Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043603.1 Olea europaea HOM05D005319 ORTHO05D006632 4.4e-278 960.7 498 100.0
MSTRG.16462 Avicennia marina HOM05D005319 ORTHO05D006632 4.6e-126 455.7 478 55.0
Hma1.2p1_0052F.1_g030050 Hydrangea macrophylla HOM05D005319 ORTHO05D006632 1.3e-107 394.4 479 50.7
CSS0036760 Camellia sinensis var. sinensis HOM05D005319 ORTHO05D006632 8.2e-107 391.7 483 49.1
Peaxi162Scf00011g02012 Petunia axillaris HOM05D005319 ORTHO05D006632 4.1e-106 389.4 480 50.8
Nitab4.5_0003247g0020 Nicotiana tabacum HOM05D005319 ORTHO05D006632 6.5e-104 382.1 479 49.1
CAN.G855.58 Capsicum annuum HOM05D005319 ORTHO05D006632 1.9e-103 380.6 480 50.2
PGSC0003DMG400020717 Solanum tuberosum HOM05D005319 ORTHO05D006632 2.1e-102 377.1 478 49.6
Solyc01g102970.3 Solanum lycopersicum HOM05D005319 ORTHO05D006632 6.1e-102 375.6 478 48.7
Cc02_g23690 Coffea canephora HOM05D005319 ORTHO05D006632 2.3e-101 373.6 476 48.5
Sopen01g045380 Solanum pennellii HOM05D005319 ORTHO05D006632 5.2e-101 372.5 478 48.3
Lj5A285G49 Lonicera japonica HOM05D005319 ORTHO05D006632 1.5e-100 370.9 534 46.3
QL02p103594 Quercus lobata HOM05D005319 ORTHO05D006632 1.7e-99 367.5 479 47.8
vmacro19823 Vaccinium macrocarpon HOM05D005319 ORTHO05D006632 2.2e-99 367.1 506 46.6
Actinidia26200 Actinidia chinensis HOM05D005319 ORTHO05D006632 2.8e-99 366.7 485 47.2
Atru.chr6.211 Acer truncatum HOM05D005319 ORTHO05D006632 3.7e-99 366.3 479 47.2
CSS0030211 Camellia sinensis var. sinensis HOM05D005319 ORTHO05D006632 1.4e-98 364.4 476 47.9
Thecc.06G020300 Theobroma cacao HOM05D005319 ORTHO05D006632 7.7e-97 358.6 478 46.7
unitig_8.g2963 Utricularia gibba HOM05D005319 ORTHO05D006632 7.7e-97 358.6 478 48.1
Nitab4.5_0005164g0040 Nicotiana tabacum HOM05D005319 ORTHO05D006632 3.2e-95 353.2 479 47.0
Gorai.009G114100 Gossypium raimondii HOM05D005319 ORTHO05D006632 7.2e-95 352.1 478 46.0
Gohir.A05G109700 Gossypium hirsutum HOM05D005319 ORTHO05D006632 3.6e-94 349.7 478 45.8
Prupe.1G586100 Prunus persica HOM05D005319 ORTHO05D006632 3.6e-94 349.7 479 48.0
GSVIVG01023136001 Vitis vinifera HOM05D005319 ORTHO05D006632 8.0e-94 348.6 479 48.4
Ciclev10000238m.g Citrus clementina HOM05D005319 ORTHO05D006632 1.8e-93 347.4 479 45.5
Gohir.D05G110000 Gossypium hirsutum HOM05D005319 ORTHO05D006632 3.0e-93 346.7 478 45.4
MD08G1248800 Malus domestica HOM05D005319 ORTHO05D006632 6.8e-93 345.5 479 45.9
Manes.07G031200 Manihot esculenta HOM05D005319 ORTHO05D006632 6.8e-93 345.5 478 44.4
Rhsim05G0118000 Rhododendron simsii HOM05D005319 ORTHO05D006632 1.2e-92 344.7 486 44.4
Cfa004432 Carpinus fangiana HOM05D005319 ORTHO05D006632 1.5e-92 344.4 478 46.7
TAR628G0438 Trochodendron aralioides HOM05D005319 ORTHO05D006632 2.0e-92 344.0 484 45.2
Gohir.D10G083500 Gossypium hirsutum HOM05D005319 ORTHO05D006632 3.7e-91 339.7 480 45.4
