Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044502.1 Olea europaea HOM05D006285 ORTHO05D007249 1.2e-95 353.2 177 100.0
Oeu019430.1 Olea europaea HOM05D006285 ORTHO05D007249 2.9e-62 242.3 156 80.1
Dinv19860 Davidia involucrata HOM05D006285 ORTHO05D007249 8.7e-43 177.6 189 55.6
Actinidia34008 Actinidia chinensis HOM05D006285 ORTHO05D007249 9.6e-42 174.1 194 52.1
Actinidia09609 Actinidia chinensis HOM05D006285 ORTHO05D007249 1.1e-40 170.6 198 51.0
MSTRG.467 Avicennia marina HOM05D006285 ORTHO05D007249 1.1e-40 170.6 184 56.5
Gohir.D01G019500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 2.4e-40 169.5 184 56.5
Gorai.002G021800 Gossypium raimondii HOM05D006285 ORTHO05D007249 2.4e-40 169.5 184 56.5
Thecc.02G195800 Theobroma cacao HOM05D006285 ORTHO05D007249 1.2e-39 167.2 187 51.3
Ciclev10032858m.g Citrus clementina HOM05D006285 ORTHO05D007249 7.6e-39 164.5 179 54.2
Manes.09G186200 Manihot esculenta HOM05D006285 ORTHO05D007249 7.6e-39 164.5 188 52.7
PGR057G0008 Punica granatum HOM05D006285 ORTHO05D007249 2.2e-38 162.9 182 52.7
PGR119G0305 Punica granatum HOM05D006285 ORTHO05D007249 2.2e-38 162.9 182 52.7
GSVIVG01000967001 Vitis vinifera HOM05D006285 ORTHO05D007249 3.8e-38 162.2 188 51.1
CSS0034430 Camellia sinensis var. sinensis HOM05D006285 ORTHO05D007249 4.9e-38 161.8 201 52.7
Duzib248G1203 Durio zibethinus HOM05D006285 ORTHO05D007249 6.4e-38 161.4 188 50.5
MSTRG.8043 Avicennia marina HOM05D006285 ORTHO05D007249 1.1e-37 160.6 185 56.2
Potri.003G165000 Populus trichocarpa HOM05D006285 ORTHO05D007249 1.1e-37 160.6 189 54.0
Gohir.D02G174500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 4.2e-37 158.7 190 50.0
Gorai.005G196200 Gossypium raimondii HOM05D006285 ORTHO05D007249 5.4e-37 158.3 190 50.5
Potri.001G062500 Populus trichocarpa HOM05D006285 ORTHO05D007249 2.1e-36 156.4 190 52.1
Gohir.A03G151500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 3.5e-36 155.6 190 50.0
AT5G13220 Arabidopsis thaliana HOM05D006285 ORTHO05D007249 7.9e-36 154.5 188 52.7
CANSAT01G0254 Cannabis sativa HOM05D006285 ORTHO05D007249 7.9e-36 154.5 189 51.3
QL03p050117 Quercus lobata HOM05D006285 ORTHO05D007249 1.7e-35 153.3 182 51.6
BolC2t06542H Brassica oleracea HOM05D006285 ORTHO05D007249 2.3e-35 152.9 186 50.5
BraA02t05154Z Brassica rapa HOM05D006285 ORTHO05D007249 3.9e-35 152.1 188 50.5
BcaNung01870 Brassica carinata HOM05D006285 ORTHO05D007249 5.1e-35 151.8 187 51.3
BcaNung01871 Brassica carinata HOM05D006285 ORTHO05D007249 5.1e-35 151.8 187 51.3
A02p01780 Brassica napus HOM05D006285 ORTHO05D007249 5.1e-35 151.8 188 50.5
Rhsim12G0098900 Rhododendron simsii HOM05D006285 ORTHO05D007249 5.1e-35 151.8 187 51.9
