Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043649.1 Olea europaea HOM05D004222 ORTHO05D004982 6.4e-92 340.9 192 100.0
Oeu026248.1 Olea europaea HOM05D004222 ORTHO05D004982 1.9e-83 312.8 192 82.8
Solyc04g010090.3 Solanum lycopersicum HOM05D004222 ORTHO05D004982 4.9e-76 288.1 192 76.6
Sopen04g005230 Solanum pennellii HOM05D004222 ORTHO05D004982 4.9e-76 288.1 192 76.6
Nitab4.5_0003780g0070 Nicotiana tabacum HOM05D004222 ORTHO05D004982 3.2e-75 285.4 192 75.5
Nitab4.5_0006737g0050 Nicotiana tabacum HOM05D004222 ORTHO05D004982 9.3e-75 283.9 192 75.0
PGSC0003DMG400011493 Solanum tuberosum HOM05D004222 ORTHO05D004982 1.6e-74 283.1 192 75.5
GSVIVG01016750001 Vitis vinifera HOM05D004222 ORTHO05D004982 1.8e-73 279.6 194 77.3
Rhsim08G0239600 Rhododendron simsii HOM05D004222 ORTHO05D004982 2.3e-73 279.3 188 75.0
Lj9A532G68 Lonicera japonica HOM05D004222 ORTHO05D004982 3.9e-73 278.5 188 75.0
Lj9C524T6 Lonicera japonica HOM05D004222 ORTHO05D004982 3.9e-73 278.5 188 75.0
CAN.G786.39 Capsicum annuum HOM05D004222 ORTHO05D004982 1.9e-72 276.2 194 75.3
Rhsim01G0228800 Rhododendron simsii HOM05D004222 ORTHO05D004982 2.5e-72 275.8 188 75.0
Dinv37865 Davidia involucrata HOM05D004222 ORTHO05D004982 9.6e-72 273.9 189 73.0
Lsat_1_v5_gn_4_74980 Lactuca sativa HOM05D004222 ORTHO05D004982 1.6e-71 273.1 189 74.1
Dinv15742 Davidia involucrata HOM05D004222 ORTHO05D004982 2.1e-71 272.7 194 74.2
SGA_v2.0_scaffold4G02066 Striga asiatica HOM05D004222 ORTHO05D004982 2.1e-71 272.7 194 73.7
CiPaw.01G218100 Carya illinoinensis HOM05D004222 ORTHO05D004982 2.8e-71 272.3 193 74.6
vmacro16353 Vaccinium macrocarpon HOM05D004222 ORTHO05D004982 4.8e-71 271.6 188 73.4
vmacro15039 Vaccinium macrocarpon HOM05D004222 ORTHO05D004982 1.4e-70 270.0 188 73.4
MSTRG.9521 Avicennia marina HOM05D004222 ORTHO05D004982 1.8e-70 269.6 193 78.2
Haze_16054 Corylus avellana HOM05D004222 ORTHO05D004982 4.0e-70 268.5 193 72.0
CSS0031925 Camellia sinensis var. sinensis HOM05D004222 ORTHO05D004982 5.3e-70 268.1 191 73.3
TAR383G0284 Trochodendron aralioides HOM05D004222 ORTHO05D004982 5.3e-70 268.1 191 71.7
Potri.001G168300 Populus trichocarpa HOM05D004222 ORTHO05D004982 4.5e-69 265.0 193 73.1
Sabra01G0142300 Salix brachista HOM05D004222 ORTHO05D004982 4.5e-69 265.0 193 73.6
Cc02_g29210 Coffea canephora HOM05D004222 ORTHO05D004982 1.7e-68 263.1 194 71.6
Hma1.2p1_0074F.1_g038830 Hydrangea macrophylla HOM05D004222 ORTHO05D004982 3.8e-68 261.9 192 69.8
Hma1.2p1_3000F.1_g331525 Hydrangea macrophylla HOM05D004222 ORTHO05D004982 3.8e-68 261.9 192 69.8
Manes.11G019600 Manihot esculenta HOM05D004222 ORTHO05D004982 4.9e-68 261.5 194 72.2
TAR626G0656 Trochodendron aralioides HOM05D004222 ORTHO05D004982 4.9e-68 261.5 186 69.9
Actinidia21792 Actinidia chinensis HOM05D004222 ORTHO05D004982 6.5e-68 261.2 188 72.3
