Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045306.1 Olea europaea HOM05D001237 ORTHO05D024381 3.8e-28 127.5 66 100.0
Cpa.g.sc8.153 Carica papaya HOM05D001237 ORTHO05D001827 2.3e-09 65.1 129 36.4
Cpa.g.sc60.98 Carica papaya HOM05D001237 ORTHO05D001827 2.0e-08 62.0 142 34.5
Oeu006729.1 Olea europaea HOM05D001237 ORTHO05D001827 1.3e-07 59.3 37 83.8
Oeu006732.1 Olea europaea HOM05D001237 ORTHO05D001827 1.3e-07 59.3 37 83.8
Gohir.A07G156500 Gossypium hirsutum HOM05D001237 ORTHO05D001827 2.2e-07 58.5 58 60.3
COL.COLO4_15931 Corchorus olitorius HOM05D001237 ORTHO05D001827 3.7e-07 57.8 37 78.4
COL.COLO4_22985 Corchorus olitorius HOM05D001237 ORTHO05D001827 3.7e-07 57.8 37 78.4
COL.COLO4_37136 Corchorus olitorius HOM05D001237 ORTHO05D001827 3.7e-07 57.8 37 78.4
Duzib211G0200 Durio zibethinus HOM05D001237 ORTHO05D001827 3.7e-07 57.8 37 83.8
Gohir.D07G162800 Gossypium hirsutum HOM05D001237 ORTHO05D001827 3.7e-07 57.8 37 81.1
Gorai.001G186700 Gossypium raimondii HOM05D001237 ORTHO05D001827 3.7e-07 57.8 37 81.1
Oeu015951.1 Olea europaea HOM05D001237 ORTHO05D001827 3.7e-07 57.8 37 83.8
ClCG06G007730 Citrullus lanatus HOM05D001237 ORTHO05D001827 4.9e-07 57.4 36 83.3
Eucgr.H00799 Eucalyptus grandis HOM05D001237 ORTHO05D001827 4.9e-07 57.4 37 81.1
Gohir.D08G057400 Gossypium hirsutum HOM05D001237 ORTHO05D001827 4.9e-07 57.4 37 81.1
Gorai.004G058600 Gossypium raimondii HOM05D001237 ORTHO05D001827 4.9e-07 57.4 37 81.1
Thecc.01G225300 Theobroma cacao HOM05D001237 ORTHO05D001827 4.9e-07 57.4 37 81.1
BcaC06g30760 Brassica carinata HOM05D001237 ORTHO05D024381 6.4e-07 57.0 41 73.2
Manes.13G046000 Manihot esculenta HOM05D001237 ORTHO05D001827 8.3e-07 56.6 37 78.4
Oeu022368.1 Olea europaea HOM05D001237 ORTHO05D001827 8.3e-07 56.6 36 83.3
COL.COLO4_09877 Corchorus olitorius HOM05D001237 ORTHO05D024381 1.1e-06 56.2 37 75.7
MELO3C015177.2 Cucumis melo HOM05D001237 ORTHO05D001827 1.1e-06 56.2 36 80.6
MELO3C020452.2 Cucumis melo HOM05D001237 ORTHO05D001827 1.1e-06 56.2 36 80.6
MELO3C021339.2 Cucumis melo HOM05D001237 ORTHO05D001827 1.1e-06 56.2 36 80.6
CsaV3_1G042940 Cucumis sativus L. HOM05D001237 ORTHO05D001827 1.1e-06 56.2 36 80.6
CsaV3_2G011490 Cucumis sativus L. HOM05D001237 ORTHO05D001827 1.1e-06 56.2 36 80.6
Gorai.007G154600 Gossypium raimondii HOM05D001237 ORTHO05D001827 1.1e-06 56.2 37 78.4
Oeu018221.1 Olea europaea HOM05D001237 ORTHO05D001827 1.1e-06 56.2 37 78.4
RcHm_v2.0_Chr7g0231251 Rosa chinensis HOM05D001237 ORTHO05D001827 1.1e-06 56.2 36 80.6
SalBow3G2230 Salvia bowleyana HOM05D001237 ORTHO05D001827 1.1e-06 56.2 37 81.1
SalBow8G2085 Salvia bowleyana HOM05D001237 ORTHO05D001827 1.1e-06 56.2 37 78.4
THA.LOC104822501 Tarenaya hassleriana HOM05D001237 ORTHO05D001827 1.1e-06 56.2 37 81.1
MSTRG.4221 Avicennia marina HOM05D001237 ORTHO05D001827 1.4e-06 55.8 37 78.4
CSS0026211 Camellia sinensis var. sinensis HOM05D001237 ORTHO05D001827 1.4e-06 55.8 37 75.7
Cpa.g.sc8.152 Carica papaya HOM05D001237 ORTHO05D001827 1.4e-06 55.8 37 78.4
