Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044703.1 Olea europaea HOM05D004854 ORTHO05D005854 1.0e-28 130.2 117 100.0
Oeu044701.1 Olea europaea HOM05D004854 ORTHO05D005854 9.8e-27 123.6 68 95.6
Oeu064534.1 Olea europaea HOM05D004854 ORTHO05D005854 4.9e-26 121.3 68 92.6
Dinv26446 Davidia involucrata HOM05D004854 ORTHO05D005854 1.6e-24 116.3 68 89.7
Oeu000974.1 Olea europaea HOM05D004854 ORTHO05D005854 2.7e-24 115.5 68 86.8
MSTRG.26532 Avicennia marina HOM05D004854 ORTHO05D005854 4.6e-24 114.8 68 88.2
SGA_v2.0_scaffold41G15867 Striga asiatica HOM05D004854 ORTHO05D005854 4.6e-24 114.8 68 86.8
SGA_v2.0_scaffold21G09635 Striga asiatica HOM05D004854 ORTHO05D005854 5.0e-23 111.3 68 83.8
Dinv25401 Davidia involucrata HOM05D004854 ORTHO05D005854 6.6e-23 110.9 68 82.4
Rhsim01G0120500 Rhododendron simsii HOM05D004854 ORTHO05D005854 6.6e-23 110.9 67 85.1
Migut.J00819 Erythranthe guttata HOM05D004854 ORTHO05D005854 1.9e-22 109.4 68 80.9
vmacro20836 Vaccinium macrocarpon HOM05D004854 ORTHO05D005854 1.9e-22 109.4 68 80.9
MSTRG.19386 Avicennia marina HOM05D004854 ORTHO05D005854 2.5e-22 109.0 68 83.8
CSS0022850 Camellia sinensis var. sinensis HOM05D004854 ORTHO05D005854 3.3e-22 108.6 67 82.1
PGR044G2628 Punica granatum HOM05D004854 ORTHO05D005854 7.3e-22 107.5 68 82.4
PGR109G0004 Punica granatum HOM05D004854 ORTHO05D005854 7.3e-22 107.5 68 82.4
QL11p004841 Quercus lobata HOM05D004854 ORTHO05D005854 7.3e-22 107.5 68 79.4
Peaxi162Scf00324g00719 Petunia axillaris HOM05D004854 ORTHO05D005854 9.5e-22 107.1 68 80.9
Potri.003G010200 Populus trichocarpa HOM05D004854 ORTHO05D005854 1.6e-21 106.3 69 81.2
Cfa013427 Carpinus fangiana HOM05D004854 ORTHO05D005854 2.1e-21 105.9 67 80.6
Dinv25400 Davidia involucrata HOM05D004854 ORTHO05D005854 2.1e-21 105.9 66 80.3
Nitab4.5_0000074g0010 Nicotiana tabacum HOM05D004854 ORTHO05D005854 2.1e-21 105.9 68 79.4
Nitab4.5_0012849g0010 Nicotiana tabacum HOM05D004854 ORTHO05D005854 2.1e-21 105.9 68 79.4
Eucgr.C02261 Eucalyptus grandis HOM05D004854 ORTHO05D005854 3.6e-21 105.1 67 80.6
Eucgr.C02263 Eucalyptus grandis HOM05D004854 ORTHO05D005854 3.6e-21 105.1 67 80.6
CANSAT11G1984 Cannabis sativa HOM05D004854 ORTHO05D005854 6.2e-21 104.4 68 80.9
CiPaw.08G034100 Carya illinoinensis HOM05D004854 ORTHO05D005854 6.2e-21 104.4 68 80.9
SalBow5G3614 Salvia bowleyana HOM05D004854 ORTHO05D005854 6.2e-21 104.4 68 83.8
Sc26g0002890 Simmondsia chinensis HOM05D004854 ORTHO05D005854 6.2e-21 104.4 68 75.0
Sed0005886 Sechium edule HOM05D004854 ORTHO05D005854 8.0e-21 104.0 68 77.9
GSVIVG01010910001 Vitis vinifera HOM05D004854 ORTHO05D005854 8.0e-21 104.0 67 79.1
