Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046548.1 Olea europaea HOM05D005404 ORTHO05D006623 7.3e-43 177.2 115 100.0
Oeu012458.1 Olea europaea HOM05D005404 ORTHO05D006623 9.3e-38 160.2 115 93.0
SGA_v2.0_scaffold333G49013 Striga asiatica HOM05D005404 ORTHO05D006623 2.5e-35 152.1 115 74.8
COL.COLO4_07492 Corchorus olitorius HOM05D005404 ORTHO05D006623 5.6e-35 151.0 114 75.4
Hund21493 Selenicereus undatus HOM05D005404 ORTHO05D006623 9.6e-35 150.2 114 74.6
SalBow7G3345 Salvia bowleyana HOM05D005404 ORTHO05D006623 2.1e-34 149.1 115 81.7
Cc00_g15980 Coffea canephora HOM05D005404 ORTHO05D006623 3.7e-34 148.3 114 74.6
Duzib101G0001 Durio zibethinus HOM05D005404 ORTHO05D006623 3.7e-34 148.3 114 73.7
Duzib192G1075 Durio zibethinus HOM05D005404 ORTHO05D006623 3.7e-34 148.3 114 73.7
Nitab4.5_0000206g0130 Nicotiana tabacum HOM05D005404 ORTHO05D006623 3.7e-34 148.3 114 72.8
Thecc.06G156200 Theobroma cacao HOM05D005404 ORTHO05D006623 3.7e-34 148.3 114 73.7
Potri.001G352600 Populus trichocarpa HOM05D005404 ORTHO05D006623 4.8e-34 147.9 114 73.7
Solyc02g071150.3 Solanum lycopersicum HOM05D005404 ORTHO05D006623 4.8e-34 147.9 114 72.8
Sopen02g020230 Solanum pennellii HOM05D005404 ORTHO05D006623 4.8e-34 147.9 114 72.8
MSTRG.16208 Avicennia marina HOM05D005404 ORTHO05D006623 6.2e-34 147.5 115 73.9
Manes.15G118100 Manihot esculenta HOM05D005404 ORTHO05D006623 8.1e-34 147.1 114 83.3
PSO017G4964 Papaver somniferum HOM05D005404 ORTHO05D006623 8.1e-34 147.1 114 72.8
Rhsim02G0154900 Rhododendron simsii HOM05D005404 ORTHO05D006623 8.1e-34 147.1 114 72.8
Gohir.A10G038300 Gossypium hirsutum HOM05D005404 ORTHO05D006623 1.1e-33 146.7 114 72.8
Gohir.D10G039300 Gossypium hirsutum HOM05D005404 ORTHO05D006623 1.1e-33 146.7 114 72.8
Gorai.011G041300 Gossypium raimondii HOM05D005404 ORTHO05D006623 1.1e-33 146.7 114 72.8
Peaxi162Scf00482g00049 Petunia axillaris HOM05D005404 ORTHO05D006623 1.1e-33 146.7 114 72.8
CiPaw.09G128300 Carya illinoinensis HOM05D005404 ORTHO05D006623 1.4e-33 146.4 114 75.4
Dinv32291 Davidia involucrata HOM05D005404 ORTHO05D006623 1.4e-33 146.4 114 80.7
VMungo0251G2631 Vigna mungo HOM05D005404 ORTHO05D006623 1.8e-33 146.0 114 71.9
EL10Ac8g19776 Beta vulgaris HOM05D005404 ORTHO05D006623 2.4e-33 145.6 114 72.8
TAR626G1892 Trochodendron aralioides HOM05D005404 ORTHO05D006623 2.4e-33 145.6 114 71.1
Duzib235G1537 Durio zibethinus HOM05D005404 ORTHO05D006623 3.1e-33 145.2 114 71.9
PSO170G1289 Papaver somniferum HOM05D005404 ORTHO05D006623 3.1e-33 145.2 114 71.9
GSVIVG01021395001 Vitis vinifera HOM05D005404 ORTHO05D006623 3.1e-33 145.2 114 71.9
Duzib160G0646 Durio zibethinus HOM05D005404 ORTHO05D006623 4.0e-33 144.8 114 71.1
Atru.chr10.1368 Acer truncatum HOM05D005404 ORTHO05D006623 5.3e-33 144.4 114 79.8
arahy.Tifrunner.gnm1.ann1.HITJ74 Arachis hypogaea HOM05D005404 ORTHO05D006623 6.9e-33 144.1 114 71.1
HanXRQChr11g0340931 Helianthus annuus HOM05D005404 ORTHO05D006623 6.9e-33 144.1 114 72.8
