Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043602.1 Olea europaea HOM05D005319 ORTHO05D006632 1.2e-292 1009.2 558 100.0
MSTRG.16462 Avicennia marina HOM05D005319 ORTHO05D006632 7.0e-131 471.9 478 58.8
SGA_v2.0_scaffold254G45232 Striga asiatica HOM05D005319 ORTHO05D006632 3.5e-130 469.5 466 59.2
Migut.B00712 Erythranthe guttata HOM05D005319 ORTHO05D006632 6.6e-129 465.3 480 61.9
Hma1.2p1_0052F.1_g030050 Hydrangea macrophylla HOM05D005319 ORTHO05D006632 1.4e-123 447.6 423 55.3
CAN.G855.58 Capsicum annuum HOM05D005319 ORTHO05D006632 2.4e-123 446.8 483 58.2
Nitab4.5_0005164g0040 Nicotiana tabacum HOM05D005319 ORTHO05D006632 4.1e-123 446.0 484 57.9
Cc02_g23690 Coffea canephora HOM05D005319 ORTHO05D006632 5.4e-123 445.7 477 61.2
CSS0030211 Camellia sinensis var. sinensis HOM05D005319 ORTHO05D006632 1.3e-121 441.0 423 54.8
CSS0036760 Camellia sinensis var. sinensis HOM05D005319 ORTHO05D006632 1.3e-121 441.0 423 54.8
Sopen01g045380 Solanum pennellii HOM05D005319 ORTHO05D006632 1.1e-120 438.0 486 57.2
Solyc01g102970.3 Solanum lycopersicum HOM05D005319 ORTHO05D006632 1.5e-120 437.6 486 57.4
Manes.07G031200 Manihot esculenta HOM05D005319 ORTHO05D006632 1.2e-119 434.5 454 50.9
Actinidia26200 Actinidia chinensis HOM05D005319 ORTHO05D006632 2.1e-119 433.7 476 56.7
Nitab4.5_0003247g0020 Nicotiana tabacum HOM05D005319 ORTHO05D006632 2.1e-119 433.7 484 56.2
Rhsim05G0118000 Rhododendron simsii HOM05D005319 ORTHO05D006632 1.0e-118 431.4 423 53.7
TAR628G0438 Trochodendron aralioides HOM05D005319 ORTHO05D006632 1.0e-118 431.4 420 54.0
vmacro19823 Vaccinium macrocarpon HOM05D005319 ORTHO05D006632 5.2e-118 429.1 423 53.4
Lj5A285G49 Lonicera japonica HOM05D005319 ORTHO05D006632 2.0e-117 427.2 406 54.9
Peaxi162Scf00011g02012 Petunia axillaris HOM05D005319 ORTHO05D006632 5.8e-117 425.6 481 53.4
EL10As26g24243 Beta vulgaris HOM05D005319 ORTHO05D006632 1.7e-113 414.1 423 51.3
Atru.chr6.211 Acer truncatum HOM05D005319 ORTHO05D006632 1.9e-112 410.6 450 49.3
Cfa004432 Carpinus fangiana HOM05D005319 ORTHO05D006632 1.9e-112 410.6 435 54.3
Potri.004G229732 Populus trichocarpa HOM05D005319 ORTHO05D006632 4.3e-112 409.5 423 50.6
AUR62042963 Chenopodium quinoa HOM05D005319 ORTHO05D006632 9.5e-112 408.3 405 52.6
CANSAT01G0698 Cannabis sativa HOM05D005319 ORTHO05D006632 1.2e-111 407.9 496 53.2
Haze_09972 Corylus avellana HOM05D005319 ORTHO05D006632 1.1e-110 404.8 513 50.7
COL.COLO4_31114 Corchorus olitorius HOM05D005319 ORTHO05D006632 1.4e-110 404.4 423 54.4
Thecc.06G020300 Theobroma cacao HOM05D005319 ORTHO05D006632 1.4e-110 404.4 423 54.4
Sabra01G0174900 Salix brachista HOM05D005319 ORTHO05D006632 5.2e-110 402.5 450 48.4
HanXRQChr03g0090101 Helianthus annuus HOM05D005319 ORTHO05D006632 8.9e-110 401.7 423 56.5
Nn5g27146 Nelumbo nucifera HOM05D005319 ORTHO05D006632 2.6e-109 400.2 423 49.2
AUR62041124 Chenopodium quinoa HOM05D005319 ORTHO05D006632 7.5e-109 398.7 401 51.9
unitig_8.g2963 Utricularia gibba HOM05D005319 ORTHO05D006632 1.7e-108 397.5 467 53.5
Eucgr.I02798 Eucalyptus grandis HOM05D005319 ORTHO05D006632 2.2e-108 397.1 423 48.7
Ciclev10000238m.g Citrus clementina HOM05D005319 ORTHO05D006632 4.9e-108 396.0 472 46.4
DCAR_003273 Daucus carota HOM05D005319 ORTHO05D006632 8.3e-108 395.2 423 49.4
Duzib192G0868 Durio zibethinus HOM05D005319 ORTHO05D006632 8.3e-108 395.2 423 53.0
FAN13G2205 Fragaria x ananassa HOM05D005319 ORTHO05D006632 8.3e-108 395.2 475 52.6
RcHm_v2.0_Chr7g0219031 Rosa chinensis HOM05D005319 ORTHO05D006632 8.3e-108 395.2 427 55.3