Dinv19201 Davidia involucrata HOM05D001237 ORTHO05D001827 1.4e-06 55.8 37 78.4
Gohir.A08G047000 Gossypium hirsutum HOM05D001237 ORTHO05D001827 1.4e-06 55.8 37 78.4
Atru.chr4.1712 Acer truncatum HOM05D001237 ORTHO05D001827 1.9e-06 55.5 36 80.6
Atru.chr5.1835 Acer truncatum HOM05D001237 ORTHO05D001827 1.9e-06 55.5 36 80.6
Ciclev10023466m.g Citrus clementina HOM05D001237 ORTHO05D001827 1.9e-06 55.5 37 78.4
Duzib138G1143 Durio zibethinus HOM05D001237 ORTHO05D001827 1.9e-06 55.5 37 81.1
Glyma.16G092800 Glycine max HOM05D001237 ORTHO05D001827 1.9e-06 55.5 37 75.7
PGR083G1154 Punica granatum HOM05D001237 ORTHO05D001827 1.9e-06 55.5 37 78.4
Sed0026920 Sechium edule HOM05D001237 ORTHO05D001827 1.9e-06 55.5 36 80.6
SGA_v2.0_scaffold216G42385 Striga asiatica HOM05D001237 ORTHO05D001827 1.9e-06 55.5 37 78.4
Aa31LG5G17670 Aethionema arabicum HOM05D001237 ORTHO05D001827 2.4e-06 55.1 37 75.7
FvH4_1g23280 Fragaria vesca HOM05D001237 ORTHO05D001827 2.4e-06 55.1 36 77.8
FvH4_1g23310 Fragaria vesca HOM05D001237 ORTHO05D001827 2.4e-06 55.1 36 77.8
FAN07G2097 Fragaria x ananassa HOM05D001237 ORTHO05D001827 2.4e-06 55.1 36 77.8
FAN07G2553 Fragaria x ananassa HOM05D001237 ORTHO05D001827 2.4e-06 55.1 36 77.8
FAN12G1961 Fragaria x ananassa HOM05D001237 ORTHO05D001827 2.4e-06 55.1 36 77.8
FAN17G1105 Fragaria x ananassa HOM05D001237 ORTHO05D001827 2.4e-06 55.1 36 77.8
FAN19G0263 Fragaria x ananassa HOM05D001237 ORTHO05D001827 2.4e-06 55.1 36 77.8
FAN19G2672 Fragaria x ananassa HOM05D001237 ORTHO05D001827 2.4e-06 55.1 36 77.8
FAN22G0999 Fragaria x ananassa HOM05D001237 ORTHO05D001827 2.4e-06 55.1 36 77.8
Oeu016731.1 Olea europaea HOM05D001237 ORTHO05D001827 2.4e-06 55.1 37 75.7
RcHm_v2.0_Chr4g0415441 Rosa chinensis HOM05D001237 ORTHO05D001827 2.4e-06 55.1 36 77.8
THA.LOC104802671 Tarenaya hassleriana HOM05D001237 ORTHO05D001827 2.4e-06 55.1 37 78.4
THA.LOC104808786 Tarenaya hassleriana HOM05D001237 ORTHO05D001827 2.4e-06 55.1 36 80.6
THA.LOC104818959 Tarenaya hassleriana HOM05D001237 ORTHO05D001827 2.4e-06 55.1 37 78.4
VMungo1383G0838 Vigna mungo HOM05D001237 ORTHO05D001827 2.4e-06 55.1 37 78.4
AL3G18350 Arabidopsis lyrata HOM05D001237 ORTHO05D001827 3.2e-06 54.7 37 78.4
AL8G21870 Arabidopsis lyrata HOM05D001237 ORTHO05D001827 3.2e-06 54.7 37 75.7
Carub.0003s0663 Capsella rubella HOM05D001237 ORTHO05D001827 3.2e-06 54.7 37 78.4
Carub.0008s0851 Capsella rubella HOM05D001237 ORTHO05D001827 3.2e-06 54.7 37 75.7
COL.COLO4_09875 Corchorus olitorius HOM05D001237 ORTHO05D001827 3.2e-06 54.7 37 73.0
Duzib133G1501 Durio zibethinus HOM05D001237 ORTHO05D001827 3.2e-06 54.7 37 78.4
Migut.G00675 Erythranthe guttata HOM05D001237 ORTHO05D001827 3.2e-06 54.7 37 75.7
Glyma.09G024000 Glycine max HOM05D001237 ORTHO05D001827 3.2e-06 54.7 37 75.7
Gohir.A11G138100 Gossypium hirsutum HOM05D001237 ORTHO05D001827 3.2e-06 54.7 37 75.7
Gohir.D11G144400 Gossypium hirsutum HOM05D001237 ORTHO05D001827 3.2e-06 54.7 37 75.7
Lj3g0014686 Lotus japonicus HOM05D001237 ORTHO05D001827 3.2e-06 54.7 37 73.0
MD04G1008000 Malus domestica HOM05D001237 ORTHO05D001827 3.2e-06 54.7 36 77.8