MBI07_g07833_MAGBIO Magnolia biondii HOM05D005404 ORTHO05D006623 6.9e-33 144.1 114 70.2
Actinidia39556 Actinidia chinensis HOM05D005404 ORTHO05D006623 9.0e-33 143.7 114 81.6
Ciclev10017167m.g Citrus clementina HOM05D005404 ORTHO05D006623 9.0e-33 143.7 115 72.2
Sed0003587 Sechium edule HOM05D005404 ORTHO05D006623 9.0e-33 143.7 114 71.9
CANSAT35G0205 Cannabis sativa HOM05D005404 ORTHO05D006623 1.5e-32 142.9 114 70.2
Eucgr.E02375 Eucalyptus grandis HOM05D005404 ORTHO05D006623 1.5e-32 142.9 114 70.2
unitig_26.g10094 Utricularia gibba HOM05D005404 ORTHO05D006623 1.5e-32 142.9 115 71.3
Aqoxy4G00127 Aquilegia oxysepala HOM05D005404 ORTHO05D006623 2.0e-32 142.5 115 72.2
Lj2A310T44 Lonicera japonica HOM05D005404 ORTHO05D006623 2.0e-32 142.5 114 84.2
Nn3g20867 Nelumbo nucifera HOM05D005404 ORTHO05D006623 2.0e-32 142.5 115 82.6
QL05p060078 Quercus lobata HOM05D005404 ORTHO05D006623 2.0e-32 142.5 114 82.5
CDE02G1967 Ceratophyllum demersum HOM05D005404 ORTHO05D006623 2.6e-32 142.1 114 80.7
Lalb_Chr12g0208831 Lupinus albus HOM05D005404 ORTHO05D006623 3.4e-32 141.7 114 73.7
Sc05g0006520 Simmondsia chinensis HOM05D005404 ORTHO05D006623 3.4e-32 141.7 114 71.9
MELO3C007159.2 Cucumis melo HOM05D005404 ORTHO05D006623 4.5e-32 141.4 114 70.2
CsaV3_6G051470 Cucumis sativus L. HOM05D005404 ORTHO05D006623 4.5e-32 141.4 114 70.2
Ca_18287_v3 Cicer arietinum L. HOM05D005404 ORTHO05D006623 5.8e-32 141.0 114 69.3
Haze_05531 Corylus avellana HOM05D005404 ORTHO05D006623 5.8e-32 141.0 114 71.9
Lj4g0012372 Lotus japonicus HOM05D005404 ORTHO05D006623 5.8e-32 141.0 114 69.3
TWI53G0717 Tripterygium wilfordii HOM05D005404 ORTHO05D006623 5.8e-32 141.0 116 70.7
Migut.H01386 Erythranthe guttata HOM05D005404 ORTHO05D006623 1.7e-31 139.4 116 71.6
FAN11G2394 Fragaria x ananassa HOM05D005404 ORTHO05D006623 1.7e-31 139.4 117 70.9
PGR042G3093 Punica granatum HOM05D005404 ORTHO05D006623 1.7e-31 139.4 114 69.3
DCAR_003948 Daucus carota HOM05D005404 ORTHO05D006623 2.2e-31 139.0 115 71.3
DCAR_007905 Daucus carota HOM05D005404 ORTHO05D006623 2.2e-31 139.0 115 71.3
Phvul.002G197500 Phaseolus vulgaris HOM05D005404 ORTHO05D006623 2.2e-31 139.0 114 69.3
TWI09G1218 Tripterygium wilfordii HOM05D005404 ORTHO05D006623 2.9e-31 138.7 110 78.2
FAN21G0592 Fragaria x ananassa HOM05D005404 ORTHO05D006623 3.8e-31 138.3 117 70.1
MD05G1290500 Malus domestica HOM05D005404 ORTHO05D006623 3.8e-31 138.3 118 69.5
Manes.17G066000 Manihot esculenta HOM05D005404 ORTHO05D006623 3.8e-31 138.3 114 76.3
Glyma.05G127400 Glycine max HOM05D005404 ORTHO05D006623 4.9e-31 137.9 115 69.6
Carub.0001s2809 Capsella rubella HOM05D005404 ORTHO05D006623 8.4e-31 137.1 113 69.0
MD16G1202800 Malus domestica HOM05D005404 ORTHO05D006623 8.4e-31 137.1 118 68.6
Psat7g091480 Pisum sativum HOM05D005404 ORTHO05D006623 8.4e-31 137.1 114 67.5
Prupe.4G075200 Prunus persica HOM05D005404 ORTHO05D006623 1.1e-30 136.7 118 67.8
Glyma.08G082100 Glycine max HOM05D005404 ORTHO05D006623 1.9e-30 136.0 115 68.7
