Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 1.1e-226 789.6 390 100.0
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 3.0e-165 585.5 378 79.4
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 3.8e-160 568.5 378 75.9
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 3.6e-158 562.0 410 70.7
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 6.1e-158 561.2 378 75.4
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 1.4e-157 560.1 382 74.6
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 1.4e-157 560.1 386 74.9
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.4e-157 560.1 382 74.3
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 1.8e-157 559.7 385 73.0
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 4.0e-157 558.5 377 75.3
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 4.0e-157 558.5 383 74.4
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 8.9e-157 557.4 378 74.9
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 1.2e-156 557.0 383 74.7
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 1.2e-156 557.0 386 72.8
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.2e-156 557.0 388 73.5
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 2.6e-156 555.8 386 73.6
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 7.5e-156 554.3 382 74.6
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 9.8e-156 553.9 382 73.0
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 1.3e-155 553.5 382 73.3
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 1.7e-155 553.1 377 74.0
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 3.7e-155 552.0 382 74.9
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.4e-154 550.1 379 74.7
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 2.4e-154 549.3 377 73.5
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 3.2e-154 548.9 381 73.0
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 4.1e-154 548.5 382 72.3
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 4.1e-154 548.5 382 74.3
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 4.1e-154 548.5 384 72.7
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 4.1e-154 548.5 378 73.3
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 5.4e-154 548.1 386 72.5
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 1.6e-153 546.6 382 72.3
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.6e-153 546.6 382 72.3
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 3.5e-153 545.4 377 73.7
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 3.5e-153 545.4 378 73.3
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 4.6e-153 545.0 386 72.5
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 2.3e-152 542.7 378 73.5
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 1.5e-151 540.0 392 70.7
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 1.5e-151 540.0 382 72.5
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 7.3e-151 537.7 378 72.8
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 2.8e-150 535.8 376 72.9
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 3.6e-150 535.4 344 77.3
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 8.0e-150 534.3 381 71.4
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 2.3e-149 532.7 381 71.4
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 3.4e-148 528.9 397 69.0
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 2.2e-147 526.2 386 70.2
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 8.3e-147 524.2 337 78.9
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 2.4e-146 522.7 382 70.2
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 9.2e-146 520.8 381 70.6
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.6e-145 520.0 361 73.7
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 2.7e-145 519.2 382 69.1
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 7.8e-145 517.7 386 69.4
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 3.0e-144 515.8 382 69.6
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 5.0e-144 515.0 382 69.9
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 6.6e-144 514.6 360 73.9
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 8.6e-144 514.2 384 69.0
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 1.1e-143 513.8 380 70.5
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 1.5e-143 513.5 359 72.1
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 2.5e-143 512.7 380 70.0
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 1.2e-142 510.4 383 68.1
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 2.1e-142 509.6 383 70.0
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 6.2e-142 508.1 347 74.6
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 3.1e-141 505.8 341 74.8
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 6.8e-141 504.6 383 68.1
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 1.2e-140 503.8 383 67.4
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 4.4e-140 501.9 403 64.8
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 5.8e-140 501.5 386 68.9
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 9.8e-140 500.7 423 63.4
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 4.9e-139 498.4 382 68.6
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 1.1e-138 497.3 386 67.6
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 4.1e-138 495.4 338 74.3
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 9.2e-138 494.2 325 77.8
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 9.2e-138 494.2 384 67.4
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 1.2e-137 493.8 385 66.2
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 1.6e-137 493.4 345 71.9
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 2.7e-137 492.7 385 68.6
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 3.5e-137 492.3 385 65.5
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.0e-136 490.7 376 68.6
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 1.3e-136 490.3 370 68.9
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 2.3e-136 489.6 344 71.5
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 3.9e-136 488.8 369 69.1
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 5.1e-136 488.4 377 67.9
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.5e-135 486.9 387 66.7
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 1.9e-135 486.5 343 70.8
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 7.3e-135 484.6 377 67.4
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 9.5e-135 484.2 338 70.4
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.2e-134 483.8 339 72.9