AT3G07110 Arabidopsis thaliana HOM05D001237 ORTHO05D001827 4.1e-06 54.3 37 78.4
arahy.Tifrunner.gnm1.ann1.D8UPNS Arachis hypogaea HOM05D001237 ORTHO05D001827 4.1e-06 54.3 37 75.7
arahy.Tifrunner.gnm1.ann1.QF6RLP Arachis hypogaea HOM05D001237 ORTHO05D001827 4.1e-06 54.3 37 75.7
arahy.Tifrunner.gnm1.ann1.RK9T7W Arachis hypogaea HOM05D001237 ORTHO05D001827 4.1e-06 54.3 37 75.7
arahy.Tifrunner.gnm1.ann1.Z3ML6G Arachis hypogaea HOM05D001237 ORTHO05D001827 4.1e-06 54.3 37 75.7
MSTRG.9815 Avicennia marina HOM05D001237 ORTHO05D001827 4.1e-06 54.3 37 73.0
Cc01_g17000 Coffea canephora HOM05D001237 ORTHO05D001827 4.1e-06 54.3 37 78.4
ECA236G3330 Erigeron canadensis HOM05D001237 ORTHO05D001827 4.1e-06 54.3 37 75.7
Glyma.08G353900 Glycine max HOM05D001237 ORTHO05D001827 4.1e-06 54.3 37 78.4
Lj3g0018567 Lotus japonicus HOM05D001237 ORTHO05D001827 4.1e-06 54.3 37 73.0
Prupe.1G006700 Prunus persica HOM05D001237 ORTHO05D001827 4.1e-06 54.3 36 77.8
Sed0015888 Sechium edule HOM05D001237 ORTHO05D001827 4.1e-06 54.3 36 80.6
TAR365G0914 Trochodendron aralioides HOM05D001237 ORTHO05D001827 4.1e-06 54.3 37 75.7
TAR636G2314 Trochodendron aralioides HOM05D001237 ORTHO05D001827 4.1e-06 54.3 37 75.7
Haze_24804 Corylus avellana HOM05D001237 ORTHO05D001827 5.4e-06 53.9 37 75.7
Dinv29590 Davidia involucrata HOM05D001237 ORTHO05D001827 5.4e-06 53.9 36 80.6
Thecc.04G205000 Theobroma cacao HOM05D001237 ORTHO05D001827 5.4e-06 53.9 37 73.0
EL10Ac7g17840 Beta vulgaris HOM05D001237 ORTHO05D001827 7.0e-06 53.5 37 73.0
CiPaw.02G066600 Carya illinoinensis HOM05D001237 ORTHO05D001827 7.0e-06 53.5 37 73.0
Thhalv10004924m.g Eutrema salsugineum HOM05D001237 ORTHO05D001827 7.0e-06 53.5 37 73.0
Thhalv10021532m.g Eutrema salsugineum HOM05D001237 ORTHO05D001827 7.0e-06 53.5 37 75.7
FvH4_4g15860 Fragaria vesca HOM05D001237 ORTHO05D001827 7.0e-06 53.5 36 75.0
HanXRQChr01g0015151 Helianthus annuus HOM05D001237 ORTHO05D001827 7.0e-06 53.5 37 75.7
MD00G1018900 Malus domestica HOM05D001237 ORTHO05D001827 7.0e-06 53.5 36 77.8
Manes.03G148400 Manihot esculenta HOM05D001237 ORTHO05D001827 7.0e-06 53.5 37 73.0
Manes.15G053100 Manihot esculenta HOM05D001237 ORTHO05D001827 7.0e-06 53.5 37 73.0
RcHm_v2.0_Chr6g0284831 Rosa chinensis HOM05D001237 ORTHO05D001827 7.0e-06 53.5 37 73.0
Actinidia30075 Actinidia chinensis HOM05D001237 ORTHO05D001827 9.2e-06 53.1 37 75.7
AL3G40600 Arabidopsis lyrata HOM05D001237 ORTHO05D001827 9.2e-06 53.1 37 75.7
AUR62001883 Chenopodium quinoa HOM05D001237 ORTHO05D001827 9.2e-06 53.1 37 73.0
AUR62036500 Chenopodium quinoa HOM05D001237 ORTHO05D001827 9.2e-06 53.1 37 73.0
Glyma.15G130000 Glycine max HOM05D001237 ORTHO05D001827 9.2e-06 53.1 37 73.0
Lj2A1130T54 Lonicera japonica HOM05D001237 ORTHO05D001827 9.2e-06 53.1 37 75.7
Sc17g0002320 Simmondsia chinensis HOM05D001237 ORTHO05D001827 9.2e-06 53.1 36 75.0
Sc17g0002370 Simmondsia chinensis HOM05D001237 ORTHO05D001827 9.2e-06 53.1 36 75.0


User provided reference genes

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