TAR627G1065 Trochodendron aralioides HOM05D005404 ORTHO05D006623 1.9e-30 136.0 108 72.2
BcaB07g32570 Brassica carinata HOM05D005404 ORTHO05D006623 2.5e-30 135.6 116 68.1
CDE08G1548 Ceratophyllum demersum HOM05D005404 ORTHO05D006623 2.5e-30 135.6 110 70.0
ECA248G0679 Erigeron canadensis HOM05D005404 ORTHO05D006623 3.2e-30 135.2 114 79.8
THA.LOC104812663 Tarenaya hassleriana HOM05D005404 ORTHO05D006623 5.5e-30 134.4 113 68.1
BcaC01g00143 Brassica carinata HOM05D005404 ORTHO05D006623 9.3e-30 133.7 116 68.1
A08p24810 Brassica napus HOM05D003390 ORTHO05D004189 9.3e-30 133.7 116 68.1
C05p28570 Brassica napus HOM05D005404 ORTHO05D006623 1.2e-29 133.3 116 67.2
BcaB03g13855 Brassica carinata HOM05D005404 ORTHO05D006623 1.6e-29 132.9 116 67.2
BolC5t31581H Brassica oleracea HOM05D005404 ORTHO05D006623 1.6e-29 132.9 117 66.7
Os05g0547850 Oryza sativa ssp. japonica HOM05D005404 ORTHO05D006623 1.6e-29 132.9 114 66.7
FvH4_3g06230 Fragaria vesca HOM05D005404 ORTHO05D006623 2.1e-29 132.5 117 79.5
Sp1g25740 Schrenkiella parvula HOM05D005404 ORTHO05D006623 2.1e-29 132.5 116 67.2
BcaB03g12183 Brassica carinata HOM05D005404 ORTHO05D006623 2.7e-29 132.1 117 66.7
CAN.G257.34 Capsicum annuum HOM05D005404 ORTHO05D006623 3.5e-29 131.7 114 78.1
BcaC05g26997 Brassica carinata HOM05D005404 ORTHO05D006623 6.0e-29 131.0 116 66.4
Thhalv10009098m.g Eutrema salsugineum HOM05D005404 ORTHO05D006623 6.0e-29 131.0 116 66.4
Nn4g26481 Nelumbo nucifera HOM05D005404 ORTHO05D006623 6.0e-29 131.0 135 60.0
BcaC06g35468 Brassica carinata HOM05D005404 ORTHO05D006623 7.9e-29 130.6 116 65.5
Medtr4g094580 Medicago truncatula HOM05D005404 ORTHO05D006623 1.0e-28 130.2 115 66.1
CARHR029600 Cardamine hirsuta HOM05D005404 ORTHO05D006623 1.3e-28 129.8 116 65.5
Lsat_1_v5_gn_1_91580 Lactuca sativa HOM05D005404 ORTHO05D006623 1.3e-28 129.8 115 73.9
FAN25G0636 Fragaria x ananassa HOM05D005404 ORTHO05D006623 1.8e-28 129.4 117 78.6
FAN25G2540 Fragaria x ananassa HOM05D005404 ORTHO05D006623 1.8e-28 129.4 117 78.6
MSTRG.14760 Avicennia marina HOM05D005404 ORTHO05D006623 2.3e-28 129.0 111 69.4
Hma1.2p1_0015F.1_g010240 Hydrangea macrophylla HOM05D005404 ORTHO05D006623 3.9e-28 128.3 150 56.0
RcHm_v2.0_Chr5g0013081 Rosa chinensis HOM05D005404 ORTHO05D006623 8.7e-28 127.1 117 76.9
ATR0681G149 Amborella trichopoda HOM05D005404 ORTHO05D006623 1.1e-27 126.7 103 68.9
Sabra16G0231900 Salix brachista HOM05D005404 ORTHO05D006623 1.1e-27 126.7 84 82.1
PGSC0003DMG400003081 Solanum tuberosum HOM05D005404 ORTHO05D006623 3.3e-27 125.2 114 77.2
AUR62027578 Chenopodium quinoa HOM05D005404 ORTHO05D006623 5.7e-27 124.4 80 85.0
THA.LOC104814282 Tarenaya hassleriana HOM05D005404 ORTHO05D006623 7.4e-27 124.0 114 74.6
BolC3t19881H Brassica oleracea HOM05D005404 ORTHO05D006623 1.3e-26 123.2 108 66.7
BraA08t34436Z Brassica rapa HOM05D003390 ORTHO05D004189 1.3e-26 123.2 108 66.7
BraA07t28813Z Brassica rapa HOM05D005404 ORTHO05D006623 1.6e-26 122.9 113 63.7
BolC7t42063H Brassica oleracea HOM05D005404 ORTHO05D006623 2.1e-26 122.5 113 62.8
