Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046515.2 Olea europaea HOM05D004629 ORTHO05D006604 1.8e-287 991.9 502 100.0
Oeu038860.1 Olea europaea HOM05D004629 ORTHO05D006604 1.4e-258 896.0 635 76.4
SGA_v2.0_scaffold1G00754 Striga asiatica HOM05D004629 ORTHO05D006604 9.4e-252 873.2 635 74.0
CiPaw.13G171100 Carya illinoinensis HOM05D004629 ORTHO05D006604 2.7e-251 871.7 634 73.2
SalBow2G2882 Salvia bowleyana HOM05D004629 ORTHO05D006604 3.6e-251 871.3 635 74.0
Dinv36331 Davidia involucrata HOM05D004629 ORTHO05D006604 6.1e-251 870.5 634 73.5
MSTRG.18392 Avicennia marina HOM05D004629 ORTHO05D006604 1.0e-250 869.8 635 73.7
Actinidia06301 Actinidia chinensis HOM05D004629 ORTHO05D006604 3.9e-250 867.8 634 74.0
Cfa009633 Carpinus fangiana HOM05D004629 ORTHO05D006604 1.5e-249 865.9 634 73.8
Ciclev10014585m.g Citrus clementina HOM05D004629 ORTHO05D006604 4.4e-249 864.4 634 72.7
QL01p010068 Quercus lobata HOM05D004629 ORTHO05D006604 4.4e-249 864.4 633 73.3
MBI13_g20490_MAGBIO Magnolia biondii HOM05D004629 ORTHO05D006604 7.4e-249 863.6 634 73.0
MD11G1015100 Malus domestica HOM05D004629 ORTHO05D006604 7.4e-249 863.6 634 73.3
Rhsim01G0186400 Rhododendron simsii HOM05D004629 ORTHO05D006604 7.4e-249 863.6 634 73.0
Prupe.6G013000 Prunus persica HOM05D004629 ORTHO05D006604 9.7e-249 863.2 633 73.1
Thecc.10G155600 Theobroma cacao HOM05D004629 ORTHO05D006604 1.7e-248 862.4 634 73.0
MD03G1012400 Malus domestica HOM05D004629 ORTHO05D006604 3.7e-248 861.3 634 73.2
Potri.003G215100 Populus trichocarpa HOM05D004629 ORTHO05D006604 4.8e-248 860.9 634 72.7
VMungo0720G3137 Vigna mungo HOM05D004629 ORTHO05D006604 4.8e-248 860.9 634 72.7
Cc01_g02770 Coffea canephora HOM05D004629 ORTHO05D006604 8.2e-248 860.1 635 72.1
Glyma.20G243700 Glycine max HOM05D004629 ORTHO05D006604 1.4e-247 859.4 634 72.7
CANSAT11G0664 Cannabis sativa HOM05D004629 ORTHO05D006604 3.1e-247 858.2 634 72.4
Duzib128G1447 Durio zibethinus HOM05D004629 ORTHO05D006604 5.3e-247 857.4 634 72.2
Lj5g0025778 Lotus japonicus HOM05D004629 ORTHO05D006604 7.0e-247 857.1 634 72.4
Manes.03G089535 Manihot esculenta HOM05D004629 ORTHO05D006604 7.0e-247 857.1 634 72.4
CsaV3_1G042270 Cucumis sativus L. HOM05D004629 ORTHO05D006604 9.1e-247 856.7 634 72.6
Potri.001G010800 Populus trichocarpa HOM05D004629 ORTHO05D006604 1.2e-246 856.3 634 72.2
arahy.Tifrunner.gnm1.ann1.MLY2RP Arachis hypogaea HOM05D004629 ORTHO05D006604 2.0e-246 855.5 634 72.7
Haze_23000 Corylus avellana HOM05D004629 ORTHO05D006604 7.7e-246 853.6 630 73.2
Migut.N02273 Erythranthe guttata HOM05D004629 ORTHO05D006604 7.7e-246 853.6 635 72.4
Nitab4.5_0005132g0060 Nicotiana tabacum HOM05D004629 ORTHO05D006604 7.7e-246 853.6 635 71.7