CAN.G86.2 Capsicum annuum HOM05D004854 ORTHO05D005854 1.1e-20 103.6 68 76.5
PGSC0003DMG400008513 Solanum tuberosum HOM05D004854 ORTHO05D005854 1.1e-20 103.6 68 76.5
Potri.009G032600 Populus trichocarpa HOM05D004854 ORTHO05D005854 1.4e-20 103.2 69 79.7
Sed0001835 Sechium edule HOM05D004854 ORTHO05D005854 1.8e-20 102.8 68 77.9
Actinidia39348 Actinidia chinensis HOM05D000406 ORTHO05D003425 2.3e-20 102.4 67 77.6
Solyc07g009330.4 Solanum lycopersicum HOM05D004854 ORTHO05D005854 3.1e-20 102.1 68 75.0
TAR625G0051 Trochodendron aralioides HOM05D004854 ORTHO05D005854 3.1e-20 102.1 67 77.6
CDE05G0266 Ceratophyllum demersum HOM05D000177 ORTHO05D008165 4.0e-20 101.7 67 79.1
CDE05G2165 Ceratophyllum demersum HOM05D004854 ORTHO05D005854 4.0e-20 101.7 67 79.1
CsaV3_2G008580 Cucumis sativus L. HOM05D004854 ORTHO05D005854 4.0e-20 101.7 68 76.5
Eucgr.A01410 Eucalyptus grandis HOM05D004854 ORTHO05D005854 4.0e-20 101.7 67 77.6
Actinidia29956 Actinidia chinensis HOM05D004854 ORTHO05D005854 6.8e-20 100.9 68 76.5
MBI13_g31550_MAGBIO Magnolia biondii HOM05D004854 ORTHO05D005854 6.8e-20 100.9 68 75.0
MELO3C003999.2 Cucumis melo HOM05D004854 ORTHO05D005854 8.9e-20 100.5 68 75.0
Sabra03G0005200 Salix brachista HOM05D004854 ORTHO05D005854 8.9e-20 100.5 69 76.8
Sopen07g005080 Solanum pennellii HOM05D004854 ORTHO05D005854 8.9e-20 100.5 68 73.5
TWI38G1790 Tripterygium wilfordii HOM05D004854 ORTHO05D005854 8.9e-20 100.5 68 73.5
TWI18G0069 Tripterygium wilfordii HOM05D004854 ORTHO05D005854 1.2e-19 100.1 68 73.5
Atru.chr12.1305 Acer truncatum HOM05D004854 ORTHO05D005854 1.5e-19 99.8 68 73.5
TWI38G2070 Tripterygium wilfordii HOM05D004854 ORTHO05D005854 1.5e-19 99.8 68 72.1
Manes.06G021300 Manihot esculenta HOM05D004854 ORTHO05D005854 2.0e-19 99.4 69 76.8
A02p08620 Brassica napus HOM05D004854 ORTHO05D005854 2.6e-19 99.0 68 76.5
ClCG11G011930 Citrullus lanatus HOM05D004854 ORTHO05D005854 2.6e-19 99.0 68 75.0
Cc06_g22110 Coffea canephora HOM05D004854 ORTHO05D005854 2.6e-19 99.0 68 72.1
Duzib150G0904 Durio zibethinus HOM05D004854 ORTHO05D005854 2.6e-19 99.0 68 76.5
Gohir.A05G003400 Gossypium hirsutum HOM05D004854 ORTHO05D005854 2.6e-19 99.0 68 75.0
Gohir.D05G003800 Gossypium hirsutum HOM05D004854 ORTHO05D005854 2.6e-19 99.0 68 75.0
Gorai.009G003400 Gossypium raimondii HOM05D004854 ORTHO05D005854 2.6e-19 99.0 68 75.0
HanXRQChr10g0297881 Helianthus annuus HOM05D004854 ORTHO05D005854 2.6e-19 99.0 68 76.5
Os06g0701400 Oryza sativa ssp. japonica HOM05D004854 ORTHO05D005854 2.6e-19 99.0 68 75.0
AL7G27120 Arabidopsis lyrata HOM05D004854 ORTHO05D005854 3.4e-19 98.6 68 76.5