Oeu052389.2 Olea europaea HOM05D005404 ORTHO05D006623 2.1e-26 122.5 143 58.0
AUR62035781 Chenopodium quinoa HOM05D005404 ORTHO05D006623 2.8e-26 122.1 117 75.2
A07p10200 Brassica napus HOM05D005404 ORTHO05D006623 3.7e-26 121.7 108 64.8
AT1G29850 Arabidopsis thaliana HOM05D005404 ORTHO05D006623 6.3e-26 120.9 116 74.1
AUR62023445 Chenopodium quinoa HOM05D005404 ORTHO05D006623 8.2e-26 120.6 85 77.6
Zm00001eb294640 Zea mays HOM05D005404 ORTHO05D006623 1.4e-25 119.8 84 76.2
AL1G43680 Arabidopsis lyrata HOM05D005404 ORTHO05D006623 3.1e-25 118.6 117 65.0
FAN16G2304 Fragaria x ananassa HOM05D005404 ORTHO05D006623 3.1e-25 118.6 117 74.4
Nitab4.5_0008782g0030 Nicotiana tabacum HOM05D005404 ORTHO05D006623 4.1e-25 118.2 114 70.2
AagrBONN_evm.TU.Sc2ySwM_362.2923 Anthoceros agrestis HOM05D005404 ORTHO05D006623 2.0e-24 115.9 80 78.8
Zm00001eb342640 Zea mays HOM05D005404 ORTHO05D006623 5.9e-24 114.4 78 78.2
MD09G1183100 Malus domestica HOM05D005404 ORTHO05D006623 2.9e-23 112.1 80 77.5
Mapoly0080s0013 Marchantia polymorpha HOM05D005404 ORTHO05D006623 1.6e-21 106.3 79 74.7
Pp3c14_19320 Physcomitrium patens HOM05D005404 ORTHO05D006623 3.5e-21 105.1 79 70.9
Peaxi162Scf00121g02445 Petunia axillaris HOM05D005404 ORTHO05D006623 7.9e-21 104.0 114 61.4
SMO358G0232 Selaginella moellendorffii HOM05D005404 ORTHO05D006623 7.9e-21 104.0 79 72.2
Cpa.g.sc17.100 Carica papaya HOM05D005404 ORTHO05D006623 1.3e-20 103.2 64 85.9
arahy.Tifrunner.gnm1.ann1.JSLQ1D Arachis hypogaea HOM05D005404 ORTHO05D006623 3.0e-20 102.1 66 83.3
TAR636G3446 Trochodendron aralioides HOM05D005404 ORTHO05D006623 8.7e-20 100.5 83 69.9
SEGI_04398 Sequoiadendron giganteum HOM05D005404 ORTHO05D006623 5.7e-19 97.8 66 81.8
Os05g0546500 Oryza sativa ssp. japonica HOM05D005404 ORTHO05D006623 7.4e-19 97.4 66 78.8
CBR_g45965 Chara braunii HOM05D005404 ORTHO05D006623 1.6e-18 96.3 83 62.7
Nitab4.5_0003527g0030 Nicotiana tabacum HOM05D005404 ORTHO05D006623 9.0e-17 90.5 60 83.3
Aa31LG6G5780 Aethionema arabicum HOM05D005404 ORTHO05D006623 4.5e-16 88.2 83 63.9
Cre12.g557800 Chlamydomonas reinhardtii HOM05D005404 ORTHO05D006623 9.4e-14 80.5 85 54.1
PRCOL_00005423 Prasinoderma coloniale HOM05D005404 ORTHO05D006623 1.6e-13 79.7 84 51.2
C03p76250 Brassica napus HOM05D005404 ORTHO05D006623 3.6e-13 78.6 59 72.9
HPP92_021557 Vanilla planifolia HOM05D005404 ORTHO05D006623 6.1e-13 77.8 52 78.8
C07p15720 Brassica napus HOM05D005404 ORTHO05D006623 1.8e-12 76.3 73 63.0
ClCG01G024320 Citrullus lanatus HOM05D005404 ORTHO05D006623 5.1e-12 74.7 66 63.6
Nitab4.5_0010964g0060 Nicotiana tabacum HOM05D000728 ORTHO05D001474 6.7e-12 74.3 69 63.8
CSS0048314 Camellia sinensis var. sinensis HOM05D005404 ORTHO05D006623 2.0e-11 72.8 73 61.6
Hund21505 Selenicereus undatus HOM05D005404 ORTHO05D006623 9.1e-09 63.9 111 40.5
Nn4g23354 Nelumbo nucifera HOM05D005404 ORTHO05D006623 3.2e-06 55.5 40 72.5


User provided reference genes

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