RcHm_v2.0_Chr5g0081161 Rosa chinensis HOM05D004629 ORTHO05D006604 1.3e-245 852.8 634 72.2
arahy.Tifrunner.gnm1.ann1.XFL7KU Arachis hypogaea HOM05D004629 ORTHO05D006604 2.2e-245 852.0 634 72.4
PGR119G2006 Punica granatum HOM05D004629 ORTHO05D006604 2.2e-245 852.0 635 72.1
Lalb_Chr06g0164051 Lupinus albus HOM05D004629 ORTHO05D006604 2.9e-245 851.7 634 71.8
Sabra03G0160400 Salix brachista HOM05D004629 ORTHO05D006604 2.9e-245 851.7 644 71.6
MELO3C015653.2 Cucumis melo HOM05D004629 ORTHO05D006604 5.0e-245 850.9 630 72.4
Eucgr.B02610 Eucalyptus grandis HOM05D004629 ORTHO05D006604 5.0e-245 850.9 634 71.9
Atru.chr3.2163_Atru.chr3.2169 Acer truncatum HOM05D004629 ORTHO05D006604 8.5e-245 850.1 628 72.1
Phvul.007G006400 Phaseolus vulgaris HOM05D004629 ORTHO05D006604 8.5e-245 850.1 632 71.5
FAN11G0302 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.1e-244 849.7 634 71.9
EL10Ac4g10337 Beta vulgaris HOM05D004629 ORTHO05D006604 1.9e-244 849.0 634 71.6
Glyma.10G293800 Glycine max HOM05D004629 ORTHO05D006604 1.9e-244 849.0 631 72.1
Sed0008832 Sechium edule HOM05D004629 ORTHO05D006604 2.5e-244 848.6 634 71.6
TWI60G1346 Tripterygium wilfordii HOM05D004629 ORTHO05D006604 4.2e-244 847.8 634 71.1
Sc09g0000300 Simmondsia chinensis HOM05D004629 ORTHO05D006604 9.4e-244 846.7 634 71.5
Sopen01g002270 Solanum pennellii HOM05D004629 ORTHO05D006604 1.2e-243 846.3 635 71.2
Solyc01g006280.3 Solanum lycopersicum HOM05D004629 ORTHO05D006604 1.6e-243 845.9 635 71.2
FAN25G1401 Fragaria x ananassa HOM05D004629 ORTHO05D006604 2.1e-243 845.5 634 71.6
Ah.04g161630 Amaranthus hybridus HOM05D004629 ORTHO05D006604 3.6e-243 844.7 633 71.2
PGSC0003DMG400032146 Solanum tuberosum HOM05D004629 ORTHO05D006604 3.6e-243 844.7 635 71.0
Ca_11347_v3 Cicer arietinum L. HOM05D004629 ORTHO05D006604 8.0e-243 843.6 634 71.0
Gorai.012G017900 Gossypium raimondii HOM05D004629 ORTHO05D006604 8.0e-243 843.6 634 71.3
PSO339G6259 Papaver somniferum HOM05D004629 ORTHO05D006604 1.0e-242 843.2 634 71.6
AL1G58130 Arabidopsis lyrata HOM05D004629 ORTHO05D006604 2.3e-242 842.0 635 70.4
Gohir.A05G400500 Gossypium hirsutum HOM05D004629 ORTHO05D006604 2.3e-242 842.0 634 71.1
PSO384G3664 Papaver somniferum HOM05D004629 ORTHO05D006604 2.3e-242 842.0 634 71.6
Peaxi162Scf00192g00022 Petunia axillaris HOM05D004629 ORTHO05D006604 2.3e-242 842.0 630 72.1
Gohir.D04G015400 Gossypium hirsutum HOM05D004629 ORTHO05D006604 3.0e-242 841.6 634 71.1
CAN.G140.2 Capsicum annuum HOM05D004629 ORTHO05D006604 4.0e-242 841.3 624 72.0
Thhalv10011315m.g Eutrema salsugineum HOM05D004629 ORTHO05D006604 5.2e-242 840.9 630 70.8
ClCG03G013940 Citrullus lanatus HOM05D004629 ORTHO05D006604 6.7e-242 840.5 634 71.9