unitig_699.g19654 Utricularia gibba HOM05D004222 ORTHO05D004982 8.4e-68 260.8 190 70.0
ECA232G1089 Erigeron canadensis HOM05D004222 ORTHO05D004982 1.1e-67 260.4 189 72.5
Actinidia32191 Actinidia chinensis HOM05D004222 ORTHO05D004982 1.4e-67 260.0 189 74.1
FAN09G4904 Fragaria x ananassa HOM05D004222 ORTHO05D004982 4.2e-67 258.5 183 71.6
Cc04_g01280 Coffea canephora HOM05D004222 ORTHO05D004982 9.3e-67 257.3 191 70.2
Migut.I01080 Erythranthe guttata HOM05D004222 ORTHO05D004982 1.6e-66 256.5 195 69.7
FvH4_6g34870 Fragaria vesca HOM05D004222 ORTHO05D004982 1.6e-66 256.5 183 71.0
FAN14G1002 Fragaria x ananassa HOM05D004222 ORTHO05D004982 1.6e-66 256.5 183 71.0
Manes.04G145400 Manihot esculenta HOM05D004222 ORTHO05D004982 1.6e-66 256.5 194 69.6
SalBow6G3336 Salvia bowleyana HOM05D004222 ORTHO05D004982 2.1e-66 256.1 192 69.8
SGA_v2.0_scaffold68G22854 Striga asiatica HOM05D004222 ORTHO05D004982 2.1e-66 256.1 194 74.7
A08p01190 Brassica napus HOM05D004222 ORTHO05D004982 3.5e-66 255.4 193 70.5
BraA08t32170Z Brassica rapa HOM05D004222 ORTHO05D004982 3.5e-66 255.4 193 70.5
Cfa003517 Carpinus fangiana HOM05D004222 ORTHO05D004982 3.5e-66 255.4 181 71.8
CiPaw.02G135300 Carya illinoinensis HOM05D004222 ORTHO05D004982 4.6e-66 255.0 193 70.5
COL.COLO4_30749 Corchorus olitorius HOM05D004222 ORTHO05D004982 6.0e-66 254.6 193 68.9
SalBow6G2027 Salvia bowleyana HOM05D004222 ORTHO05D004982 6.0e-66 254.6 192 69.3
BcaC01g01437 Brassica carinata HOM05D004222 ORTHO05D004982 7.9e-66 254.2 193 69.9
C03p92020 Brassica napus HOM05D004222 ORTHO05D004982 7.9e-66 254.2 193 69.9
Sc16g0009040 Simmondsia chinensis HOM05D004222 ORTHO05D004982 7.9e-66 254.2 189 69.3
Duzib235G1272 Durio zibethinus HOM05D004222 ORTHO05D004982 1.0e-65 253.8 186 69.9
FAN02G1508 Fragaria x ananassa HOM05D004222 ORTHO05D004982 1.0e-65 253.8 183 70.5
Gorai.011G059100 Gossypium raimondii HOM05D004222 ORTHO05D004982 1.0e-65 253.8 186 70.4
Sp1g40590 Schrenkiella parvula HOM05D004222 ORTHO05D004982 1.0e-65 253.8 193 69.4
BolC3t21520H Brassica oleracea HOM05D004222 ORTHO05D004982 1.3e-65 253.4 193 69.9
ECA232G2519 Erigeron canadensis HOM05D004222 ORTHO05D004982 1.3e-65 253.4 189 70.9
Thhalv10012402m.g Eutrema salsugineum HOM05D004222 ORTHO05D004982 2.3e-65 252.7 193 72.5
AUR62006751 Chenopodium quinoa HOM05D004222 ORTHO05D004982 3.0e-65 252.3 193 66.8
Gohir.A10G053600 Gossypium hirsutum HOM05D004222 ORTHO05D004982 5.1e-65 251.5 186 69.9
Gohir.D10G055400 Gossypium hirsutum HOM05D004222 ORTHO05D004982 8.7e-65 250.8 186 69.9
QL05p004213 Quercus lobata HOM05D004222 ORTHO05D004982 1.1e-64 250.4 192 68.8
BcaB04g17022 Brassica carinata HOM05D004222 ORTHO05D004982 1.5e-64 250.0 189 69.3
Peaxi162Scf00528g00226 Petunia axillaris HOM05D004222 ORTHO05D004982 1.5e-64 250.0 180 81.7