AL8G33260 Arabidopsis lyrata HOM05D004854 ORTHO05D005854 4.4e-19 98.2 68 75.0
BcaB05g22334 Brassica carinata HOM05D004854 ORTHO05D005854 4.4e-19 98.2 68 75.0
BcaC04g19981 Brassica carinata HOM05D004854 ORTHO05D005854 4.4e-19 98.2 68 75.0
BraA02t05931Z Brassica rapa HOM05D004854 ORTHO05D005854 5.8e-19 97.8 68 75.0
ECA247G3496 Erigeron canadensis HOM05D004854 ORTHO05D005854 9.8e-19 97.1 68 73.5
Migut.L01900 Erythranthe guttata HOM05D004854 ORTHO05D005854 9.8e-19 97.1 61 80.3
Cpa.g.sc95.32 Carica papaya HOM05D004854 ORTHO05D005854 1.3e-18 96.7 68 75.0
Lsat_1_v5_gn_9_31040 Lactuca sativa HOM05D004854 ORTHO05D005854 1.3e-18 96.7 68 73.5
Ah.05g168230 Amaranthus hybridus HOM05D004854 ORTHO05D005854 1.7e-18 96.3 68 72.1
Os01g0231700 Oryza sativa ssp. japonica HOM05D004854 ORTHO05D005854 1.7e-18 96.3 68 72.1
Sabra09G0023200 Salix brachista HOM05D004854 ORTHO05D005854 1.7e-18 96.3 68 75.0
Sp6g19020 Schrenkiella parvula HOM05D004854 ORTHO05D005854 1.7e-18 96.3 68 75.0
Sp7g23910 Schrenkiella parvula HOM05D004854 ORTHO05D005854 1.7e-18 96.3 68 75.0
Ah.16g108570 Amaranthus hybridus HOM05D004854 ORTHO05D005854 2.9e-18 95.5 68 72.1
AT4G25890 Arabidopsis thaliana HOM05D004854 ORTHO05D005854 2.9e-18 95.5 68 73.5
BcaC03g14166 Brassica carinata HOM05D004854 ORTHO05D005854 2.9e-18 95.5 68 72.1
BolC9t57762H Brassica oleracea HOM05D004854 ORTHO05D005854 2.9e-18 95.5 68 72.1
BraA10t43555Z Brassica rapa HOM05D004854 ORTHO05D005854 2.9e-18 95.5 68 72.1
CARHR233360 Cardamine hirsuta HOM05D004854 ORTHO05D005854 2.9e-18 95.5 68 75.0
AUR62026626 Chenopodium quinoa HOM05D004854 ORTHO05D005854 2.9e-18 95.5 68 70.6
Phvul.002G259300 Phaseolus vulgaris HOM05D004854 ORTHO05D005854 2.9e-18 95.5 68 72.1
THA.LOC104813509 Tarenaya hassleriana HOM05D004854 ORTHO05D005854 2.9e-18 95.5 68 72.1
Thhalv10026301m.g Eutrema salsugineum HOM05D004854 ORTHO05D005854 4.9e-18 94.7 68 73.5
Thecc.09G180300 Theobroma cacao HOM05D004854 ORTHO05D005854 4.9e-18 94.7 68 72.1
arahy.Tifrunner.gnm1.ann1.9B8HPN Arachis hypogaea HOM05D004854 ORTHO05D005854 6.4e-18 94.4 68 72.1
arahy.Tifrunner.gnm1.ann1.P9UE85 Arachis hypogaea HOM05D004854 ORTHO05D005854 6.4e-18 94.4 68 72.1
MD16G1253100 Malus domestica HOM05D004854 ORTHO05D005854 6.4e-18 94.4 68 73.5
PGR142G3975 Punica granatum HOM05D004854 ORTHO05D005854 6.4e-18 94.4 68 69.1
THA.LOC104811780 Tarenaya hassleriana HOM05D004854 ORTHO05D005854 6.4e-18 94.4 68 70.6
unitig_899.g15189 Utricularia gibba HOM05D004854 ORTHO05D005854 6.4e-18 94.4 68 73.5
Prupe.1G079500 Prunus persica HOM05D004854 ORTHO05D005854 8.3e-18 94.0 68 73.5