Medtr1g116140 Medicago truncatula HOM05D004629 ORTHO05D006604 6.7e-242 840.5 634 71.0
DCAR_024372 Daucus carota HOM05D004629 ORTHO05D006604 8.8e-242 840.1 631 71.3
Hund21652 Selenicereus undatus HOM05D004629 ORTHO05D006604 1.2e-241 839.7 634 71.0
AT1G50480 Arabidopsis thaliana HOM05D004629 ORTHO05D006604 1.5e-241 839.3 635 70.1
Aa31LG10G3810 Aethionema arabicum HOM05D004629 ORTHO05D006604 2.0e-241 839.0 630 70.8
Carub.0001s3955 Capsella rubella HOM05D004629 ORTHO05D006604 2.0e-241 839.0 634 70.2
AUR62000039 Chenopodium quinoa HOM05D004629 ORTHO05D006604 2.0e-241 839.0 661 69.3
TPR.G10403 Trifolium pratense HOM05D004629 ORTHO05D006604 2.0e-241 839.0 634 71.1
CSS0018441 Camellia sinensis var. sinensis HOM05D004629 ORTHO05D006604 3.3e-241 838.2 620 72.9
FAN16G0373 Fragaria x ananassa HOM05D004629 ORTHO05D006604 9.7e-241 836.6 628 71.5
Lalb_Chr02g0143781 Lupinus albus HOM05D004629 ORTHO05D006604 2.2e-240 835.5 634 70.3
Sp1g37320 Schrenkiella parvula HOM05D004629 ORTHO05D006604 2.8e-240 835.1 630 70.5
CARHR040480 Cardamine hirsuta HOM05D004629 ORTHO05D006604 4.8e-240 834.3 630 70.5
HanXRQChr07g0196791 Helianthus annuus HOM05D004629 ORTHO05D006604 4.8e-240 834.3 632 71.5
THA.LOC104806618 Tarenaya hassleriana HOM05D004629 ORTHO05D006604 6.3e-240 833.9 630 70.2
ECA238G3810 Erigeron canadensis HOM05D004629 ORTHO05D006604 1.1e-239 833.2 630 71.4
Aqoxy2G00099 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 1.8e-239 832.4 633 70.8
BcaB07g33484 Brassica carinata HOM05D004629 ORTHO05D006604 1.8e-239 832.4 630 70.3
C05p33610 Brassica napus HOM05D004629 ORTHO05D006604 1.8e-239 832.4 622 70.4
A06p03100 Brassica napus HOM05D004629 ORTHO05D006604 3.1e-239 831.6 630 70.2
BcaC08g43218 Brassica carinata HOM05D004629 ORTHO05D006604 4.1e-239 831.2 630 70.2
C06p05660 Brassica napus HOM05D004629 ORTHO05D006604 4.1e-239 831.2 630 70.2
BolC6t35677H Brassica oleracea HOM05D004629 ORTHO05D006604 4.1e-239 831.2 630 70.2
BcaB02g11151 Brassica carinata HOM05D004629 ORTHO05D006604 1.2e-238 829.7 635 69.0
BraA06t23523Z Brassica rapa HOM05D004629 ORTHO05D006604 1.2e-238 829.7 630 70.2
BolC5t32091H Brassica oleracea HOM05D004629 ORTHO05D006604 5.9e-238 827.4 635 69.0
Medtr5g059390 Medicago truncatula HOM05D004629 ORTHO05D006604 7.7e-238 827.0 621 71.5
ATR0598G234 Amborella trichopoda HOM05D004629 ORTHO05D006604 2.2e-237 825.5 634 70.0
BraA05t20921Z Brassica rapa HOM05D004629 ORTHO05D006604 2.9e-237 825.1 632 69.3
Lsat_1_v5_gn_2_101421 Lactuca sativa HOM05D004629 ORTHO05D006604 3.8e-237 824.7 630 70.5
Os09g0446800 Oryza sativa ssp. japonica HOM05D004629 ORTHO05D006604 5.0e-237 824.3 634 69.2
BcaC05g27413 Brassica carinata HOM05D004629 ORTHO05D006604 6.5e-237 823.9 635 69.0
