Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046590.2 Olea europaea HOM05D004611 ORTHO05D005794 5.6e-187 657.5 345 100.0
Oeu045271.1 Olea europaea HOM05D004611 ORTHO05D005794 5.0e-127 458.4 384 71.6
Migut.N00024 Erythranthe guttata HOM05D004611 ORTHO05D005794 2.9e-95 352.8 421 53.7
SGA_v2.0_scaffold123G33405 Striga asiatica HOM05D004611 ORTHO05D005794 8.5e-95 351.3 416 54.1
MSTRG.21753 Avicennia marina HOM05D004611 ORTHO05D005794 9.8e-91 337.8 420 51.9
Lj6A696G31 Lonicera japonica HOM05D004611 ORTHO05D005794 1.7e-90 337.0 421 51.8
CSS0006805 Camellia sinensis var. sinensis HOM05D004611 ORTHO05D005794 1.4e-89 334.0 444 49.1
QL06p013322 Quercus lobata HOM05D004611 ORTHO05D005794 5.4e-89 332.0 440 48.4
Actinidia02513 Actinidia chinensis HOM05D004611 ORTHO05D005794 9.1e-89 331.3 440 48.4
DCAR_030442 Daucus carota HOM05D004611 ORTHO05D005794 2.0e-88 330.1 410 51.7
Sopen01g023170 Solanum pennellii HOM05D004611 ORTHO05D005794 7.7e-88 328.2 439 49.9
Nitab4.5_0000062g0520 Nicotiana tabacum HOM05D004611 ORTHO05D005794 1.7e-87 327.0 399 52.1
Thecc.04G307400 Theobroma cacao HOM05D004611 ORTHO05D005794 2.2e-87 326.6 413 52.8
PGSC0003DMG402001235 Solanum tuberosum HOM05D004611 ORTHO05D005794 1.1e-86 324.3 439 49.4
Gorai.005G069100 Gossypium raimondii HOM05D004611 ORTHO05D005794 1.5e-86 323.9 412 50.7
Gohir.D02G061400 Gossypium hirsutum HOM05D004611 ORTHO05D005794 2.5e-86 323.2 412 50.7
Gohir.A02G056200 Gossypium hirsutum HOM05D004611 ORTHO05D005794 3.2e-86 322.8 412 51.2
vmacro15164 Vaccinium macrocarpon HOM05D004611 ORTHO05D005794 4.2e-86 322.4 441 50.1
TWI73G0848 Tripterygium wilfordii HOM05D004611 ORTHO05D005794 9.5e-86 321.2 418 51.0
Nitab4.5_0003678g0010 Nicotiana tabacum HOM05D004611 ORTHO05D005794 2.1e-85 320.1 433 48.5
Rhsim02G0001700 Rhododendron simsii HOM05D004611 ORTHO05D005794 2.8e-85 319.7 443 48.3
Lj6g0013514 Lotus japonicus HOM05D004611 ORTHO05D005794 3.6e-85 319.3 400 52.0
Solyc01g057840.3 Solanum lycopersicum HOM05D004611 ORTHO05D005794 3.6e-85 319.3 412 51.7
THA.LOC104818864 Tarenaya hassleriana HOM05D004611 ORTHO05D005794 3.6e-85 319.3 376 52.4
Manes.03G208700 Manihot esculenta HOM05D004611 ORTHO05D005794 1.0e-84 317.8 424 49.1
CiPaw.02G072100 Carya illinoinensis HOM05D004611 ORTHO05D005794 1.8e-84 317.0 445 47.9
Potri.008G101200 Populus trichocarpa HOM05D004611 ORTHO05D005794 1.8e-84 317.0 418 49.8
COL.COLO4_34558 Corchorus olitorius HOM05D004611 ORTHO05D005794 3.0e-84 316.2 386 51.8
Sabra08G0076500 Salix brachista HOM05D004611 ORTHO05D005794 5.2e-84 315.5 413 49.2
