C02p31200 Brassica napus HOM05D003766 ORTHO05D004607 5.5e-27 127.1 123 49.6
CBR_g40334 Chara braunii HOM05D000019 ORTHO05D000002 7.2e-27 126.7 102 58.8
Hma1.2p1_0502F.1_g167690 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 2.1e-26 125.2 107 57.9
Hma1.2p1_2524F.1_g323905 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 2.7e-26 124.8 98 61.2
Hma1.2p1_0127F.1_g059480 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 3.5e-26 124.4 98 63.3
Cre03.g197400 Chlamydomonas reinhardtii HOM05D003766 ORTHO05D004607 2.2e-23 115.2 615 31.7
C08p01510 Brassica napus HOM05D003766 ORTHO05D004607 1.4e-19 102.4 69 71.0
Oeu002213.1 Olea europaea HOM05D003766 ORTHO05D004607 5.5e-19 100.5 165 42.4
MCO08G236 Micromonas commoda HOM05D003766 ORTHO05D004607 3.0e-17 94.7 172 36.0
BraA05t20732Z Brassica rapa HOM05D003766 ORTHO05D004607 1.3e-15 89.4 68 60.3
BolC9t56024H Brassica oleracea HOM05D021712 ORTHO05D021656 4.8e-15 87.4 64 62.5
A05p35970 Brassica napus HOM05D003766 ORTHO05D004607 2.4e-14 85.1 63 61.9
Sp5g28740 Schrenkiella parvula HOM05D000408 ORTHO05D004607 1.5e-13 82.4 161 33.5
C09p31690 Brassica napus HOM05D021712 ORTHO05D021656 7.7e-13 80.1 66 56.1
PRCOL_00002904 Prasinoderma coloniale HOM05D003766 ORTHO05D004607 1.3e-12 79.3 195 29.2
Hma1.2p1_0478F.1_g161250 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 2.2e-12 78.6 68 54.4
Cfa023117 Carpinus fangiana HOM05D016742 ORTHO05D028589 1.9e-11 75.5 169 32.0
CBR_g40333 Chara braunii HOM05D003766 ORTHO05D004607 9.4e-11 73.2 117 39.3
A02p21490 Brassica napus HOM05D021712 ORTHO05D021656 2.7e-10 71.6 124 37.9
C07p05430 Brassica napus HOM05D003766 ORTHO05D016749 4.7e-10 70.9 49 65.3
A05p18420 Brassica napus HOM05D017138 ORTHO05D016749 1.4e-09 69.3 50 62.0
Oeu049536.1 Olea europaea HOM05D003766 ORTHO05D004607 6.7e-09 67.0 197 31.5
Hma1.2p1_0632F.1_g192420 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.5e-08 65.9 54 51.9
CAN.G664.4 Capsicum annuum HOM05D003766 ORTHO05D004607 4.4e-08 64.3 37 73.0
BcaC04g21445 Brassica carinata HOM05D000349 ORTHO05D001782 1.3e-07 62.8 51 60.8
BraA05t22403Z Brassica rapa HOM05D003766 ORTHO05D004607 2.2e-07 62.0 44 63.6
Glyma.15G140700 Glycine max HOM05D003766 ORTHO05D004607 6.3e-07 60.5 72 40.3
A02p18790 Brassica napus HOM05D003766 ORTHO05D004607 8.2e-07 60.1 38 68.4
EL10Ac8g19330 Beta vulgaris HOM05D003766 ORTHO05D004607 7.0e-06 57.0 68 45.6


User provided reference genes

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