Sabra03G0120200 Salix brachista HOM05D006285 ORTHO05D007249 8.7e-35 151.0 207 49.8
TWI18G1468 Tripterygium wilfordii HOM05D006285 ORTHO05D007249 8.7e-35 151.0 190 48.9
Peaxi162Scf00128g00175 Petunia axillaris HOM05D006285 ORTHO05D007249 1.5e-34 150.2 185 51.9
COL.COLO4_20246 Corchorus olitorius HOM05D006285 ORTHO05D007249 1.9e-34 149.8 192 47.9
Duzib052G0121 Durio zibethinus HOM05D006285 ORTHO05D007249 2.5e-34 149.4 187 48.1
Sabra01G0044900 Salix brachista HOM05D006285 ORTHO05D007249 5.6e-34 148.3 190 51.1
BcaC04g19135 Brassica carinata HOM05D006285 ORTHO05D007249 9.6e-34 147.5 186 49.5
C02p05990 Brassica napus HOM05D006285 ORTHO05D007249 1.3e-33 147.1 186 51.1
BolC9t59226H Brassica oleracea HOM05D006285 ORTHO05D007249 1.3e-33 147.1 187 48.7
CiPaw.05G103600 Carya illinoinensis HOM05D006285 ORTHO05D007249 1.3e-33 147.1 188 49.5
Sp6g30770 Schrenkiella parvula HOM05D006285 ORTHO05D007249 1.3e-33 147.1 184 50.0
C03p06880 Brassica napus HOM05D006285 ORTHO05D007249 1.6e-33 146.7 186 47.8
C09p63860 Brassica napus HOM05D006285 ORTHO05D007249 1.6e-33 146.7 187 48.7
BolC3t13190H Brassica oleracea HOM05D006285 ORTHO05D007249 1.6e-33 146.7 186 47.8
A10p24990 Brassica napus HOM05D006285 ORTHO05D007249 2.8e-33 146.0 186 48.9
BraA10t44561Z Brassica rapa HOM05D006285 ORTHO05D007249 2.8e-33 146.0 186 48.9
BcaNung01167 Brassica carinata HOM05D006285 ORTHO05D007249 4.8e-33 145.2 187 48.7
Thhalv10014724m.g Eutrema salsugineum HOM05D006285 ORTHO05D007249 1.4e-32 143.7 188 51.1
AL6G23830 Arabidopsis lyrata HOM05D006285 ORTHO05D007249 1.8e-32 143.3 188 48.9
A03p05870 Brassica napus HOM05D006285 ORTHO05D007249 2.4e-32 142.9 186 47.3
BraA03t09926Z Brassica rapa HOM05D006285 ORTHO05D007249 2.4e-32 142.9 186 47.3
THA.LOC104803190 Tarenaya hassleriana HOM05D006285 ORTHO05D007249 5.3e-32 141.7 199 45.7
TAR622G0521 Trochodendron aralioides HOM05D006285 ORTHO05D007249 6.9e-32 141.4 190 45.8
Haze_12478 Corylus avellana HOM05D006285 ORTHO05D007249 9.0e-32 141.0 181 51.4
Carub.0006s1139 Capsella rubella HOM05D006285 ORTHO05D007249 1.2e-31 140.6 199 47.2
Cfa009427 Carpinus fangiana HOM05D006285 ORTHO05D007249 1.5e-31 140.2 181 50.8
Prupe.1G218500 Prunus persica HOM05D006285 ORTHO05D007249 2.0e-31 139.8 210 45.7
Aa31LG3G14440 Aethionema arabicum HOM05D006285 ORTHO05D007249 3.4e-31 139.0 181 49.2
THA.LOC104825472 Tarenaya hassleriana HOM05D006285 ORTHO05D007249 1.3e-30 137.1 199 44.2
ClCG06G001800 Citrullus lanatus HOM05D006285 ORTHO05D007249 2.2e-30 136.3 178 46.1
Manes.08G102800 Manihot esculenta HOM05D006285 ORTHO05D007249 4.9e-30 135.2 168 48.2
