Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045612.1 Olea europaea HOM05D001415 ORTHO05D001075 1.3e-49 199.5 111 100.0
Oeu053887.1 Olea europaea HOM05D001415 ORTHO05D001075 1.1e-38 163.3 111 85.6
MSTRG.21203 Avicennia marina HOM05D001415 ORTHO05D001075 7.6e-21 104.0 119 58.8
HanXRQChr01g0010481 Helianthus annuus HOM05D001415 ORTHO05D001075 4.9e-20 101.3 113 57.5
TWI79G1693 Tripterygium wilfordii HOM05D001415 ORTHO05D001075 1.5e-16 89.7 110 52.7
unitig_746.g26724 Utricularia gibba HOM05D001415 ORTHO05D001075 5.7e-16 87.8 117 52.1
Lsat_1_v5_gn_5_169241 Lactuca sativa HOM05D001415 ORTHO05D001075 2.2e-15 85.9 119 48.7
CAN.G394.70 Capsicum annuum HOM05D018369 ORTHO05D001075 1.4e-14 83.2 123 53.7
TWI31G0218 Tripterygium wilfordii HOM05D001415 ORTHO05D001075 1.4e-14 83.2 110 50.9
Migut.B01170 Erythranthe guttata HOM05D001415 ORTHO05D001075 2.6e-13 79.0 119 51.3
Duzib168G2106 Durio zibethinus HOM05D001415 ORTHO05D001075 7.6e-13 77.4 117 50.4
Cc01_g13180 Coffea canephora HOM05D001415 ORTHO05D001075 6.5e-12 74.3 111 49.5
Solyc06g076320.1 Solanum lycopersicum HOM05D001415 ORTHO05D001075 6.5e-12 74.3 122 46.7
Ah.15g098480 Amaranthus hybridus HOM05D001415 ORTHO05D001075 2.5e-11 72.4 125 47.2
SalBow3G1548 Salvia bowleyana HOM05D001415 ORTHO05D001075 4.2e-11 71.6 107 46.7
HanXRQChr11g0327601 Helianthus annuus HOM05D001415 ORTHO05D001075 9.4e-11 70.5 108 49.1
Ah.08g219870 Amaranthus hybridus HOM05D001415 ORTHO05D001075 2.1e-10 69.3 120 46.7
Gohir.A05G093900 Gossypium hirsutum HOM05D001415 ORTHO05D001075 3.6e-10 68.6 117 47.0
Gohir.D05G094400 Gossypium hirsutum HOM05D001415 ORTHO05D001075 3.6e-10 68.6 117 47.0
Gorai.009G097500 Gossypium raimondii HOM05D001415 ORTHO05D001075 3.6e-10 68.6 117 47.0
unitig_899.g15255 Utricularia gibba HOM05D001415 ORTHO05D001075 4.6e-10 68.2 117 45.3
Cpa.g.sc81.113 Carica papaya HOM05D001415 ORTHO05D001075 6.1e-10 67.8 125 40.8
Gohir.A13G227216 Gossypium hirsutum HOM05D001415 ORTHO05D001075 6.1e-10 67.8 47 63.8
Gohir.D13G232500 Gossypium hirsutum HOM05D001415 ORTHO05D001075 6.1e-10 67.8 47 63.8
Gorai.013G263300 Gossypium raimondii HOM05D001415 ORTHO05D001075 6.1e-10 67.8 47 63.8
Lalb_Chr19g0137921 Lupinus albus HOM05D001415 ORTHO05D001075 1.0e-09 67.0 109 44.0
Duzib150G0909 Durio zibethinus HOM05D001415 ORTHO05D001075 1.4e-09 66.6 117 46.2
Sed0008013 Sechium edule HOM05D001415 ORTHO05D001075 1.4e-09 66.6 111 46.8
Ciclev10030229m.g Citrus clementina HOM05D001415 ORTHO05D001075 1.8e-09 66.2 107 47.7
Thecc.09G317800 Theobroma cacao HOM05D001415 ORTHO05D001075 1.8e-09 66.2 121 43.8
TPR.G23565 Trifolium pratense HOM05D001415 ORTHO05D001075 1.8e-09 66.2 111 44.1
CAN.G141.1 Capsicum annuum HOM05D018369 ORTHO05D001075 2.3e-09 65.9 115 48.7