Thecc.06G121100 Theobroma cacao HOM05D004222 ORTHO05D004982 1.5e-64 250.0 192 68.2
Atru.chr1.3997 Acer truncatum HOM05D004222 ORTHO05D004982 1.9e-64 249.6 193 69.4
Prupe.3G039800 Prunus persica HOM05D004222 ORTHO05D004982 1.9e-64 249.6 189 76.2
RcHm_v2.0_Chr2g0145741 Rosa chinensis HOM05D004222 ORTHO05D004982 2.5e-64 249.2 190 67.9
AUR62000395 Chenopodium quinoa HOM05D004222 ORTHO05D004982 3.3e-64 248.8 193 65.8
Ciclev10026608m.g Citrus clementina HOM05D004222 ORTHO05D004982 5.7e-64 248.1 193 68.4
DCAR_002631 Daucus carota HOM05D004222 ORTHO05D004982 9.7e-64 247.3 188 67.6
THA.LOC104810368 Tarenaya hassleriana HOM05D004222 ORTHO05D004982 9.7e-64 247.3 189 76.2
SalBow6G6030 Salvia bowleyana HOM05D004222 ORTHO05D004982 2.2e-63 246.1 189 68.3
MD09G1181700 Malus domestica HOM05D004222 ORTHO05D004982 2.8e-63 245.7 183 73.2
DCAR_023344 Daucus carota HOM05D004222 ORTHO05D004982 4.8e-63 245.0 187 66.3
EL10Ac4g09456 Beta vulgaris HOM05D004222 ORTHO05D004982 6.3e-63 244.6 192 66.7
MELO3C024352.2 Cucumis melo HOM05D004222 ORTHO05D004982 6.3e-63 244.6 188 67.6
PSO135G0791 Papaver somniferum HOM05D004222 ORTHO05D004982 6.3e-63 244.6 189 65.6
AL1G62860 Arabidopsis lyrata HOM05D004222 ORTHO05D004982 8.2e-63 244.2 193 75.6
AT1G54140 Arabidopsis thaliana HOM05D004222 ORTHO05D004982 1.4e-62 243.4 193 75.6
ClCG09G000990 Citrullus lanatus HOM05D004222 ORTHO05D004982 1.4e-62 243.4 187 67.4
Sed0002362 Sechium edule HOM05D004222 ORTHO05D004982 1.8e-62 243.0 187 67.4
Ciclev10032895m.g Citrus clementina HOM05D004222 ORTHO05D004982 3.1e-62 242.3 185 66.5
Eucgr.G03389 Eucalyptus grandis HOM05D004222 ORTHO05D004982 9.0e-62 240.7 187 64.7
PSO724G0032 Papaver somniferum HOM05D004222 ORTHO05D004982 9.0e-62 240.7 188 64.4
CARHR044490 Cardamine hirsuta HOM05D004222 ORTHO05D004982 2.6e-61 239.2 192 75.0
AL1G63010 Arabidopsis lyrata HOM05D004222 ORTHO05D004982 4.5e-61 238.4 193 75.1
CsaV3_7G034430 Cucumis sativus L. HOM05D004222 ORTHO05D004982 4.5e-61 238.4 188 66.5
Glyma.07G236200 Glycine max HOM05D004222 ORTHO05D004982 5.9e-61 238.0 187 66.3
Lalb_Chr13g0298711 Lupinus albus HOM05D004222 ORTHO05D004982 5.9e-61 238.0 189 66.7
Carub.0001s4338 Capsella rubella HOM05D004222 ORTHO05D004982 1.0e-60 237.3 190 75.3
PGR031G1684 Punica granatum HOM05D004222 ORTHO05D004982 1.0e-60 237.3 190 66.8
Eucgr.H02488 Eucalyptus grandis HOM05D004222 ORTHO05D004982 1.7e-60 236.5 187 64.2
ATR0598G103 Amborella trichopoda HOM05D004222 ORTHO05D004982 2.2e-60 236.1 188 62.8
Nn2g10347 Nelumbo nucifera HOM05D004222 ORTHO05D004982 2.2e-60 236.1 180 68.9
Glyma.17G037200 Glycine max HOM05D004222 ORTHO05D004982 3.8e-60 235.3 182 67.6
TWI75G1350 Tripterygium wilfordii HOM05D004222 ORTHO05D004982 6.5e-60 234.6 192 65.1
CANSAT64G2454 Cannabis sativa HOM05D004222 ORTHO05D004982 1.9e-59 233.0 139 82.0
