Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045900.1 Olea europaea HOM05D001999 ORTHO05D001994 2.8e-38 161.4 77 100.0
Oeu043739.1 Olea europaea HOM05D001999 ORTHO05D001994 2.2e-19 98.6 52 88.5
MSTRG.27977 Avicennia marina HOM05D001999 ORTHO05D001994 3.7e-14 81.3 52 75.0
Hund07102 Selenicereus undatus HOM05D001999 ORTHO05D001994 5.3e-13 77.4 54 66.7
Actinidia35557 Actinidia chinensis HOM05D001999 ORTHO05D001994 9.1e-13 76.6 52 75.0
Sopen01g043310 Solanum pennellii HOM05D001999 ORTHO05D001994 9.1e-13 76.6 55 67.3
Oeu043342.1 Olea europaea HOM05D001999 ORTHO05D001994 1.5e-12 75.9 52 69.2
Lsat_1_v5_gn_7_72040 Lactuca sativa HOM05D001999 ORTHO05D001994 2.0e-12 75.5 52 69.2
Dinv40334 Davidia involucrata HOM05D001999 ORTHO05D001994 2.6e-12 75.1 52 73.1
DCAR_003361 Daucus carota HOM05D001999 ORTHO05D001994 3.4e-12 74.7 52 75.0
PGSC0003DMG400024717 Solanum tuberosum HOM05D001999 ORTHO05D001994 5.9e-12 73.9 58 62.1
Solyc01g099790.3 Solanum lycopersicum HOM05D001999 ORTHO05D001994 1.0e-11 73.2 57 63.2
Oeu010920.1 Olea europaea HOM05D001999 ORTHO05D001994 1.3e-11 72.8 55 65.5
SGA_v2.0_scaffold586G53057 Striga asiatica HOM05D001999 ORTHO05D001994 1.3e-11 72.8 53 71.7
AUR62005212 Chenopodium quinoa HOM05D001999 ORTHO05D001994 2.9e-11 71.6 52 63.5
Migut.N02088 Erythranthe guttata HOM05D001999 ORTHO05D001994 3.8e-11 71.2 55 69.1
Actinidia19777 Actinidia chinensis HOM05D001999 ORTHO05D001994 5.0e-11 70.9 52 69.2
Dinv30819 Davidia involucrata HOM05D001999 ORTHO05D001994 5.0e-11 70.9 52 69.2
EL10Ac4g09908 Beta vulgaris HOM05D001999 ORTHO05D001994 6.5e-11 70.5 52 63.5
Lj9C146G5 Lonicera japonica HOM05D001999 ORTHO05D001994 6.5e-11 70.5 52 73.1
Rhsim05G0138600 Rhododendron simsii HOM05D001999 ORTHO05D001994 1.1e-10 69.7 52 69.2
CSS0046081 Camellia sinensis var. sinensis HOM05D001999 ORTHO05D001994 1.9e-10 68.9 52 71.2
AUR62000756 Chenopodium quinoa HOM05D001999 ORTHO05D001994 2.5e-10 68.6 52 61.5
FAN14G1734 Fragaria x ananassa HOM05D001999 ORTHO05D001994 2.5e-10 68.6 77 46.8
GSVIVG01031134001 Vitis vinifera HOM05D001999 ORTHO05D001994 2.5e-10 68.6 52 65.4
unitig_0.g2317 Utricularia gibba HOM05D001999 ORTHO05D001994 3.2e-10 68.2 52 65.4
unitig_52.g17384 Utricularia gibba HOM05D001999 ORTHO05D001994 3.2e-10 68.2 52 63.5
SGA_v2.0_scaffold80G25894 Striga asiatica HOM05D001999 ORTHO05D001994 4.2e-10 67.8 52 65.4
Nitab4.5_0010216g0020 Nicotiana tabacum HOM05D001999 ORTHO05D001994 5.5e-10 67.4 53 64.2
Nn4g25807 Nelumbo nucifera HOM05D001999 ORTHO05D001994 7.2e-10 67.0 52 65.4
Sc06g0004090 Simmondsia chinensis HOM05D001999 ORTHO05D001994 7.2e-10 67.0 52 59.6
Nitab4.5_0003844g0010 Nicotiana tabacum HOM05D001999 ORTHO05D001994 1.6e-09 65.9 53 62.3
MSTRG.16390 Avicennia marina HOM05D001999 ORTHO05D001994 2.1e-09 65.5 53 64.2
CSS0018606 Camellia sinensis var. sinensis HOM05D001999 ORTHO05D001994 2.1e-09 65.5 52 63.5
CSS0039587 Camellia sinensis var. sinensis HOM05D001999 ORTHO05D001994 2.1e-09 65.5 52 63.5
HanXRQChr11g0339901 Helianthus annuus HOM05D001999 ORTHO05D001994 3.6e-09 64.7 54 66.7
