Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044046.4 Olea europaea HOM05D004594 ORTHO05D005225 0.0e+00 1838.9 1058 100.0
Dinv02961 Davidia involucrata HOM05D004594 ORTHO05D005225 3.7e-274 948.7 1238 52.5
Migut.E00588 Erythranthe guttata HOM05D004594 ORTHO05D005225 1.2e-256 890.6 1249 52.0
GSVIVG01019950001 Vitis vinifera HOM05D004594 ORTHO05D005225 3.2e-241 839.3 1209 49.8
Actinidia11790 Actinidia chinensis HOM05D004594 ORTHO05D005225 2.3e-236 823.2 1311 47.1
Cc00_g08470 Coffea canephora HOM05D004594 ORTHO05D005225 3.2e-233 812.8 1223 47.0
Cfa008959 Carpinus fangiana HOM05D004594 ORTHO05D005225 2.8e-229 799.7 1236 47.6
QL03p068116 Quercus lobata HOM05D004594 ORTHO05D005225 3.1e-228 796.2 1254 46.9
Haze_11988 Corylus avellana HOM05D004594 ORTHO05D005225 1.5e-227 793.9 1316 46.4
Manes.01G034200 Manihot esculenta HOM05D004594 ORTHO05D005225 3.4e-227 792.7 1240 46.5
CiPaw.06G087400 Carya illinoinensis HOM05D004594 ORTHO05D005225 2.9e-226 789.6 1217 46.5
Sopen04g003850 Solanum pennellii HOM05D004594 ORTHO05D005225 1.1e-222 777.7 1244 45.8
SGA_v2.0_scaffold140G35452 Striga asiatica HOM05D004594 ORTHO05D005225 1.1e-222 777.7 1260 46.8
Duzib248G1210 Durio zibethinus HOM05D004594 ORTHO05D005225 1.9e-222 776.9 1217 47.3
Solyc04g008680.4 Solanum lycopersicum HOM05D004594 ORTHO05D005225 1.2e-219 767.7 1231 45.9
FAN07G2218 Fragaria x ananassa HOM05D004594 ORTHO05D005225 9.9e-219 764.6 1210 46.4
DCAR_013185 Daucus carota HOM05D004594 ORTHO05D005225 2.9e-218 763.1 1258 46.8
CAN.G194.5 Capsicum annuum HOM05D004594 ORTHO05D005225 8.4e-218 761.5 1230 47.4
FAN22G0563 Fragaria x ananassa HOM05D004594 ORTHO05D005225 8.4e-218 761.5 1211 45.9
FvH4_4g31060 Fragaria vesca HOM05D004594 ORTHO05D005225 1.9e-217 760.4 1214 45.9
EL10Ac3g06731 Beta vulgaris HOM05D004594 ORTHO05D005225 3.2e-217 759.6 1246 44.1
Eucgr.G02485 Eucalyptus grandis HOM05D004594 ORTHO05D005225 7.1e-217 758.4 1262 44.9
FAN17G1193 Fragaria x ananassa HOM05D004594 ORTHO05D005225 9.3e-217 758.1 1211 46.1
MD16G1069300 Malus domestica HOM05D004594 ORTHO05D005225 4.6e-216 755.7 1274 46.2
Potri.010G166100 Populus trichocarpa HOM05D004594 ORTHO05D005225 6.6e-215 751.9 1283 43.6
RcHm_v2.0_Chr4g0439441 Rosa chinensis HOM05D004594 ORTHO05D005225 3.3e-214 749.6 1228 45.8
CiPaw.05G132100 Carya illinoinensis HOM05D004594 ORTHO05D005225 4.3e-214 749.2 1086 48.9
CANSAT64G0453 Cannabis sativa HOM05D004594 ORTHO05D005225 8.1e-213 745.0 1263 45.8
TWI79G0308 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 2.4e-212 743.4 1265 44.1
Ciclev10030522m.g Citrus clementina HOM05D004594 ORTHO05D005225 1.5e-211 740.7 1056 49.3
Manes.05G104800 Manihot esculenta HOM05D004594 ORTHO05D005225 3.4e-211 739.6 1238 44.8
TWI75G1472 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 1.3e-210 737.6 1298 42.6
Hund25219 Selenicereus undatus HOM05D004594 ORTHO05D005225 6.4e-210 735.3 1235 45.1
FAN12G0764 Fragaria x ananassa HOM05D004594 ORTHO05D005225 4.2e-209 732.6 1239 44.6
TAR629G1990 Trochodendron aralioides HOM05D004594 ORTHO05D005225 7.1e-209 731.9 1231 45.4