CDE08G1040 Ceratophyllum demersum HOM05D004222 ORTHO05D004982 2.5e-59 232.6 192 63.0
BcaC08g44165 Brassica carinata HOM05D004222 ORTHO05D004982 3.2e-59 232.3 193 66.8
TWI31G0208 Tripterygium wilfordii HOM05D004222 ORTHO05D004982 3.2e-59 232.3 147 78.2
Glyma.02G277500 Glycine max HOM05D004222 ORTHO05D004982 5.5e-59 231.5 188 63.8
Lj4g0027352 Lotus japonicus HOM05D004222 ORTHO05D004982 5.5e-59 231.5 187 63.6
BcaB02g10859 Brassica carinata HOM05D004222 ORTHO05D004982 1.6e-58 229.9 188 65.4
Phvul.003G118200 Phaseolus vulgaris HOM05D004222 ORTHO05D004982 1.6e-58 229.9 181 64.6
arahy.Tifrunner.gnm1.ann1.J7IGQN Arachis hypogaea HOM05D004222 ORTHO05D004982 3.6e-58 228.8 196 62.2
arahy.Tifrunner.gnm1.ann1.M5IJ04 Arachis hypogaea HOM05D004222 ORTHO05D004982 3.6e-58 228.8 196 62.2
C06p15670 Brassica napus HOM05D004222 ORTHO05D004982 3.6e-58 228.8 147 79.6
Ca_21404_v3 Cicer arietinum L. HOM05D004222 ORTHO05D004982 3.6e-58 228.8 136 80.1
Ca_21419_v3 Cicer arietinum L. HOM05D004222 ORTHO05D004982 3.6e-58 228.8 136 80.1
Medtr4g123000 Medicago truncatula HOM05D004222 ORTHO05D004982 6.1e-58 228.0 187 63.1
Medtr3g015130 Medicago truncatula HOM05D004222 ORTHO05D004982 7.9e-58 227.6 187 63.1
Aqoxy5G01362 Aquilegia oxysepala HOM05D004222 ORTHO05D004982 1.8e-57 226.5 127 84.3
BolC6t36754H Brassica oleracea HOM05D004222 ORTHO05D004982 1.8e-57 226.5 193 65.8
Ah.04g158670 Amaranthus hybridus HOM05D004222 ORTHO05D004982 2.3e-57 226.1 188 63.3
VMungo0647G2371 Vigna mungo HOM05D004222 ORTHO05D004982 1.5e-56 223.4 187 62.0
HanXRQChr09g0262591 Helianthus annuus HOM05D004222 ORTHO05D004982 2.5e-56 222.6 171 73.7
Psat0s1953g0320 Pisum sativum HOM05D004222 ORTHO05D004982 4.3e-56 221.9 189 60.8
Phvul.008G203400 Phaseolus vulgaris HOM05D004222 ORTHO05D004982 9.7e-56 220.7 187 62.6
PGR042G1688 Punica granatum HOM05D004222 ORTHO05D004982 3.7e-55 218.8 145 72.4
Ah.06g195960 Amaranthus hybridus HOM05D004222 ORTHO05D004982 6.3e-55 218.0 188 59.6
SEGI_03819 Sequoiadendron giganteum HOM05D004222 ORTHO05D004982 1.4e-54 216.9 188 60.1
HPP92_016607 Vanilla planifolia HOM05D004222 ORTHO05D004982 4.1e-54 215.3 202 58.9
Dinv10670 Davidia involucrata HOM05D004222 ORTHO05D004982 5.3e-54 214.9 133 83.5
MBI05_g15473_MAGBIO Magnolia biondii HOM05D004222 ORTHO05D004982 1.5e-53 213.4 194 69.6
Aa31LG10G1270 Aethionema arabicum HOM05D004222 ORTHO05D004982 2.0e-53 213.0 140 77.1
TPR.G18581 Trifolium pratense HOM05D004222 ORTHO05D004982 2.2e-52 209.5 145 72.4
VMungo1215G2100 Vigna mungo HOM05D004222 ORTHO05D004982 4.7e-50 201.8 256 46.5
SHI11210 Sapria himalayana HOM05D004222 ORTHO05D004982 2.3e-49 199.5 141 68.1
Os03g0408500 Oryza sativa ssp. japonica HOM05D004222 ORTHO05D004982 6.7e-49 198.0 183 60.7
Atru.chr1.2991 Acer truncatum HOM05D004222 ORTHO05D004982 2.6e-48 196.1 118 79.7
Mapoly0152s0015 Marchantia polymorpha HOM05D004222 ORTHO05D004982 2.0e-45 186.4 188 55.3