COL.COLO4_18559 Corchorus olitorius HOM05D001415 ORTHO05D001075 2.3e-09 65.9 110 47.3
Lj3g0014912 Lotus japonicus HOM05D001415 ORTHO05D001075 6.7e-09 64.3 123 39.8
Sc12g0001300 Simmondsia chinensis HOM05D001415 ORTHO05D001075 6.7e-09 64.3 36 75.0
Solyc06g005610.1 Solanum lycopersicum HOM05D018369 ORTHO05D001075 6.7e-09 64.3 115 47.8
PGSC0003DMG400002141 Solanum tuberosum HOM05D018369 ORTHO05D001075 6.7e-09 64.3 115 47.8
CSS0027316 Camellia sinensis var. sinensis HOM05D001415 ORTHO05D001075 1.5e-08 63.2 125 44.0
Glyma.12G061000 Glycine max HOM05D008503 ORTHO05D001075 1.5e-08 63.2 115 41.7
DCAR_005958 Daucus carota HOM05D001415 ORTHO05D001075 1.9e-08 62.8 122 49.2
Hma1.2p1_0757F.1_g213305 Hydrangea macrophylla HOM05D001415 ORTHO05D001075 1.9e-08 62.8 108 48.1
Hma1.2p1_0757F.1_g213310 Hydrangea macrophylla HOM05D001415 ORTHO05D001075 1.9e-08 62.8 108 48.1
Lj3g0013501 Lotus japonicus HOM05D008503 ORTHO05D001075 1.9e-08 62.8 112 46.4
Aqoxy2G02269 Aquilegia oxysepala HOM05D001415 ORTHO05D001075 4.3e-08 61.6 110 33.6
A04p22250 Brassica napus HOM05D008503 ORTHO05D001075 4.3e-08 61.6 115 46.1
BraA04t17777Z Brassica rapa HOM05D008503 ORTHO05D001075 4.3e-08 61.6 115 46.1
Potri.001G242800 Populus trichocarpa HOM05D001415 ORTHO05D001075 4.3e-08 61.6 108 41.7
Rhsim01G0230800 Rhododendron simsii HOM05D001415 ORTHO05D001075 5.7e-08 61.2 105 45.7
Duzib170G0931 Durio zibethinus HOM05D001415 ORTHO05D001075 7.4e-08 60.8 117 41.0
Nn2g11165 Nelumbo nucifera HOM05D001415 ORTHO05D001075 7.4e-08 60.8 110 36.4
Potri.009G034300 Populus trichocarpa HOM05D001415 ORTHO05D001075 7.4e-08 60.8 108 41.7
Atru.chr3.3969 Acer truncatum HOM05D001415 ORTHO05D001075 9.7e-08 60.5 112 45.5
MELO3C020615.2 Cucumis melo HOM05D001415 ORTHO05D001075 1.7e-07 59.7 109 43.1
arahy.Tifrunner.gnm1.ann1.Z87QWF Arachis hypogaea HOM05D008503 ORTHO05D001075 2.2e-07 59.3 120 40.8
Carub.0008s2019 Capsella rubella HOM05D008503 ORTHO05D001075 2.8e-07 58.9 67 50.7
MELO3C025900.2 Cucumis melo HOM05D001415 ORTHO05D001075 2.8e-07 58.9 117 41.0
Nn2g13402 Nelumbo nucifera HOM05D001415 ORTHO05D001075 2.8e-07 58.9 110 35.5
CANSAT56G0089 Cannabis sativa HOM05D001415 ORTHO05D001075 3.7e-07 58.5 109 38.5
CiPaw.13G091000 Carya illinoinensis HOM05D001415 ORTHO05D001075 3.7e-07 58.5 35 68.6
MD03G1087500 Malus domestica HOM05D001415 ORTHO05D001075 3.7e-07 58.5 105 41.9
Medtr4g064520 Medicago truncatula HOM05D001415 ORTHO05D001075 3.7e-07 58.5 105 44.8
FvH4_3g04210 Fragaria vesca HOM05D008503 ORTHO05D001075 4.8e-07 58.2 104 39.4
HanXRQChr09g0250171 Helianthus annuus HOM05D001415 ORTHO05D001075 4.8e-07 58.2 76 44.7
Medtr2g097570 Medicago truncatula HOM05D001415 ORTHO05D001075 6.3e-07 57.8 48 58.3
Sp6g21220 Schrenkiella parvula HOM05D008503 ORTHO05D001075 6.3e-07 57.8 62 48.4