Carub.0008s0980 Capsella rubella HOM05D004611 ORTHO05D005794 6.8e-84 315.1 383 51.7
CAN.G179.3 Capsicum annuum HOM05D004611 ORTHO05D005794 6.8e-84 315.1 434 48.4
BcaB01g02933 Brassica carinata HOM05D004611 ORTHO05D005794 8.8e-84 314.7 395 49.4
BcaC01g04844 Brassica carinata HOM05D004611 ORTHO05D005794 8.8e-84 314.7 391 49.4
C03p33270 Brassica napus HOM05D004611 ORTHO05D005794 1.2e-83 314.3 391 49.4
AL8G23880 Arabidopsis lyrata HOM05D004611 ORTHO05D005794 3.4e-83 312.8 376 51.1
RcHm_v2.0_Chr4g0426211 Rosa chinensis HOM05D004611 ORTHO05D005794 3.4e-83 312.8 424 49.5
Eucgr.H04083 Eucalyptus grandis HOM05D004611 ORTHO05D005794 5.7e-83 312.0 406 50.7
BolC3t15649H Brassica oleracea HOM05D004611 ORTHO05D005794 1.3e-82 310.8 392 49.5
Cfa015689 Carpinus fangiana HOM05D004611 ORTHO05D005794 1.7e-82 310.5 444 46.8
arahy.Tifrunner.gnm1.ann1.J0E0JD Arachis hypogaea HOM05D004611 ORTHO05D005794 2.2e-82 310.1 352 55.4
A03p27560 Brassica napus HOM05D004611 ORTHO05D005794 2.2e-82 310.1 394 49.0
BraA03t11969Z Brassica rapa HOM05D004611 ORTHO05D005794 2.2e-82 310.1 393 48.9
GSVIVG01034941001 Vitis vinifera HOM05D004611 ORTHO05D005794 2.2e-82 310.1 262 67.6
arahy.Tifrunner.gnm1.ann1.VX19JK Arachis hypogaea HOM05D004611 ORTHO05D005794 4.9e-82 308.9 405 51.4
VMungo0540G0237 Vigna mungo HOM05D004611 ORTHO05D005794 6.3e-82 308.5 342 57.0
CANSAT78G0742 Cannabis sativa HOM05D004611 ORTHO05D005794 8.3e-82 308.1 454 46.5
Ciclev10004185m.g Citrus clementina HOM05D004611 ORTHO05D005794 1.1e-81 307.8 423 48.5
Duzib151G0109 Durio zibethinus HOM05D004611 ORTHO05D005794 1.4e-81 307.4 411 49.4
PGR004G0015 Punica granatum HOM05D004611 ORTHO05D005794 1.8e-81 307.0 426 49.1
AT5G49930 Arabidopsis thaliana HOM05D004611 ORTHO05D005794 2.4e-81 306.6 374 49.7
MELO3C021251.2 Cucumis melo HOM05D004611 ORTHO05D005794 2.4e-81 306.6 420 49.3
Prupe.1G111500 Prunus persica HOM05D004611 ORTHO05D005794 3.1e-81 306.2 436 47.0
FAN07G0444 Fragaria x ananassa HOM05D004611 ORTHO05D005794 4.1e-81 305.8 426 47.7
Lalb_Chr18g0058501 Lupinus albus HOM05D004611 ORTHO05D005794 4.1e-81 305.8 394 50.8
AUR62030016 Chenopodium quinoa HOM05D004611 ORTHO05D005794 5.4e-81 305.4 390 51.5
Nn8g40813 Nelumbo nucifera HOM05D004611 ORTHO05D005794 7.0e-81 305.1 431 46.6
Sp6g11490 Schrenkiella parvula HOM05D004611 ORTHO05D005794 7.0e-81 305.1 397 47.6
Sed0020756 Sechium edule HOM05D004611 ORTHO05D005794 1.2e-80 304.3 388 52.1
Cc03_g00470 Coffea canephora HOM05D004611 ORTHO05D005794 2.0e-80 303.5 422 48.1