MD15G1443600 Malus domestica HOM05D005319 ORTHO05D006632 4.8e-91 339.3 479 44.9
Gorai.011G090800 Gossypium raimondii HOM05D005319 ORTHO05D006632 7.0e-90 335.5 479 45.1
Medtr8g015930 Medicago truncatula HOM05D005319 ORTHO05D006632 7.0e-90 335.5 484 45.0
Duzib192G0868 Durio zibethinus HOM05D005319 ORTHO05D006632 1.2e-89 334.7 497 44.7
PGR142G1786 Punica granatum HOM05D005319 ORTHO05D006632 3.5e-89 333.2 481 45.1
Psat1g223960 Pisum sativum HOM05D005319 ORTHO05D006632 4.5e-89 332.8 482 44.6
RcHm_v2.0_Chr7g0219031 Rosa chinensis HOM05D005319 ORTHO05D006632 7.7e-89 332.0 478 46.0
FvH4_5g27610 Fragaria vesca HOM05D005319 ORTHO05D006632 5.0e-88 329.3 478 45.6
TWI59G0928 Tripterygium wilfordii HOM05D005319 ORTHO05D006632 1.1e-87 328.2 478 43.5
arahy.Tifrunner.gnm1.ann1.2TW5YI Arachis hypogaea HOM05D005319 ORTHO05D006632 4.2e-87 326.2 477 43.4
Glyma.16G000500 Glycine max HOM05D005319 ORTHO05D006632 1.2e-86 324.7 478 43.9
Phvul.006G221600 Phaseolus vulgaris HOM05D005319 ORTHO05D006632 1.6e-86 324.3 478 43.7
SGA_v2.0_scaffold254G45232 Striga asiatica HOM05D005319 ORTHO05D006632 1.6e-86 324.3 449 45.2
Gohir.A10G157900 Gossypium hirsutum HOM05D005319 ORTHO05D006632 2.7e-86 323.6 480 44.2
Lalb_Chr18g0061161 Lupinus albus HOM05D005319 ORTHO05D006632 4.7e-86 322.8 478 43.9
Haze_09972 Corylus avellana HOM05D005319 ORTHO05D006632 2.3e-85 320.5 475 45.3
CsaV3_5G027480 Cucumis sativus L. HOM05D005319 ORTHO05D006632 2.3e-85 320.5 479 44.3
Potri.004G229732 Populus trichocarpa HOM05D005319 ORTHO05D006632 2.3e-85 320.5 480 44.4
VMungo1127G0564 Vigna mungo HOM05D005319 ORTHO05D006632 3.0e-85 320.1 481 44.1
MELO3C022920.2 Cucumis melo HOM05D005319 ORTHO05D006632 6.8e-85 318.9 479 44.1
Glyma.12G164200 Glycine max HOM05D005319 ORTHO05D006632 1.2e-84 318.2 478 43.1
Lj5g0014697 Lotus japonicus HOM05D005319 ORTHO05D006632 1.2e-84 318.2 477 43.0
THA.LOC104806623 Tarenaya hassleriana HOM05D005319 ORTHO05D006632 1.2e-84 318.2 478 42.9
CANSAT01G0698 Cannabis sativa HOM05D005319 ORTHO05D006632 1.5e-84 317.8 480 44.8
Sed0027556 Sechium edule HOM05D005319 ORTHO05D006632 1.7e-83 314.3 478 43.5
BcaNung01135 Brassica carinata HOM05D005319 ORTHO05D006632 4.9e-83 312.8 480 41.7
CDE07G1780 Ceratophyllum demersum HOM05D005319 ORTHO05D006632 4.9e-83 312.8 479 43.8
COL.COLO4_31114 Corchorus olitorius HOM05D005319 ORTHO05D006632 1.4e-82 311.2 475 42.9
ECA240G4281 Erigeron canadensis HOM05D005319 ORTHO05D006632 1.4e-82 311.2 478 42.7
C01p19580 Brassica napus HOM05D005319 ORTHO05D006632 3.1e-82 310.1 479 40.1
BolC1t01883H Brassica oleracea HOM05D005319 ORTHO05D006632 3.1e-82 310.1 480 40.8
Thhalv10024416m.g Eutrema salsugineum HOM05D005319 ORTHO05D006632 4.1e-82 309.7 478 41.6
TPR.G5958 Trifolium pratense HOM05D005319 ORTHO05D006632 4.1e-82 309.7 485 43.7