Sc16g0008800 Simmondsia chinensis HOM05D001999 ORTHO05D001994 3.6e-09 64.7 56 55.4
Hund21714 Selenicereus undatus HOM05D001999 ORTHO05D001994 4.6e-09 64.3 52 57.7
TWI36G1062 Tripterygium wilfordii HOM05D001999 ORTHO05D001994 4.6e-09 64.3 61 57.4
CiPaw.07G022200 Carya illinoinensis HOM05D001999 ORTHO05D001994 7.9e-09 63.5 55 65.5
ECA236G3557 Erigeron canadensis HOM05D001999 ORTHO05D001994 7.9e-09 63.5 48 66.7
FAN09G2669 Fragaria x ananassa HOM05D001999 ORTHO05D001994 7.9e-09 63.5 62 54.8
Manes.09G170900 Manihot esculenta HOM05D001999 ORTHO05D001994 7.9e-09 63.5 64 56.2
Actinidia21498 Actinidia chinensis HOM05D001999 ORTHO05D001994 1.0e-08 63.2 52 63.5
Glyma.10G151500 Glycine max HOM05D001999 ORTHO05D001994 1.8e-08 62.4 61 55.7
Ciclev10001227m.g Citrus clementina HOM05D001999 ORTHO05D001994 2.3e-08 62.0 61 57.4
PGR083G1363 Punica granatum HOM05D001999 ORTHO05D001994 2.3e-08 62.0 53 66.0
Sabra05G0030100 Salix brachista HOM05D001999 ORTHO05D001994 2.3e-08 62.0 61 55.7
THA.LOC104802795 Tarenaya hassleriana HOM05D001999 ORTHO05D001994 2.3e-08 62.0 52 63.5
Peaxi162Scf00037g01221 Petunia axillaris HOM05D001999 ORTHO05D001994 3.0e-08 61.6 54 59.3
Thecc.05G313600 Theobroma cacao HOM05D001999 ORTHO05D001994 3.0e-08 61.6 56 57.1
Lj5g0002371 Lotus japonicus HOM05D001999 ORTHO05D001994 5.1e-08 60.8 57 59.6
Gohir.A11G268300 Gossypium hirsutum HOM05D001999 ORTHO05D001994 8.8e-08 60.1 57 56.1
Gohir.D11G278200 Gossypium hirsutum HOM05D001999 ORTHO05D001994 8.8e-08 60.1 57 56.1
Prupe.6G320100 Prunus persica HOM05D001999 ORTHO05D001994 8.8e-08 60.1 60 55.0
Cc02_g34200 Coffea canephora HOM05D001999 ORTHO05D001994 1.1e-07 59.7 59 52.5
Eucgr.B01912 Eucalyptus grandis HOM05D001999 ORTHO05D001994 1.1e-07 59.7 49 61.2
Gorai.007G300400 Gossypium raimondii HOM05D001999 ORTHO05D001994 1.1e-07 59.7 57 56.1
Gorai.013G205600 Gossypium raimondii HOM05D001999 ORTHO05D001994 1.1e-07 59.7 48 62.5
FAN02G3011 Fragaria x ananassa HOM05D001999 ORTHO05D001994 2.0e-07 58.9 63 47.6
Glyma.03G235100 Glycine max HOM05D001999 ORTHO05D001994 2.0e-07 58.9 52 61.5
unitig_26.g9483 Utricularia gibba HOM05D001999 ORTHO05D001994 2.0e-07 58.9 71 46.5
Glyma.19G232800 Glycine max HOM05D001999 ORTHO05D001994 2.6e-07 58.5 52 61.5
Sed0027191 Sechium edule HOM05D001999 ORTHO05D001994 2.6e-07 58.5 58 51.7
Aqoxy5G00748 Aquilegia oxysepala HOM05D001999 ORTHO05D001994 3.3e-07 58.2 58 48.3
FvH4_6g06620 Fragaria vesca HOM05D001999 ORTHO05D001994 3.3e-07 58.2 44 65.9
Potri.013G015600 Populus trichocarpa HOM05D001999 ORTHO05D001994 3.3e-07 58.2 61 52.5
QL03p020135 Quercus lobata HOM05D001999 ORTHO05D001994 3.3e-07 58.2 62 53.2
Cpa.g.sc327.4 Carica papaya HOM05D001999 ORTHO05D001994 4.4e-07 57.8 40 67.5
HanXRQChr09g0247921 Helianthus annuus HOM05D001999 ORTHO05D001994 4.4e-07 57.8 52 57.7
Haze_04134 Corylus avellana HOM05D001999 ORTHO05D001994 5.7e-07 57.4 63 55.6
Duzib128G0926 Durio zibethinus HOM05D001999 ORTHO05D001994 5.7e-07 57.4 57 56.1
TAR362G0062 Trochodendron aralioides HOM05D001999 ORTHO05D001994 5.7e-07 57.4 55 56.4