Potri.010G201700 Populus trichocarpa HOM05D001415 ORTHO05D001075 8.2e-07 57.4 110 33.6
Sed0003934 Sechium edule HOM05D001415 ORTHO05D001075 1.1e-06 57.0 59 47.5
Sopen06g001570 Solanum pennellii HOM05D018369 ORTHO05D001075 1.1e-06 57.0 111 46.8
Haze_17089 Corylus avellana HOM05D001415 ORTHO05D001075 1.4e-06 56.6 62 45.2
Lsat_1_v5_gn_2_118460 Lactuca sativa HOM05D001415 ORTHO05D001075 1.4e-06 56.6 108 38.0
Manes.10G028700 Manihot esculenta HOM05D001415 ORTHO05D001075 1.4e-06 56.6 110 33.6
Sed0019804 Sechium edule HOM05D001415 ORTHO05D001075 1.4e-06 56.6 45 53.3
Potri.008G057800 Populus trichocarpa HOM05D001415 ORTHO05D001075 1.8e-06 56.2 74 45.9
AT5G59510 Arabidopsis thaliana HOM05D008503 ORTHO05D001075 2.4e-06 55.8 63 52.4
arahy.Tifrunner.gnm1.ann1.K7ANH9 Arachis hypogaea HOM05D001415 ORTHO05D001075 2.4e-06 55.8 34 67.6
CARHR285880 Cardamine hirsuta HOM05D008503 ORTHO05D001075 2.4e-06 55.8 58 51.7
Manes.07G117800 Manihot esculenta HOM05D001415 ORTHO05D001075 2.4e-06 55.8 110 33.6
RcHm_v2.0_Chr5g0065921 Rosa chinensis HOM05D001415 ORTHO05D001075 2.4e-06 55.8 106 42.5
ClCG07G003480 Citrullus lanatus HOM05D001415 ORTHO05D001075 3.1e-06 55.5 109 34.9
MELO3C023874.2 Cucumis melo HOM05D001415 ORTHO05D001075 3.1e-06 55.5 58 44.8
ECA238G4842 Erigeron canadensis HOM05D001415 ORTHO05D001075 3.1e-06 55.5 108 34.3
Hma1.2p1_0998F.1_g246100 Hydrangea macrophylla HOM05D001415 ORTHO05D001075 3.1e-06 55.5 61 44.3
SalBow6G6345 Salvia bowleyana HOM05D001415 ORTHO05D001075 3.1e-06 55.5 47 51.1
Actinidia02936 Actinidia chinensis HOM05D001415 ORTHO05D001075 4.1e-06 55.1 109 33.9
BcaB05g22516 Brassica carinata HOM05D008503 ORTHO05D001075 4.1e-06 55.1 51 56.9
HanXRQChr07g0201511 Helianthus annuus HOM05D001415 ORTHO05D001075 4.1e-06 55.1 108 38.0
BcaC02g08109 Brassica carinata HOM05D001415 ORTHO05D001075 5.3e-06 54.7 115 43.5
CSS0013409 Camellia sinensis var. sinensis HOM05D001415 ORTHO05D001075 5.3e-06 54.7 74 41.9
Lsat_1_v5_gn_9_64901 Lactuca sativa HOM05D001415 ORTHO05D001075 5.3e-06 54.7 76 43.4
CiPaw.01G289500 Carya illinoinensis HOM05D001415 ORTHO05D001075 6.9e-06 54.3 109 33.0
Sc21g0005940 Simmondsia chinensis HOM05D001415 ORTHO05D001075 6.9e-06 54.3 116 37.1
A10p16720 Brassica napus HOM05D008503 ORTHO05D001075 9.1e-06 53.9 62 45.2
BraA10t43753Z Brassica rapa HOM05D008503 ORTHO05D001075 9.1e-06 53.9 62 45.2
CARHR122420 Cardamine hirsuta HOM05D008503 ORTHO05D001075 9.1e-06 53.9 35 65.7
PSO274G0001 Papaver somniferum HOM05D001415 ORTHO05D001075 9.1e-06 53.9 59 47.5
PSO513G0025 Papaver somniferum HOM05D001415 ORTHO05D001075 9.1e-06 53.9 59 47.5
Sed0002507 Sechium edule HOM05D001415 ORTHO05D001075 9.1e-06 53.9 31 67.7


User provided reference genes

Program Settings