VMungo0251G0447 Vigna mungo HOM05D004854 ORTHO05D005854 8.3e-18 94.0 68 72.1
Carub.0008s1780 Capsella rubella HOM05D004854 ORTHO05D005854 1.1e-17 93.6 68 72.1
AUR62034880 Chenopodium quinoa HOM05D004854 ORTHO05D005854 1.1e-17 93.6 68 69.1
MD13G1245200 Malus domestica HOM05D004854 ORTHO05D005854 1.1e-17 93.6 68 72.1
A10p14720 Brassica napus HOM05D004854 ORTHO05D005854 1.4e-17 93.2 68 70.6
C09p49130 Brassica napus HOM05D004854 ORTHO05D005854 1.4e-17 93.2 68 70.6
arahy.Tifrunner.gnm1.ann1.AP25S4 Arachis hypogaea HOM05D004854 ORTHO05D005854 1.9e-17 92.8 68 70.6
C02p14390 Brassica napus HOM05D004854 ORTHO05D005854 1.9e-17 92.8 68 69.1
BolC2t07563H Brassica oleracea HOM05D004854 ORTHO05D005854 1.9e-17 92.8 68 69.1
Ciclev10002863m.g Citrus clementina HOM05D004854 ORTHO05D005854 1.9e-17 92.8 69 71.0
DCAR_003035 Daucus carota HOM05D004854 ORTHO05D005854 1.9e-17 92.8 69 72.5
Glyma.08G131500 Glycine max HOM05D004854 ORTHO05D005854 1.9e-17 92.8 68 72.1
TAR636G3485 Trochodendron aralioides HOM05D004854 ORTHO05D005854 1.9e-17 92.8 60 76.7
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 2.4e-17 92.4 66 71.2
Thecc.01G294400 Theobroma cacao HOM05D004854 ORTHO05D005854 2.4e-17 92.4 68 67.6
arahy.Tifrunner.gnm1.ann1.XNR1AK Arachis hypogaea HOM05D004854 ORTHO05D005854 3.2e-17 92.0 68 69.1
CARHR271090 Cardamine hirsuta HOM05D004854 ORTHO05D005854 3.2e-17 92.0 68 72.1
AT5G57290 Arabidopsis thaliana HOM05D004854 ORTHO05D005854 4.1e-17 91.7 65 72.3
SEGI_03932 Sequoiadendron giganteum HOM05D004854 ORTHO05D005854 4.1e-17 91.7 68 66.2
Zm00001eb226990 Zea mays HOM05D004854 ORTHO05D005854 5.4e-17 91.3 68 69.1
Glyma.05G174300 Glycine max HOM05D004854 ORTHO05D005854 7.0e-17 90.9 68 70.6
Thhalv10015037m.g Eutrema salsugineum HOM05D004854 ORTHO05D005854 1.2e-16 90.1 68 69.1
FvH4_4g07630 Fragaria vesca HOM05D004854 ORTHO05D005854 1.2e-16 90.1 67 73.1
FAN07G2001 Fragaria x ananassa HOM05D004854 ORTHO05D005854 1.2e-16 90.1 67 73.1
FAN12G2445 Fragaria x ananassa HOM05D004854 ORTHO05D005854 1.2e-16 90.1 67 73.1
FAN17G2475 Fragaria x ananassa HOM05D004854 ORTHO05D005854 1.2e-16 90.1 67 73.1
FAN22G0664 Fragaria x ananassa HOM05D004854 ORTHO05D005854 1.6e-16 89.7 68 72.1
Psat7g058720 Pisum sativum HOM05D004854 ORTHO05D005854 1.6e-16 89.7 68 69.1
Hund26676 Selenicereus undatus HOM05D004854 ORTHO05D005854 1.6e-16 89.7 68 66.2
Ca_17781_v3 Cicer arietinum L. HOM05D004854 ORTHO05D005854 2.1e-16 89.4 68 67.6
Aa31LG3G13170 Aethionema arabicum HOM05D004854 ORTHO05D005854 2.7e-16 89.0 68 67.6
Carub.0007s1506 Capsella rubella HOM05D004854 ORTHO05D005854 2.7e-16 89.0 68 70.6