CiPaw.06G107800 Carya illinoinensis HOM05D006285 ORTHO05D007249 8.4e-30 134.4 188 49.5
Actinidia30601 Actinidia chinensis HOM05D006285 ORTHO05D007249 2.4e-29 132.9 178 46.1
MELO3C022348.2 Cucumis melo HOM05D006285 ORTHO05D007249 5.4e-29 131.7 187 45.5
CsaV3_6G007840 Cucumis sativus L. HOM05D006285 ORTHO05D007249 1.2e-28 130.6 179 44.1
Sed0027998 Sechium edule HOM05D006285 ORTHO05D007249 3.5e-28 129.0 176 45.5
PGSC0003DMG400006480 Solanum tuberosum HOM05D006285 ORTHO05D007249 1.0e-27 127.5 178 46.1
Actinidia22128 Actinidia chinensis HOM05D006285 ORTHO05D007249 3.0e-27 125.9 177 46.3
TAR374G0139 Trochodendron aralioides HOM05D006285 ORTHO05D007249 8.7e-27 124.4 191 44.5
MD13G1127100 Malus domestica HOM05D006285 ORTHO05D007249 5.6e-26 121.7 198 42.9
CsaV3_4G002460 Cucumis sativus L. HOM05D006285 ORTHO05D007249 7.4e-26 121.3 188 41.5
Atru.chr11.2411 Acer truncatum HOM05D006285 ORTHO05D007249 9.6e-26 120.9 181 44.8
Cpa.g.sc207.10 Carica papaya HOM05D006285 ORTHO05D007249 1.6e-25 120.2 174 44.3
Migut.K01038 Erythranthe guttata HOM05D006285 ORTHO05D007249 1.6e-25 120.2 178 44.9
TWI36G1029 Tripterygium wilfordii HOM05D006285 ORTHO05D007249 8.1e-25 117.9 170 45.9
ATR0582G164 Amborella trichopoda HOM05D006285 ORTHO05D007249 1.4e-24 117.1 197 41.6
PGR102G0288 Punica granatum HOM05D006285 ORTHO05D007249 1.8e-24 116.7 186 40.9
EL10Ac6g13588 Beta vulgaris HOM05D006285 ORTHO05D007249 5.3e-24 115.2 182 41.8
MELO3C017797.2 Cucumis melo HOM05D006285 ORTHO05D007249 2.0e-23 113.2 191 39.3
Gohir.A01G021000 Gossypium hirsutum HOM05D006285 ORTHO05D007249 2.6e-23 112.8 138 51.4
PSO017G1512 Papaver somniferum HOM05D006285 ORTHO05D007249 3.4e-23 112.5 206 41.7
Eucgr.G01954 Eucalyptus grandis HOM05D006285 ORTHO05D007249 4.5e-23 112.1 162 43.8
MD16G1127400 Malus domestica HOM05D006285 ORTHO05D007249 4.5e-23 112.1 200 40.5
PSO478G0022 Papaver somniferum HOM05D006285 ORTHO05D007249 4.5e-23 112.1 207 41.1
Lsat_1_v5_gn_3_31461 Lactuca sativa HOM05D006285 ORTHO05D007249 5.8e-23 111.7 177 44.6
CDE06G1494 Ceratophyllum demersum HOM05D006285 ORTHO05D007249 1.3e-22 110.5 179 42.5
SalBow2G0692 Salvia bowleyana HOM05D006285 ORTHO05D007249 1.3e-22 110.5 118 51.7
CARHR200230 Cardamine hirsuta HOM05D006285 ORTHO05D007249 2.2e-22 109.8 141 47.5
Oeu055473.1 Olea europaea HOM05D006285 ORTHO05D007249 4.9e-22 108.6 178 41.0
Aqoxy5G03206 Aquilegia oxysepala HOM05D006285 ORTHO05D007249 6.0e-20 101.7 175 42.3
PSO732G0051 Papaver somniferum HOM05D006285 ORTHO05D007249 1.3e-19 100.5 190 40.0
Nn3g16318 Nelumbo nucifera HOM05D006285 ORTHO05D007249 2.3e-19 99.8 167 40.1
Sc04g0010480 Simmondsia chinensis HOM05D006285 ORTHO05D007249 3.0e-19 99.4 159 43.4