BcaC09g50887 Brassica carinata HOM05D005319 ORTHO05D006632 2.7e-81 307.0 479 40.3
BraA01t01501Z Brassica rapa HOM05D005319 ORTHO05D006632 4.5e-81 306.2 478 40.6
Sc12g0006940 Simmondsia chinensis HOM05D005319 ORTHO05D006632 7.7e-81 305.4 479 42.2
MBI03_g34263_MAGBIO Magnolia biondii HOM05D005319 ORTHO05D006632 2.9e-80 303.5 494 41.9
A01p15600 Brassica napus HOM05D005319 ORTHO05D006632 3.8e-80 303.1 480 40.6
HanXRQChr03g0090101 Helianthus annuus HOM05D005319 ORTHO05D006632 3.8e-80 303.1 480 43.5
Aqoxy6G00019 Aquilegia oxysepala HOM05D005319 ORTHO05D006632 8.6e-80 302.0 486 42.2
PSO017G2844 Papaver somniferum HOM05D005319 ORTHO05D006632 1.2e-78 298.1 485 42.7
PSO170G3892 Papaver somniferum HOM05D005319 ORTHO05D006632 1.6e-78 297.7 485 42.5
Aa31LG7G10320 Aethionema arabicum HOM05D005319 ORTHO05D006632 3.6e-78 296.6 478 41.0
Nn4g24765 Nelumbo nucifera HOM05D005319 ORTHO05D006632 3.6e-78 296.6 487 43.5
Sp7g22260 Schrenkiella parvula HOM05D005319 ORTHO05D006632 4.7e-78 296.2 478 40.0
HPP92_001202 Vanilla planifolia HOM05D005319 ORTHO05D006632 5.2e-77 292.7 480 41.5
FAN13G2205 Fragaria x ananassa HOM05D005319 ORTHO05D006632 2.0e-76 290.8 485 42.3
Carub.0007s1678 Capsella rubella HOM05D005319 ORTHO05D006632 2.6e-76 290.4 479 39.2
ECA247G0718 Erigeron canadensis HOM05D005319 ORTHO05D006632 2.2e-75 287.3 479 41.3
CARHR231700 Cardamine hirsuta HOM05D005319 ORTHO05D006632 2.9e-75 287.0 478 38.9
FAN18G0588 Fragaria x ananassa HOM05D005319 ORTHO05D006632 3.7e-75 286.6 485 42.3
Nn5g27146 Nelumbo nucifera HOM05D005319 ORTHO05D006632 4.9e-75 286.2 487 42.1
ClCG11G000090 Citrullus lanatus HOM05D005319 ORTHO05D006632 2.4e-74 283.9 473 43.1
AT4G24270 Arabidopsis thaliana HOM05D005319 ORTHO05D006632 4.6e-73 279.6 478 39.5
AL7G28980 Arabidopsis lyrata HOM05D005319 ORTHO05D006632 3.0e-72 276.9 479 38.4
Lsat_1_v5_gn_9_125320 Lactuca sativa HOM05D005319 ORTHO05D006632 3.9e-72 276.6 476 41.2
Os08g0113200 Oryza sativa ssp. japonica HOM05D005319 ORTHO05D006632 4.0e-69 266.5 482 38.2
Prupe.2G119000 Prunus persica HOM05D005319 ORTHO05D006632 1.7e-67 261.2 479 40.9
CDE04G1013 Ceratophyllum demersum HOM05D005319 ORTHO05D006632 3.7e-67 260.0 410 41.5
AUR62042963 Chenopodium quinoa HOM05D005319 ORTHO05D006632 1.2e-65 255.0 482 39.0
EL10As26g24244 Beta vulgaris HOM05D005319 ORTHO05D006632 1.6e-65 254.6 478 40.0
AUR62041124 Chenopodium quinoa HOM05D005319 ORTHO05D006632 8.6e-64 248.8 482 39.6
FAN04G2290 Fragaria x ananassa HOM05D005319 ORTHO05D006632 1.5e-63 248.1 475 40.4
Zm00001eb260720 Zea mays HOM05D005319 ORTHO05D006632 6.2e-62 242.7 479 37.2
Sabra01G0174900 Salix brachista HOM05D005319 ORTHO05D006632 1.8e-61 241.1 445 37.8
Eucgr.I02798 Eucalyptus grandis HOM05D005319 ORTHO05D006632 1.5e-60 238.0 329 45.3