Glyma.15G136900 Glycine max HOM05D004611 ORTHO05D005794 2.0e-80 303.5 364 54.1
ATR0693G069 Amborella trichopoda HOM05D004611 ORTHO05D005794 2.7e-80 303.1 415 48.9
ClCG06G004360 Citrullus lanatus HOM05D004611 ORTHO05D005794 4.5e-80 302.4 420 49.3
Haze_00831 Corylus avellana HOM05D004611 ORTHO05D005794 4.5e-80 302.4 438 46.3
EL10Ac3g06291 Beta vulgaris HOM05D004611 ORTHO05D005794 7.8e-80 301.6 341 53.4
CsaV3_6G000020 Cucumis sativus L. HOM05D004611 ORTHO05D005794 1.7e-79 300.4 420 48.8
Glyma.09G031900 Glycine max HOM05D004611 ORTHO05D005794 1.7e-79 300.4 456 47.4
HanXRQChr11g0353941 Helianthus annuus HOM05D004611 ORTHO05D005794 2.3e-79 300.1 427 49.6
CARHR258790 Cardamine hirsuta HOM05D004611 ORTHO05D005794 2.9e-79 299.7 372 50.8
Ah.07g203900 Amaranthus hybridus HOM05D004611 ORTHO05D005794 8.6e-79 298.1 417 48.4
AUR62002591 Chenopodium quinoa HOM05D004611 ORTHO05D005794 1.5e-78 297.4 390 49.7
Thhalv10012510m.g Eutrema salsugineum HOM05D004611 ORTHO05D005794 3.3e-78 296.2 399 47.9
Phvul.006G121000 Phaseolus vulgaris HOM05D004611 ORTHO05D005794 7.3e-78 295.0 431 48.0
Aqoxy2G02628 Aquilegia oxysepala HOM05D004611 ORTHO05D005794 1.2e-77 294.3 414 48.1
Psat1g162720 Pisum sativum HOM05D004611 ORTHO05D005794 1.2e-77 294.3 440 47.5
Aa31LG3G6800 Aethionema arabicum HOM05D004611 ORTHO05D005794 1.6e-77 293.9 368 51.4
FvH4_4g20770 Fragaria vesca HOM05D004611 ORTHO05D005794 1.6e-77 293.9 426 46.9
FAN12G0652 Fragaria x ananassa HOM05D004611 ORTHO05D005794 1.6e-77 293.9 426 46.9
Ca_00946_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 3.6e-77 292.7 441 48.1
Ca_00952_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 3.6e-77 292.7 441 48.1
MD13G1148000 Malus domestica HOM05D004611 ORTHO05D005794 4.0e-76 289.3 456 44.3
unitig_746.g26902 Utricularia gibba HOM05D004611 ORTHO05D005794 5.2e-76 288.9 407 46.2
Lsat_1_v5_gn_1_40220 Lactuca sativa HOM05D004611 ORTHO05D005794 4.4e-75 285.8 408 47.8
MD16G1147800 Malus domestica HOM05D004611 ORTHO05D005794 4.4e-75 285.8 454 44.5
Atru.chr4.3104 Acer truncatum HOM05D004611 ORTHO05D005794 1.3e-74 284.3 422 47.2
PSO541G3737 Papaver somniferum HOM05D004611 ORTHO05D005794 2.0e-72 276.9 422 44.3
ECA247G1486 Erigeron canadensis HOM05D004611 ORTHO05D005794 1.3e-71 274.2 421 46.1
Os12g0564600 Oryza sativa ssp. japonica HOM05D004611 ORTHO05D005794 1.7e-71 273.9 404 44.8
PSO675G3276 Papaver somniferum HOM05D004611 ORTHO05D005794 1.7e-71 273.9 418 44.7
DCAR_002526 Daucus carota HOM05D004611 ORTHO05D005794 5.0e-71 272.3 435 45.3