ECA233G3183 Erigeron canadensis HOM05D006285 ORTHO05D007249 3.9e-19 99.0 173 39.3
PSO675G2785 Papaver somniferum HOM05D006285 ORTHO05D007249 5.1e-19 98.6 194 39.7
HanXRQChr17g0540471 Helianthus annuus HOM05D006285 ORTHO05D007249 2.5e-18 96.3 174 37.9
Sc11g0000190 Simmondsia chinensis HOM05D006285 ORTHO05D007249 4.3e-18 95.5 157 42.0
Nn4g22189 Nelumbo nucifera HOM05D006285 ORTHO05D007249 8.2e-17 91.3 140 41.4
Oeu003277.1 Olea europaea HOM05D006285 ORTHO05D007249 8.2e-17 91.3 178 37.1
HanXRQChr08g0210081 Helianthus annuus HOM05D006285 ORTHO05D007249 2.6e-15 86.3 165 39.4
MBI07_g36277_MAGBIO Magnolia biondii HOM05D006285 ORTHO05D007249 2.6e-15 86.3 179 38.5
Eucgr.B03545 Eucalyptus grandis HOM05D006285 ORTHO05D007249 1.0e-14 84.3 198 37.9
CAN.G1179.3 Capsicum annuum HOM05D006285 ORTHO05D000105 1.3e-14 84.0 113 46.9
FAN12G2625 Fragaria x ananassa HOM05D006285 ORTHO05D007249 1.3e-14 84.0 154 40.9
HanXRQChr06g0175041 Helianthus annuus HOM05D006285 ORTHO05D007249 2.9e-14 82.8 174 37.4
FvH4_4g23000 Fragaria vesca HOM05D006285 ORTHO05D007249 3.8e-14 82.4 153 39.9
Rhsim12G0019500 Rhododendron simsii HOM05D006285 ORTHO05D007249 5.0e-14 82.0 152 43.4
CDE02G4729 Ceratophyllum demersum HOM05D006285 ORTHO05D007249 1.4e-13 80.5 127 38.6
Ah.03g135710 Amaranthus hybridus HOM05D000002 ORTHO05D000047 7.2e-13 78.2 133 39.1
FAN07G2449 Fragaria x ananassa HOM05D006285 ORTHO05D007249 1.2e-12 77.4 79 55.7
ECA246G0706 Erigeron canadensis HOM05D006285 ORTHO05D007249 1.6e-12 77.0 211 32.7
FAN17G1869 Fragaria x ananassa HOM05D006285 ORTHO05D007249 2.7e-12 76.3 82 52.4
SEGI_20867 Sequoiadendron giganteum HOM05D006285 ORTHO05D007249 4.6e-12 75.5 179 34.6
RcHm_v2.0_Chr4g0429271 Rosa chinensis HOM05D006285 ORTHO05D007249 1.8e-11 73.6 153 39.2
HPP92_023090 Vanilla planifolia HOM05D006285 ORTHO05D007249 4.3e-10 68.9 181 32.6
BcaB01g05368 Brassica carinata HOM05D006285 ORTHO05D007249 7.4e-10 68.2 83 50.6
AUR62028862 Chenopodium quinoa HOM05D006285 ORTHO05D007249 1.6e-09 67.0 128 36.7
Sopen01g005240 Solanum pennellii HOM05D015436 ORTHO05D018126 1.1e-08 64.3 91 41.8
Aqoxy3G01789 Aquilegia oxysepala HOM05D006285 ORTHO05D007249 4.1e-08 62.4 86 41.9
SEGI_14779 Sequoiadendron giganteum HOM05D001047 ORTHO05D000768 1.5e-07 60.5 116 38.8
vmacro16080 Vaccinium macrocarpon HOM05D006285 ORTHO05D007249 1.5e-07 60.5 172 33.1
ECA234G1201 Erigeron canadensis HOM05D001047 ORTHO05D000768 2.0e-07 60.1 113 38.1
ClCG07G011740 Citrullus lanatus HOM05D006285 ORTHO05D007249 2.6e-07 59.7 91 42.9
HanXRQChr06g0168671 Helianthus annuus HOM05D001047 ORTHO05D000768 3.4e-07 59.3 88 42.0
Nitab4.5_0000343g0360 Nicotiana tabacum HOM05D001047 ORTHO05D000768 3.4e-07 59.3 97 44.3