AUR62035898 Chenopodium quinoa HOM05D004594 ORTHO05D005225 9.3e-209 731.5 1208 45.3
AUR62035342 Chenopodium quinoa HOM05D004594 ORTHO05D005225 6.0e-208 728.8 1121 48.6
ClCG09G021930 Citrullus lanatus HOM05D004594 ORTHO05D005225 2.3e-207 726.9 1318 43.6
Nitab4.5_0000129g0280 Nicotiana tabacum HOM05D004594 ORTHO05D005225 5.1e-207 725.7 1224 45.8
Thecc.02G342500 Theobroma cacao HOM05D004594 ORTHO05D005225 5.6e-206 722.2 1220 45.2
Peaxi162Scf00329g00617 Petunia axillaris HOM05D004594 ORTHO05D005225 5.3e-204 715.7 1231 44.5
ECA233G5935 Erigeron canadensis HOM05D004594 ORTHO05D005225 4.5e-203 712.6 1223 46.9
MELO3C002967.2 Cucumis melo HOM05D004594 ORTHO05D005225 1.7e-202 710.7 1314 43.2
Lj2g0016635 Lotus japonicus HOM05D004594 ORTHO05D005225 3.8e-202 709.5 1302 44.2
Rhsim09G0077000 Rhododendron simsii HOM05D004594 ORTHO05D005225 8.4e-202 708.4 1307 42.9
CsaV3_5G025180 Cucumis sativus L. HOM05D004594 ORTHO05D005225 2.5e-201 706.8 1293 42.9
Phvul.003G045700 Phaseolus vulgaris HOM05D004594 ORTHO05D005225 5.5e-201 705.7 1272 43.1
Lsat_1_v5_gn_8_32581 Lactuca sativa HOM05D004594 ORTHO05D005225 7.1e-201 705.3 1101 48.0
Sed0022637 Sechium edule HOM05D004594 ORTHO05D005225 6.0e-200 702.2 1252 44.0
Ca_04825_v3 Cicer arietinum L. HOM05D004594 ORTHO05D005225 6.3e-197 692.2 1278 43.7
Gorai.012G186600 Gossypium raimondii HOM05D004594 ORTHO05D005225 8.2e-197 691.8 1239 44.0
Gohir.D04G191200 Gossypium hirsutum HOM05D004594 ORTHO05D005225 6.9e-196 688.7 1241 44.0
VMungo1215G3128 Vigna mungo HOM05D004594 ORTHO05D005225 1.2e-195 688.0 1296 43.7
Lalb_Chr10g0098431 Lupinus albus HOM05D004594 ORTHO05D005225 2.9e-194 683.3 1306 43.2
Lsat_1_v5_gn_3_33900 Lactuca sativa HOM05D004594 ORTHO05D005225 2.7e-192 676.8 1180 45.4
Sabra10G0126400 Salix brachista HOM05D004594 ORTHO05D005225 2.7e-192 676.8 1349 41.1
TAR371G0293 Trochodendron aralioides HOM05D004594 ORTHO05D005225 7.9e-192 675.2 1207 44.3
Glyma.01G051400 Glycine max HOM05D004594 ORTHO05D005225 1.8e-191 674.1 1288 42.6
HanXRQChr08g0224741 Helianthus annuus HOM05D004594 ORTHO05D005225 1.9e-190 670.6 1221 44.6
Nitab4.5_0001419g0070 Nicotiana tabacum HOM05D004594 ORTHO05D005225 2.2e-189 667.2 1238 44.7
Psat2g116320 Pisum sativum HOM05D004594 ORTHO05D005225 3.7e-189 666.4 1268 43.1
PSO013G0146 Papaver somniferum HOM05D004594 ORTHO05D005225 8.2e-189 665.2 1234 43.3
Glyma.02G109900 Glycine max HOM05D004594 ORTHO05D005225 1.4e-188 664.5 1287 41.7
Aqoxy3G03454 Aquilegia oxysepala HOM05D004594 ORTHO05D005225 1.5e-187 661.0 1236 43.8
arahy.Tifrunner.gnm1.ann1.8R27D6 Arachis hypogaea HOM05D004594 ORTHO05D005225 3.4e-187 659.8 1316 41.3
PSO832G1080 Papaver somniferum HOM05D004594 ORTHO05D005225 4.5e-187 659.4 1227 42.5
Prupe.1G277900 Prunus persica HOM05D004594 ORTHO05D005225 2.9e-186 656.8 1237 43.6
Medtr5g042000 Medicago truncatula HOM05D004594 ORTHO05D005225 3.6e-184 649.8 1331 40.7
Nn1g04524 Nelumbo nucifera HOM05D004594 ORTHO05D005225 1.1e-182 644.8 1283 40.4
ECA246G2651 Erigeron canadensis HOM05D004594 ORTHO05D005225 2.6e-182 643.7 1299 41.2
PGR119G1944 Punica granatum HOM05D004594 ORTHO05D005225 2.8e-181 640.2 1211 42.9