Zm00001eb392970 Zea mays HOM05D004222 ORTHO05D004982 2.6e-45 186.0 195 63.1
Zm00001eb019630 Zea mays HOM05D004222 ORTHO05D004982 4.5e-45 185.3 193 55.4
SMO340G0157 Selaginella moellendorffii HOM05D004222 ORTHO05D004982 1.4e-43 180.3 143 60.8
Pp3c19_19770 Physcomitrium patens HOM05D004222 ORTHO05D004982 1.9e-43 179.9 149 61.7
CBR_g52315 Chara braunii HOM05D004222 ORTHO05D004982 3.6e-42 175.6 143 60.8
AagrBONN_evm.TU.Sc2ySwM_117.372 Anthoceros agrestis HOM05D004222 ORTHO05D004982 2.3e-41 172.9 131 64.1
AUR62029931 Chenopodium quinoa HOM05D004222 ORTHO05D004982 7.2e-35 151.4 90 80.0
HanXRQChr14g0440851 Helianthus annuus HOM05D004222 ORTHO05D004982 4.7e-34 148.7 188 44.1
AUR62043147 Chenopodium quinoa HOM05D004222 ORTHO05D004982 1.2e-32 144.1 83 79.5
AUR62033567 Chenopodium quinoa HOM05D004222 ORTHO05D004982 1.5e-32 143.7 87 79.3
Cc02_g29240 Coffea canephora HOM05D004222 ORTHO05D004982 2.0e-32 143.3 130 61.5
Ah.06g188160 Amaranthus hybridus HOM05D000059 ORTHO05D004982 4.8e-31 138.7 144 52.8
Eucgr.J01267 Eucalyptus grandis HOM05D004222 ORTHO05D004982 8.2e-31 137.9 144 52.1
TPR.G12685 Trifolium pratense HOM05D004222 ORTHO05D004982 1.4e-30 137.1 85 77.6
C06p09920 Brassica napus HOM05D004222 ORTHO05D004982 7.0e-30 134.8 120 63.3
Thhalv10029376m.g Eutrema salsugineum HOM05D004222 ORTHO05D004982 9.1e-30 134.4 104 71.2
Duzib160G0511 Durio zibethinus HOM05D004222 ORTHO05D004982 1.0e-28 131.0 113 61.1
PRCOL_00004328 Prasinoderma coloniale HOM05D004222 ORTHO05D004982 1.4e-22 110.5 127 47.2
BcaC08g43594 Brassica carinata HOM05D004222 ORTHO05D004982 1.8e-22 110.2 82 70.7
BolC6t36064H Brassica oleracea HOM05D004222 ORTHO05D004982 1.8e-22 110.2 82 70.7
Cre07.g353350 Chlamydomonas reinhardtii HOM05D004222 ORTHO05D004982 4.5e-21 105.5 118 43.2
Haze_26828 Corylus avellana HOM05D000371 ORTHO05D004982 6.6e-20 101.7 105 46.7
Os07g0612500 Oryza sativa ssp. japonica HOM05D004222 ORTHO05D004982 8.0e-18 94.7 145 38.6
TPR.G10895 Trifolium pratense HOM05D004222 ORTHO05D004982 8.0e-18 94.7 99 53.5
FAN05G5041 Fragaria x ananassa HOM05D004222 ORTHO05D004982 1.8e-17 93.6 98 53.1
unitig_52.g17107 Utricularia gibba HOM05D004222 ORTHO05D004982 1.2e-13 80.9 84 53.6
AUR62034601 Chenopodium quinoa HOM05D004222 ORTHO05D004982 1.6e-13 80.5 47 80.9
Medtr6g027990 Medicago truncatula HOM05D004222 ORTHO05D004982 8.6e-12 74.7 65 61.5
Nitab4.5_0018373g0020 Nicotiana tabacum HOM05D000428 ORTHO05D000582 5.6e-11 72.0 87 49.4
MCO04G196 Micromonas commoda HOM05D004222 ORTHO05D004982 1.0e-09 67.8 89 37.1
CARHR038570 Cardamine hirsuta HOM05D004222 ORTHO05D004982 1.4e-09 67.4 70 58.6
ECA238G1237 Erigeron canadensis HOM05D004222 ORTHO05D004982 2.2e-07 60.1 139 35.3


User provided reference genes

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