ATR0006G029 Amborella trichopoda HOM05D001047 ORTHO05D000768 5.9e-07 58.5 133 34.6
Dinv20411 Davidia involucrata HOM05D001047 ORTHO05D000768 5.9e-07 58.5 161 32.9
ECA236G0223 Erigeron canadensis HOM05D001047 ORTHO05D000768 5.9e-07 58.5 87 47.1
Gohir.A05G034800 Gossypium hirsutum HOM05D001047 ORTHO05D000768 5.9e-07 58.5 104 43.3
Peaxi162Scf00533g00059 Petunia axillaris HOM05D001047 ORTHO05D000768 5.9e-07 58.5 129 38.0
SalBow5G2121 Salvia bowleyana HOM05D001047 ORTHO05D000768 5.9e-07 58.5 124 38.7
HanXRQChr04g0125901 Helianthus annuus HOM05D001047 ORTHO05D000768 1.0e-06 57.8 87 43.7
CDE04G3301 Ceratophyllum demersum HOM05D001047 ORTHO05D000768 1.3e-06 57.4 135 37.0
FAN02G1879 Fragaria x ananassa HOM05D001047 ORTHO05D000768 1.3e-06 57.4 81 43.2
Gohir.D05G036200 Gossypium hirsutum HOM05D001047 ORTHO05D000768 1.3e-06 57.4 102 41.2
Gorai.009G036800 Gossypium raimondii HOM05D001047 ORTHO05D000768 1.3e-06 57.4 102 41.2
Oeu025295.1 Olea europaea HOM05D001047 ORTHO05D000768 1.7e-06 57.0 112 38.4
Prupe.7G189200 Prunus persica HOM05D001047 ORTHO05D000768 1.7e-06 57.0 124 33.1
SEGI_13039 Sequoiadendron giganteum HOM05D012961 ORTHO05D007249 2.9e-06 56.2 211 27.5
Actinidia32203 Actinidia chinensis HOM05D001047 ORTHO05D000768 3.8e-06 55.8 115 34.8
MSTRG.10497 Avicennia marina HOM05D001047 ORTHO05D000768 3.8e-06 55.8 166 31.3
MSTRG.19445 Avicennia marina HOM05D001047 ORTHO05D000768 3.8e-06 55.8 108 39.8
CAN.G1243.4 Capsicum annuum HOM05D001047 ORTHO05D000768 3.8e-06 55.8 158 31.6
SEGI_10102 Sequoiadendron giganteum HOM05D012961 ORTHO05D007249 3.8e-06 55.8 214 24.8
Solyc12g049400.2 Solanum lycopersicum HOM05D001047 ORTHO05D000768 3.8e-06 55.8 113 36.3
PGSC0003DMG400004367 Solanum tuberosum HOM05D001047 ORTHO05D000768 3.8e-06 55.8 113 35.4
HanXRQChr10g0311841 Helianthus annuus HOM05D001047 ORTHO05D000768 5.0e-06 55.5 99 40.4
Lsat_1_v5_gn_8_85820 Lactuca sativa HOM05D001047 ORTHO05D000768 5.0e-06 55.5 84 45.2
Os04g0395800 Oryza sativa ssp. japonica HOM05D006285 ORTHO05D007249 5.0e-06 55.5 79 48.1
SEGI_25766 Sequoiadendron giganteum HOM05D012961 ORTHO05D000768 5.0e-06 55.5 215 24.7
Cc00_g01970 Coffea canephora HOM05D002924 ORTHO05D003122 6.5e-06 55.1 102 40.2
SEGI_23736 Sequoiadendron giganteum HOM05D006285 ORTHO05D007249 6.5e-06 55.1 157 31.8
Sc18g0002760 Simmondsia chinensis HOM05D001047 ORTHO05D000768 6.5e-06 55.1 94 42.6
Lsat_1_v5_gn_5_139561 Lactuca sativa HOM05D001047 ORTHO05D000768 8.5e-06 54.7 100 41.0
MD15G1434400 Malus domestica HOM05D001047 ORTHO05D000768 8.5e-06 54.7 94 40.4


User provided reference genes

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