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 1.6e-134 483.4 358 70.9
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 2.1e-134 483.0 356 71.6
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 4.0e-133 478.8 340 72.1
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 6.8e-133 478.0 332 72.0
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 1.2e-132 477.2 339 69.3
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.5e-132 476.9 374 68.2
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 3.4e-132 475.7 340 70.9
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 4.4e-132 475.3 337 71.8
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 7.6e-132 474.6 343 69.7
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 9.9e-132 474.2 338 70.1
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 3.2e-130 469.2 348 68.7
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 4.1e-130 468.8 382 64.7
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 1.6e-129 466.8 340 70.3
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 3.5e-129 465.7 332 71.1
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 2.3e-128 463.0 355 66.2
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 3.9e-128 462.2 359 68.8
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 5.1e-128 461.8 322 73.0
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 1.1e-127 460.7 356 66.0
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 1.9e-127 459.9 344 68.6
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 3.3e-127 459.1 337 68.5
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 7.3e-127 458.0 372 64.2
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 9.6e-127 457.6 338 68.0
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 9.6e-127 457.6 373 64.1
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 1.6e-126 456.8 334 68.9
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 1.6e-126 456.8 378 63.8
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 1.8e-125 453.4 337 67.4
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 2.4e-125 453.0 337 66.8
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 2.4e-125 453.0 398 61.3
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 3.1e-125 452.6 338 67.2
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 3.1e-125 452.6 338 67.5
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 4.0e-125 452.2 323 71.8
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 5.2e-125 451.8 320 71.6
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 8.9e-125 451.1 335 66.0
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 1.5e-124 450.3 268 82.5
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 4.4e-124 448.7 338 66.6
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 4.4e-124 448.7 366 63.7
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 5.8e-124 448.4 338 66.6
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 6.6e-120 434.9 356 61.8
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 1.5e-119 433.7 346 64.2
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 4.8e-118 428.7 342 65.2
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 2.4e-117 426.4 306 72.9
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 5.3e-117 425.2 558 45.5
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 1.3e-115 420.6 266 79.7
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 4.6e-113 412.1 383 58.5
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 8.1e-110 401.4 317 68.1
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 5.8e-100 368.6 339 58.4
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 1.3e-99 367.5 231 79.2
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 2.8e-94 349.7 364 51.9
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 1.1e-93 347.8 373 50.9
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 1.4e-90 337.4 279 64.2
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.6e-89 334.0 261 64.8
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 7.4e-87 325.1 221 74.7
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 1.1e-85 321.2 305 55.4
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 5.3e-85 318.9 202 79.7
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 7.7e-84 315.1 261 64.0
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 1.1e-82 311.2 267 62.2
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 5.0e-75 285.8 221 67.0
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 7.2e-74 282.0 217 68.7
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 4.4e-71 272.7 163 84.0
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 5.0e-67 259.2 389 40.9
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 2.7e-60 236.9 175 67.4
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 7.7e-60 235.3 211 59.7
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.9e-59 233.4 171 70.2
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 1.6e-57 227.6 161 70.2
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 8.0e-57 225.3 176 68.8
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 6.5e-51 205.7 267 48.3
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 1.9e-50 204.1 175 60.0
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 3.7e-46 189.9 231 49.8
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 7.7e-44 182.2 336 39.0
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 2.4e-37 160.6 115 71.3
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 1.5e-26 124.8 385 32.5
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 4.3e-26 123.2 125 51.2
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 2.1e-25 120.9 71 85.9
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 8.1e-25 119.0 248 37.9
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 2.3e-24 117.5 251 32.3
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 8.3e-22 109.0 63 77.8
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 1.2e-20 105.1 69 69.6
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.5e-18 98.2 217 34.6
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 4.3e-18 96.7 57 80.7
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 5.6e-18 96.3 60 81.7
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 3.4e-15 87.0 106 48.1
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 6.6e-11 72.8 57 57.9
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 1.1e-08 65.5 88 40.9
Cfa023540 Carpinus fangiana HOM05D000112 ORTHO05D001327 7.6e-07 59.3 35 71.4
Gohir.D08G092932 Gossypium hirsutum HOM05D004315 ORTHO05D217518 2.2e-06 57.8 46 60.9


User provided reference genes

Program Settings