FAN05G1277 Fragaria x ananassa HOM05D001999 ORTHO05D001994 7.4e-07 57.0 37 67.6
Glyma.20G236700 Glycine max HOM05D001999 ORTHO05D001994 7.4e-07 57.0 40 67.5
VMungo0540G0393 Vigna mungo HOM05D001999 ORTHO05D001994 7.4e-07 57.0 52 59.6
MBI19_g13195_MAGBIO Magnolia biondii HOM05D001999 ORTHO05D001994 1.3e-06 56.2 57 57.9
Gohir.A13G109800 Gossypium hirsutum HOM05D001999 ORTHO05D001994 1.7e-06 55.8 58 53.4
Gohir.A13G174400 Gossypium hirsutum HOM05D001999 ORTHO05D001994 1.7e-06 55.8 53 58.5
Gohir.D13G112400 Gossypium hirsutum HOM05D001999 ORTHO05D001994 1.7e-06 55.8 58 53.4
Gohir.D13G180200 Gossypium hirsutum HOM05D001999 ORTHO05D001994 1.7e-06 55.8 53 58.5
Gorai.013G126200 Gossypium raimondii HOM05D001999 ORTHO05D001994 1.7e-06 55.8 58 53.4
MD04G1199600 Malus domestica HOM05D001999 ORTHO05D001994 1.7e-06 55.8 60 53.3
Potri.005G024700 Populus trichocarpa HOM05D001999 ORTHO05D001994 1.7e-06 55.8 60 53.3
Aa31LG5G15830 Aethionema arabicum HOM05D001999 ORTHO05D001994 2.2e-06 55.5 51 56.9
ClCG03G017310 Citrullus lanatus HOM05D001999 ORTHO05D001994 2.2e-06 55.5 60 51.7
MELO3C015298.2 Cucumis melo HOM05D001999 ORTHO05D001994 2.2e-06 55.5 60 51.7
CsaV3_1G038740 Cucumis sativus L. HOM05D001999 ORTHO05D001994 2.2e-06 55.5 60 51.7
Peaxi162Scf00071g00544 Petunia axillaris HOM05D001999 ORTHO05D001994 2.2e-06 55.5 44 63.6
Phvul.007G197300 Phaseolus vulgaris HOM05D001999 ORTHO05D001994 2.2e-06 55.5 41 68.3
Sabra13G0017800 Salix brachista HOM05D001999 ORTHO05D001994 2.2e-06 55.5 59 52.5
Duzib177G1061 Durio zibethinus HOM05D001999 ORTHO05D001994 2.8e-06 55.1 43 62.8
HanXRQChr05g0136211 Helianthus annuus HOM05D001999 ORTHO05D001994 2.8e-06 55.1 57 57.9
Lalb_Chr06g0167721 Lupinus albus HOM05D001999 ORTHO05D001994 2.8e-06 55.1 57 57.9
TWI56G0125 Tripterygium wilfordii HOM05D001999 ORTHO05D001994 2.8e-06 55.1 29 79.3
Psat0s1500g0040 Pisum sativum HOM05D001999 ORTHO05D001994 3.7e-06 54.7 45 64.4
THA.LOC104821725 Tarenaya hassleriana HOM05D001999 ORTHO05D001994 3.7e-06 54.7 56 53.6
Sabra13G0013700 Salix brachista HOM05D001999 ORTHO05D001994 4.8e-06 54.3 59 52.5
Sabra13G0013900 Salix brachista HOM05D000092 ORTHO05D000042 4.8e-06 54.3 59 52.5
Sabra13G0015200 Salix brachista HOM05D000070 ORTHO05D001994 4.8e-06 54.3 59 52.5
Sabra13G0019100 Salix brachista HOM05D001999 ORTHO05D001994 4.8e-06 54.3 59 52.5
TAR633G2461 Trochodendron aralioides HOM05D001999 ORTHO05D001994 4.8e-06 54.3 52 55.8
Atru.chr2.75 Acer truncatum HOM05D001999 ORTHO05D001994 8.2e-06 53.5 41 61.0
C05p19250 Brassica napus HOM05D001999 ORTHO05D001994 8.2e-06 53.5 46 60.9
BolC5t30625H Brassica oleracea HOM05D001999 ORTHO05D001994 8.2e-06 53.5 46 60.9
Lj5A391T59 Lonicera japonica HOM05D001999 ORTHO05D001994 8.2e-06 53.5 40 65.0
Lj5A396T57 Lonicera japonica HOM05D001999 ORTHO05D001994 8.2e-06 53.5 40 65.0
Lalb_Chr15g0077401 Lupinus albus HOM05D001999 ORTHO05D001994 8.2e-06 53.5 44 59.1
RcHm_v2.0_Chr3g0455821 Rosa chinensis HOM05D001999 ORTHO05D001994 8.2e-06 53.5 62 48.4


User provided reference genes

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