Ca_00016_v3 Cicer arietinum L. HOM05D005319 ORTHO05D006632 2.9e-59 233.8 393 40.7
Pp3c2_22040 Physcomitrium patens HOM05D005319 ORTHO05D006632 2.4e-58 230.7 479 37.4
Migut.B00712 Erythranthe guttata HOM05D005319 ORTHO05D006632 6.0e-57 226.1 152 73.0
Cpa.g.sc173.4 Carica papaya HOM05D005319 ORTHO05D006632 4.3e-55 219.9 478 34.9
DCAR_003273 Daucus carota HOM05D005319 ORTHO05D006632 4.0e-53 213.4 415 38.1
Dinv29683 Davidia involucrata HOM05D005319 ORTHO05D006632 4.0e-53 213.4 130 75.4
AagrBONN_evm.TU.Sc2ySwM_228.2043 Anthoceros agrestis HOM05D005319 ORTHO05D006632 3.9e-48 196.8 480 31.9
Mapoly0013s0201 Marchantia polymorpha HOM05D005319 ORTHO05D006632 5.1e-48 196.4 478 34.5
SHI04989 Sapria himalayana HOM05D005319 ORTHO05D006632 1.2e-41 175.3 236 43.2
CiPaw.05G159200 Carya illinoinensis HOM05D005319 ORTHO05D006632 6.6e-40 169.5 196 56.1
Hund15346 Selenicereus undatus HOM05D005319 ORTHO05D006632 1.3e-38 165.2 452 33.4
SMO367G0583 Selaginella moellendorffii HOM05D005319 ORTHO05D006632 1.6e-38 164.9 388 30.7
ATR1089G095 Amborella trichopoda HOM05D005319 ORTHO05D006632 7.6e-36 156.0 198 44.9
CBR_g44339 Chara braunii HOM05D005319 ORTHO05D006632 8.7e-32 142.5 471 29.7
CiPaw.05G159300 Carya illinoinensis HOM05D005319 ORTHO05D006632 4.5e-28 130.2 71 83.1
Ciclev10004084m.g Citrus clementina HOM05D005319 ORTHO05D006632 5.6e-23 113.2 71 70.4
Lj1A1166G73 Lonicera japonica HOM05D005319 ORTHO05D006632 3.8e-19 100.5 139 48.9
SHI04990 Sapria himalayana HOM05D005319 ORTHO05D006632 2.7e-17 94.4 160 42.5
Cre12.g546700 Chlamydomonas reinhardtii HOM05D005319 ORTHO05D006632 6.7e-16 89.7 101 44.6
Oeu016642.3 Olea europaea HOM05D001586 ORTHO05D001543 3.3e-15 87.4 67 67.2
C01p22550 Brassica napus HOM05D005319 ORTHO05D006632 1.4e-10 72.0 122 39.3
BolC1t02188H Brassica oleracea HOM05D005319 ORTHO05D006632 1.4e-10 72.0 122 39.3
Lj6A128G22 Lonicera japonica HOM05D005319 ORTHO05D006632 1.9e-10 71.6 172 36.0
FvH4_5g37876 Fragaria vesca HOM05D003496 ORTHO05D003909 6.1e-09 66.6 48 75.0
FAN08G2337 Fragaria x ananassa HOM05D003496 ORTHO05D003909 1.8e-08 65.1 40 77.5
Actinidia01642 Actinidia chinensis HOM05D005319 ORTHO05D006632 3.0e-08 64.3 36 77.8
EL10Ac6g13976 Beta vulgaris HOM05D005319 ORTHO05D006632 6.7e-08 63.2 81 51.9
EL10Ac9g22556 Beta vulgaris HOM05D005319 ORTHO05D006632 1.5e-07 62.0 53 64.2
THA.LOC104820414 Tarenaya hassleriana HOM05D002658 ORTHO05D003000 5.7e-07 60.1 120 35.8
Cfa024121 Carpinus fangiana HOM05D000285 ORTHO05D001253 1.6e-06 58.5 116 34.5
C01p19550 Brassica napus HOM05D005319 ORTHO05D006632 2.2e-06 58.2 129 38.0
Cre17.g733208 Chlamydomonas reinhardtii HOM05D002097 ORTHO05D002248 2.2e-06 58.2 98 39.8
BcaNung06598 Brassica carinata HOM05D005319 ORTHO05D010222 4.8e-06 57.0 66 43.9


User provided reference genes

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