Ah.13g075020 Amaranthus hybridus HOM05D004594 ORTHO05D005225 6.9e-180 635.6 1225 42.4
CDE07G1889 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 2.7e-168 597.0 1161 41.6
Sc11g0002090 Simmondsia chinensis HOM05D004594 ORTHO05D005225 3.6e-168 596.7 1035 45.2
TPR.G34709 Trifolium pratense HOM05D004594 ORTHO05D005225 6.7e-167 592.4 1103 42.9
Carub.0005s0198 Capsella rubella HOM05D004594 ORTHO05D005225 8.8e-167 592.0 1248 40.1
Cpa.g.sc25.130 Carica papaya HOM05D004594 ORTHO05D005225 9.7e-166 588.6 1218 42.5
THA.LOC104824075 Tarenaya hassleriana HOM05D004594 ORTHO05D005225 2.2e-165 587.4 1230 39.6
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea HOM05D004594 ORTHO05D005225 1.6e-163 581.3 1453 36.8
CARHR145490 Cardamine hirsuta HOM05D004594 ORTHO05D005225 7.7e-163 578.9 1252 38.7
Atru.chr11.1750 Acer truncatum HOM05D004594 ORTHO05D005225 4.8e-157 559.7 530 62.1
Sp2g14100 Schrenkiella parvula HOM05D004594 ORTHO05D005225 4.5e-155 553.1 1240 37.6
HanXRQChr14g0429131 Helianthus annuus HOM05D004594 ORTHO05D005225 6.5e-154 549.3 1153 41.5
AT2G03150 Arabidopsis thaliana HOM05D004594 ORTHO05D005225 1.1e-153 548.5 1230 38.9
AL5G12800 Arabidopsis lyrata HOM05D004594 ORTHO05D005225 2.1e-152 544.3 1243 39.1
C09p31000 Brassica napus HOM05D004594 ORTHO05D005225 5.2e-151 539.7 1199 39.4
HanXRQChr17g0540651 Helianthus annuus HOM05D004594 ORTHO05D005225 7.5e-150 535.8 1026 44.9
BcaC04g21505 Brassica carinata HOM05D004594 ORTHO05D005225 1.3e-149 535.0 1200 39.4
BcaB07g30683 Brassica carinata HOM05D004594 ORTHO05D005225 3.5e-147 526.9 1206 38.9
ATR0564G229 Amborella trichopoda HOM05D004594 ORTHO05D005225 2.9e-146 523.9 1264 39.4
A09p24110 Brassica napus HOM05D004594 ORTHO05D005225 3.8e-146 523.5 1203 38.7
BraA09t38011Z Brassica rapa HOM05D004594 ORTHO05D005225 3.8e-146 523.5 1203 38.7
BolC9t55959H Brassica oleracea HOM05D004594 ORTHO05D005225 6.1e-144 516.2 1200 38.7
HanXRQChr08g0225211 Helianthus annuus HOM05D004594 ORTHO05D005225 4.0e-143 513.5 1207 37.6
Aa31LG2G7300 Aethionema arabicum HOM05D004594 ORTHO05D005225 1.4e-135 488.4 1029 40.2
CDE04G0114 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 1.7e-133 481.5 1133 35.3
SHI24774 Sapria himalayana HOM05D004594 ORTHO05D005225 3.3e-129 467.2 954 37.2
Zm00001eb384230 Zea mays HOM05D004594 ORTHO05D005225 1.6e-128 464.9 1265 34.2
MBI06_g33529_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 6.2e-128 463.0 714 47.2
Thhalv10005550m.g Eutrema salsugineum HOM05D004594 ORTHO05D005225 3.7e-125 453.8 1254 35.6
unitig_52.g17301 Utricularia gibba HOM05D004594 ORTHO05D005225 1.5e-118 431.8 663 47.1
Zm00001eb277410 Zea mays HOM05D004594 ORTHO05D005225 4.9e-109 400.2 1226 33.4
C02p51140 Brassica napus HOM05D004594 ORTHO05D005225 8.4e-109 399.4 1149 34.5
HPP92_001998 Vanilla planifolia HOM05D004594 ORTHO05D005225 5.4e-108 396.7 1002 39.0
Gohir.1Z049516 Gossypium hirsutum HOM05D004594 ORTHO05D005225 3.2e-100 370.9 623 43.0
Oeu034639.1 Olea europaea HOM05D004594 ORTHO05D005225 1.9e-89 335.1 256 78.9