Peaxi162Scf00126g01512 Petunia axillaris HOM05D004611 ORTHO05D005794 9.5e-70 268.1 446 41.9
MBI19_g32689_MAGBIO Magnolia biondii HOM05D004611 ORTHO05D005794 3.6e-69 266.2 322 51.6
Sc25g0001590 Simmondsia chinensis HOM05D004611 ORTHO05D005794 3.2e-65 253.1 341 49.3
TPR.G10113 Trifolium pratense HOM05D004611 ORTHO05D005794 4.1e-65 252.7 336 48.5
Zm00001eb136770 Zea mays HOM05D004611 ORTHO05D005794 7.8e-64 248.4 450 40.0
CDE02G2799 Ceratophyllum demersum HOM05D004611 ORTHO05D005794 1.1e-62 244.6 240 56.7
TAR362G0625 Trochodendron aralioides HOM05D004611 ORTHO05D005794 3.4e-59 233.0 190 66.8
Cpa.g.sc146.70 Carica papaya HOM05D004611 ORTHO05D005794 5.1e-55 219.2 229 57.2
AagrBONN_evm.TU.Sc2ySwM_344.977 Anthoceros agrestis HOM05D004611 ORTHO05D005794 1.4e-49 201.1 434 35.5
Mapoly0029s0152 Marchantia polymorpha HOM05D004611 ORTHO05D005794 7.1e-49 198.7 470 33.0
Pp3c6_29680 Physcomitrium patens HOM05D004611 ORTHO05D005794 3.5e-48 196.4 417 34.8
SMO356G0321 Selaginella moellendorffii HOM05D004611 ORTHO05D005794 2.1e-45 187.2 318 42.1
FAN17G1213 Fragaria x ananassa HOM05D004611 ORTHO05D005794 1.5e-43 181.0 351 41.0
CBR_g49302 Chara braunii HOM05D004611 ORTHO05D005794 5.4e-41 172.6 276 39.9
SEGI_12646 Sequoiadendron giganteum HOM05D004611 ORTHO05D005794 2.5e-30 137.1 314 34.7
SMO356G0656 Selaginella moellendorffii HOM05D004611 ORTHO05D005794 5.6e-30 136.0 119 61.3
CANSAT35G0087 Cannabis sativa HOM05D004611 ORTHO05D005794 2.8e-29 133.7 168 48.8
SMO356G0045 Selaginella moellendorffii HOM05D004611 ORTHO05D005794 1.9e-25 120.9 127 50.4
TPR.G31403 Trifolium pratense HOM05D004611 ORTHO05D005794 1.6e-21 107.8 68 76.5
HanXRQChr06g0164931 Helianthus annuus HOM05D004611 ORTHO05D005794 4.8e-21 106.3 73 76.7
Cre17.g734961 Chlamydomonas reinhardtii HOM05D004611 ORTHO05D005794 1.8e-20 104.4 113 46.9
HanXRQChr04g0096671 Helianthus annuus HOM05D004611 ORTHO05D005794 1.3e-18 98.2 71 73.2
PRCOL_00000926 Prasinoderma coloniale HOM05D004611 ORTHO05D005794 8.4e-18 95.5 127 40.2
TPR.G40539 Trifolium pratense HOM05D004611 ORTHO05D005794 8.7e-15 85.5 159 42.1
TAR362G1323 Trochodendron aralioides HOM05D004611 ORTHO05D005794 2.5e-14 84.0 173 37.6
HPP92_010928 Vanilla planifolia HOM05D004611 ORTHO05D005794 1.3e-13 81.6 199 37.2
Dinv15127 Davidia involucrata HOM05D004611 ORTHO05D005794 8.2e-13 79.0 161 39.1
GSVIVG01017626001 Vitis vinifera HOM05D004611 ORTHO05D005794 7.9e-08 62.4 125 39.2


User provided reference genes

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