A05p20130 Brassica napus HOM05D004629 ORTHO05D006604 8.5e-237 823.5 632 69.1
Zm00001eb314490 Zea mays HOM05D004629 ORTHO05D006604 3.2e-236 821.6 634 69.1
TAR369G0186 Trochodendron aralioides HOM05D004629 ORTHO05D006604 1.2e-235 819.7 629 70.9
HPP92_005763 Vanilla planifolia HOM05D004629 ORTHO05D006604 1.2e-235 819.7 634 69.2
GSVIVG01025376001 Vitis vinifera HOM05D004629 ORTHO05D006604 2.3e-234 815.5 527 81.2
Ciclev10014598m.g Citrus clementina HOM05D004629 ORTHO05D006604 1.4e-231 806.2 632 69.8
ECA248G3511 Erigeron canadensis HOM05D004629 ORTHO05D006604 6.1e-227 790.8 628 67.5
HanXRQChr11g0344961 Helianthus annuus HOM05D004629 ORTHO05D006604 1.5e-225 786.2 628 67.2
Lsat_1_v5_gn_1_68420 Lactuca sativa HOM05D004629 ORTHO05D006604 3.4e-225 785.0 628 66.6
Nitab4.5_0008074g0010 Nicotiana tabacum HOM05D004629 ORTHO05D006604 5.6e-220 767.7 582 70.8
Pp3c15_21130 Physcomitrium patens HOM05D004629 ORTHO05D006604 1.7e-213 746.1 631 63.4
Psat6g238880 Pisum sativum HOM05D004629 ORTHO05D006604 2.5e-212 742.3 565 70.1
Mapoly0009s0223 Marchantia polymorpha HOM05D004629 ORTHO05D006604 9.5e-204 713.8 635 61.6
Nn7g35984 Nelumbo nucifera HOM05D004629 ORTHO05D006604 6.8e-194 681.0 538 69.5
CBR_g29353 Chara braunii HOM05D004629 ORTHO05D006604 5.8e-193 677.9 648 58.5
AUR62019209 Chenopodium quinoa HOM05D004629 ORTHO05D006604 7.6e-193 677.6 534 69.1
Lj2A677T24 Lonicera japonica HOM05D004629 ORTHO05D006604 9.9e-193 677.2 534 69.3
Cre13.g566000 Chlamydomonas reinhardtii HOM05D004629 ORTHO05D006604 1.9e-188 662.9 629 58.0
SMO364G0493 Selaginella moellendorffii HOM05D004629 ORTHO05D006604 4.5e-177 625.2 648 55.2
Cfa009637 Carpinus fangiana HOM05D004629 ORTHO05D006604 2.5e-172 609.4 462 71.4
vmacro16237 Vaccinium macrocarpon HOM05D004629 ORTHO05D006604 7.4e-172 607.8 461 71.8
FvH4_3g44470 Fragaria vesca HOM05D004629 ORTHO05D006604 2.9e-168 595.9 496 66.3
MCO09G252 Micromonas commoda HOM05D004629 ORTHO05D006604 9.6e-164 580.9 638 52.4
unitig_22.g5473 Utricularia gibba HOM05D004629 ORTHO05D006604 1.8e-157 560.1 404 73.8
Cfa022255 Carpinus fangiana HOM05D004629 ORTHO05D006604 6.3e-155 551.6 637 49.3
AagrBONN_evm.TU.Sc2ySwM_117.3293 Anthoceros agrestis HOM05D004629 ORTHO05D006604 1.3e-147 527.3 499 59.5
CDE05G0953 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 1.0e-125 454.5 377 66.8
Cpa.g.sc119.97 Carica papaya HOM05D004629 ORTHO05D006604 2.0e-124 450.3 312 76.3
Haze_26090 Corylus avellana HOM05D004629 ORTHO05D006604 2.6e-124 449.9 632 43.0
CDE05G1958 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 3.1e-122 443.0 394 62.9
CDE05G1726 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 1.2e-121 441.0 354 67.8
Glyma.10G112700 Glycine max HOM05D004629 ORTHO05D006604 6.6e-112 408.7 293 74.4