Gohir.A04G146601 Gossypium hirsutum HOM05D004594 ORTHO05D005225 2.0e-86 325.1 408 55.6
SEGI_16638 Sequoiadendron giganteum HOM05D004594 ORTHO05D005225 5.3e-79 300.4 1256 30.0
SMO172G0003 Selaginella moellendorffii HOM05D004594 ORTHO05D005225 4.5e-70 270.8 1002 30.7
AagrBONN_evm.TU.Sc2ySwM_340.1878 Anthoceros agrestis HOM05D004594 ORTHO05D005225 1.0e-66 259.6 999 30.5
Pp3c12_12730 Physcomitrium patens HOM05D004594 ORTHO05D005225 1.1e-65 256.1 922 28.0
vmacro10769 Vaccinium macrocarpon HOM05D004594 ORTHO05D005225 7.2e-60 236.9 792 33.7
Pp3c4_10880 Physcomitrium patens HOM05D004594 ORTHO05D005225 1.3e-56 226.1 911 26.1
Lj3E852T1 Lonicera japonica HOM05D004594 ORTHO05D005225 2.8e-56 224.9 267 52.4
Mapoly0102s0024 Marchantia polymorpha HOM05D004594 ORTHO05D005225 2.4e-55 221.9 1089 28.7
Atru.chr11.1748 Acer truncatum HOM05D004594 ORTHO05D005225 4.7e-51 207.6 360 47.5
CBR_g5747 Chara braunii HOM05D004594 ORTHO05D005225 2.3e-50 205.3 475 37.5
unitig_52.g17300 Utricularia gibba HOM05D004594 ORTHO05D005225 5.9e-46 190.7 409 41.3
Oeu032954.1 Olea europaea HOM05D004594 ORTHO05D005225 8.5e-45 186.8 91 94.5
Rhsim04G0150600 Rhododendron simsii HOM05D004594 ORTHO05D005225 9.5e-36 156.8 172 52.9
Lj3E852G2 Lonicera japonica HOM05D004594 ORTHO05D005225 2.2e-32 145.6 272 42.3
Lj3A852T53 Lonicera japonica HOM05D004594 ORTHO05D005225 3.7e-24 118.2 64 87.5
TPR.G11445 Trifolium pratense HOM05D004594 ORTHO05D005225 1.2e-22 113.2 62 88.7
Gohir.1Z049616 Gossypium hirsutum HOM05D004594 ORTHO05D005225 6.0e-22 110.9 274 37.2
Lsat_1_v5_gn_3_92661 Lactuca sativa HOM05D004594 ORTHO05D005225 7.8e-22 110.5 134 50.0
CBR_g5749 Chara braunii HOM05D004594 ORTHO05D005225 1.0e-21 110.2 263 38.0
BcaC03g17185 Brassica carinata HOM05D004594 ORTHO05D005225 6.6e-21 107.5 431 30.6
BolC2t11204H Brassica oleracea HOM05D004594 ORTHO05D005225 6.6e-21 107.5 637 26.5
Os06g0562700 Oryza sativa ssp. japonica HOM05D004594 ORTHO05D005225 1.5e-20 106.3 287 41.5
Lsat_1_v5_gn_4_108040 Lactuca sativa HOM05D004594 ORTHO05D005225 2.6e-17 95.5 67 65.7
Cre06.g283634 Chlamydomonas reinhardtii HOM05D004594 ORTHO05D005225 1.4e-15 89.7 227 27.3
Actinidia04099 Actinidia chinensis HOM05D004594 ORTHO05D005225 7.0e-15 87.4 211 39.3
Lsat_1_v5_gn_1_53021 Lactuca sativa HOM05D004594 ORTHO05D005225 9.2e-15 87.0 63 65.1
MBI02_g24139_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 7.8e-14 84.0 69 60.9
A02p33250 Brassica napus HOM05D004594 ORTHO05D005225 6.6e-13 80.9 75 54.7
A02p33260 Brassica napus HOM05D004594 ORTHO05D005225 8.6e-13 80.5 50 70.0
MBI05_g14664_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 1.5e-12 79.7 50 70.0
SHI24778 Sapria himalayana HOM05D004594 ORTHO05D005225 4.3e-12 78.2 50 78.0
Atru.chr11.1749 Acer truncatum HOM05D004594 ORTHO05D005225 1.1e-07 63.5 166 36.7
HPP92_001999 Vanilla planifolia HOM05D004594 ORTHO05D005225 1.9e-07 62.8 36 72.2
BraA02t08348Z Brassica rapa HOM05D004594 ORTHO05D005225 4.1e-07 61.6 40 67.5
QL03p068414 Quercus lobata HOM05D004594 ORTHO05D005225 1.6e-06 59.7 47 59.6


User provided reference genes

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