Zm00001eb272850 Zea mays HOM05D004854 ORTHO05D005854 2.7e-16 89.0 69 69.6
arahy.Tifrunner.gnm1.ann1.P39ID1 Arachis hypogaea HOM05D004854 ORTHO05D005854 3.5e-16 88.6 68 67.6
Lalb_Chr07g0185421 Lupinus albus HOM05D004854 ORTHO05D005854 3.5e-16 88.6 68 69.1
PSO423G0276 Papaver somniferum HOM05D004854 ORTHO05D005854 4.6e-16 88.2 68 63.2
ATR0626G247 Amborella trichopoda HOM05D004854 ORTHO05D005854 6.0e-16 87.8 62 75.8
Lj4g0022898 Lotus japonicus HOM05D004854 ORTHO05D005854 6.0e-16 87.8 68 67.6
Medtr8g089790 Medicago truncatula HOM05D004854 ORTHO05D005854 6.0e-16 87.8 68 64.7
BcaB08g36089 Brassica carinata HOM05D004854 ORTHO05D005854 7.8e-16 87.4 67 68.7
PSO596G0050 Papaver somniferum HOM05D004854 ORTHO05D005854 7.8e-16 87.4 68 63.2
SGA_v2.0_scaffold46G17340 Striga asiatica HOM05D004854 ORTHO05D005854 7.8e-16 87.4 68 69.1
PSO596G0067 Papaver somniferum HOM05D004854 ORTHO05D005854 1.0e-15 87.0 67 64.2
RcHm_v2.0_Chr4g0400241 Rosa chinensis HOM05D004854 ORTHO05D005854 3.0e-15 85.5 67 68.7
arahy.Tifrunner.gnm1.ann1.90PU0B Arachis hypogaea HOM05D004854 ORTHO05D005854 5.1e-15 84.7 68 63.2
PSO423G0052 Papaver somniferum HOM05D004854 ORTHO05D005854 5.1e-15 84.7 67 62.7
Lj6g0003516 Lotus japonicus HOM05D004854 ORTHO05D005854 6.6e-15 84.3 68 63.2
Lalb_Chr13g0295841 Lupinus albus HOM05D004854 ORTHO05D005854 8.6e-15 84.0 68 64.7
TPR.G6298 Trifolium pratense HOM05D004854 ORTHO05D005854 8.6e-15 84.0 68 64.7
RcHm_v2.0_Chr1g0341131 Rosa chinensis HOM05D004854 ORTHO05D005854 7.3e-14 80.9 67 65.7
Nn2g12744 Nelumbo nucifera HOM05D004854 ORTHO05D005854 1.4e-12 76.6 46 80.4
HPP92_026146 Vanilla planifolia HOM05D003573 ORTHO05D004204 1.4e-12 76.6 64 62.5
Duzib170G0267 Durio zibethinus HOM05D004854 ORTHO05D005854 7.5e-11 70.9 42 81.0
Pp3c21_16160 Physcomitrium patens HOM05D004854 ORTHO05D005854 7.5e-11 70.9 70 55.7
Pp3c22_2920 Physcomitrium patens HOM05D004854 ORTHO05D005854 9.9e-11 70.5 70 57.1
COL.COLO4_25466 Corchorus olitorius HOM05D004854 ORTHO05D005854 4.9e-10 68.2 42 78.6
Mapoly0006s0174 Marchantia polymorpha HOM05D004854 ORTHO05D005854 4.9e-10 68.2 70 51.4
C03p15060 Brassica napus HOM05D004854 ORTHO05D005854 6.4e-10 67.8 64 60.9
arahy.Tifrunner.gnm1.ann1.63P7R9 Arachis hypogaea HOM05D000970 ORTHO05D000788 1.4e-09 66.6 50 70.0
Duzib168G1583 Durio zibethinus HOM05D004854 ORTHO05D005854 1.2e-08 63.5 46 63.0
BolC3t13948H Brassica oleracea HOM05D004854 ORTHO05D005854 3.5e-08 62.0 53 66.0
SMO172G0233 Selaginella moellendorffii HOM05D004854 ORTHO05D005854 3.5e-08 62.0 68 45.6


User provided reference genes

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