CDE05G3086 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 3.6e-110 402.9 486 53.3
BcaB02g11149 Brassica carinata HOM05D004629 ORTHO05D006604 1.8e-101 374.0 271 73.8
Nn2g15715 Nelumbo nucifera HOM05D004629 ORTHO05D019743 4.4e-92 342.8 501 43.7
Actinidia39366 Actinidia chinensis HOM05D004629 ORTHO05D006604 6.0e-73 279.3 182 79.1
CDE05G1698 Ceratophyllum demersum HOM05D004635 ORTHO05D005899 6.0e-73 279.3 212 69.8
PRCOL_00001239 Prasinoderma coloniale HOM05D004629 ORTHO05D006604 6.9e-69 265.8 478 34.5
Aqoxy5G02405 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 9.3e-66 255.4 182 74.2
CDE05G0143 Ceratophyllum demersum HOM05D004629 ORTHO05D019743 2.2e-59 234.2 231 57.1
Psat2g086520 Pisum sativum HOM05D004629 ORTHO05D006604 1.6e-57 228.0 163 71.8
DCAR_017261 Daucus carota HOM05D004629 ORTHO05D006604 2.3e-56 224.2 163 72.4
Lj2A677G23 Lonicera japonica HOM05D004629 ORTHO05D006604 3.7e-46 190.3 102 92.2
Psat2g086560 Pisum sativum HOM05D004629 ORTHO05D002382 6.5e-43 179.5 177 57.1
Aqoxy3G01857 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 1.6e-41 174.9 102 83.3
Nn7g35985 Nelumbo nucifera HOM05D004629 ORTHO05D019743 4.1e-37 160.2 86 84.9
unitig_22.g5472 Utricularia gibba HOM05D004629 ORTHO05D006604 2.9e-35 154.1 127 64.6
Psat4g081680 Pisum sativum HOM05D004629 ORTHO05D019743 6.1e-33 146.4 91 79.1
AT2G12280 Arabidopsis thaliana HOM05D004629 ORTHO05D019743 7.9e-33 146.0 74 87.8
Psat4g081640 Pisum sativum HOM05D004629 ORTHO05D019743 1.0e-32 145.6 91 78.0
Psat3g007720 Pisum sativum HOM05D004629 ORTHO05D006604 2.8e-30 137.5 79 86.1
Sabra01G0008400 Salix brachista HOM05D004629 ORTHO05D023587 3.1e-29 134.0 219 43.4
Haze_27099 Corylus avellana HOM05D004629 ORTHO05D006604 3.3e-23 114.0 456 24.6
Thecc.10G098800 Theobroma cacao HOM05D004629 ORTHO05D006604 8.2e-22 109.4 147 46.9
BcaB02g11150 Brassica carinata HOM05D004629 ORTHO05D092705 2.0e-20 104.8 53 94.3
CAN.G8813.1 Capsicum annuum HOM05D004629 ORTHO05D006604 3.2e-18 97.4 61 75.4
AT2G12200 Arabidopsis thaliana HOM05D004629 ORTHO05D019743 4.2e-18 97.1 63 69.8
Psat4g161960 Pisum sativum HOM05D001026 ORTHO05D007776 3.6e-17 94.0 60 75.0
Aqoxy5G02400 Aquilegia oxysepala HOM05D004629 ORTHO05D023587 6.7e-16 89.7 80 62.5
Aqoxy2G02051 Aquilegia oxysepala HOM05D004629 ORTHO05D004559 1.6e-12 78.6 56 66.1
Psat1g079640 Pisum sativum HOM05D004629 ORTHO05D023587 2.0e-12 78.2 127 42.5
ECA248G2032 Erigeron canadensis HOM05D004629 ORTHO05D189049 3.2e-10 70.9 65 55.4
DCAR_026904 Daucus carota HOM05D004629 ORTHO05D023587 4.0e-08 63.9 39 74.4
Nn1g06900 Nelumbo nucifera HOM05D004629 ORTHO05D023587 1.5e-07 62.0 33 87.9


User provided reference genes

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