MD15G1443600 Malus domestica HOM05D005319 ORTHO05D006632 1.4e-107 394.4 423 55.3
FAN18G0588 Fragaria x ananassa HOM05D005319 ORTHO05D006632 9.2e-107 391.7 475 50.9
FvH4_5g27610 Fragaria vesca HOM05D005319 ORTHO05D006632 1.2e-106 391.3 475 50.7
THA.LOC104806623 Tarenaya hassleriana HOM05D005319 ORTHO05D006632 1.2e-106 391.3 484 49.8
FAN04G2290 Fragaria x ananassa HOM05D005319 ORTHO05D006632 1.6e-106 391.0 477 53.0
CiPaw.05G159300 Carya illinoinensis HOM05D005319 ORTHO05D006632 4.6e-106 389.4 513 46.6
Prupe.1G586100 Prunus persica HOM05D005319 ORTHO05D006632 4.6e-106 389.4 508 49.6
Dinv29683 Davidia involucrata HOM05D005319 ORTHO05D006632 6.0e-106 389.0 484 48.1
Sc12g0006940 Simmondsia chinensis HOM05D005319 ORTHO05D006632 6.0e-106 389.0 474 51.9
MD08G1248800 Malus domestica HOM05D005319 ORTHO05D006632 1.0e-105 388.3 478 49.8
Nn4g24765 Nelumbo nucifera HOM05D005319 ORTHO05D006632 1.0e-105 388.3 423 48.5
Lj5g0014697 Lotus japonicus HOM05D005319 ORTHO05D006632 1.7e-105 387.5 423 49.4
Lsat_1_v5_gn_9_125320 Lactuca sativa HOM05D005319 ORTHO05D006632 1.5e-104 384.4 431 55.2
VMungo1127G0564 Vigna mungo HOM05D005319 ORTHO05D006632 1.9e-104 384.0 423 47.8
Glyma.16G000500 Glycine max HOM05D005319 ORTHO05D006632 4.3e-104 382.9 423 48.2
ClCG11G000090 Citrullus lanatus HOM05D005319 ORTHO05D006632 7.3e-104 382.1 476 49.6
QL02p103594 Quercus lobata HOM05D005319 ORTHO05D006632 7.3e-104 382.1 423 53.2
MBI03_g21086_MAGBIO Magnolia biondii HOM05D005319 ORTHO05D006632 9.5e-104 381.7 423 51.8
TPR.G5958 Trifolium pratense HOM05D005319 ORTHO05D006632 4.7e-103 379.4 417 47.7
Gorai.009G114100 Gossypium raimondii HOM05D005319 ORTHO05D006632 6.2e-103 379.0 456 48.9
GSVIVG01023136001 Vitis vinifera HOM05D005319 ORTHO05D006632 6.2e-103 379.0 417 53.5
arahy.Tifrunner.gnm1.ann1.2TW5YI Arachis hypogaea HOM05D005319 ORTHO05D006632 8.1e-103 378.6 482 44.8
Phvul.006G221600 Phaseolus vulgaris HOM05D005319 ORTHO05D006632 1.1e-102 378.3 423 46.8
Medtr8g015930 Medicago truncatula HOM05D005319 ORTHO05D006632 1.4e-102 377.9 423 46.8
Gohir.D05G110000 Gossypium hirsutum HOM05D005319 ORTHO05D006632 1.8e-102 377.5 456 48.7
Glyma.12G164200 Glycine max HOM05D005319 ORTHO05D006632 6.8e-102 375.6 423 47.0
Gohir.A05G109700 Gossypium hirsutum HOM05D005319 ORTHO05D006632 1.2e-101 374.8 456 48.5
Cpa.g.sc173.4 Carica papaya HOM05D005319 ORTHO05D006632 3.4e-101 373.2 423 54.1
Sed0027556 Sechium edule HOM05D005319 ORTHO05D006632 9.9e-101 371.7 466 46.4
Psat1g223960 Pisum sativum HOM05D005319 ORTHO05D006632 2.2e-100 370.5 423 46.8
Gorai.011G090800 Gossypium raimondii HOM05D005319 ORTHO05D006632 2.9e-100 370.2 456 48.7
PGR142G1786 Punica granatum HOM05D005319 ORTHO05D006632 1.4e-99 367.9 423 47.5
Gohir.D10G083500 Gossypium hirsutum HOM05D005319 ORTHO05D006632 1.9e-99 367.5 456 49.6
ECA240G4281 Erigeron canadensis HOM05D005319 ORTHO05D006632 2.4e-99 367.1 423 51.1
CsaV3_5G027480 Cucumis sativus L. HOM05D005319 ORTHO05D006632 1.7e-97 360.9 475 45.9
TWI59G0928 Tripterygium wilfordii HOM05D005319 ORTHO05D006632 1.7e-97 360.9 420 46.7
CARHR231700 Cardamine hirsuta HOM05D005319 ORTHO05D006632 3.0e-97 360.1 423 51.3
Sp7g22260 Schrenkiella parvula HOM05D005319 ORTHO05D006632 3.0e-97 360.1 484 47.1
Thhalv10024416m.g Eutrema salsugineum HOM05D005319 ORTHO05D006632 3.9e-97 359.8 485 47.2
AL7G28980 Arabidopsis lyrata HOM05D005319 ORTHO05D006632 6.6e-97 359.0 540 45.6
AT4G24270 Arabidopsis thaliana HOM05D005319 ORTHO05D006632 8.6e-97 358.6 484 47.5
Aqoxy6G00019 Aquilegia oxysepala HOM05D005319 ORTHO05D006632 4.3e-96 356.3 423 46.1
Carub.0007s1678 Capsella rubella HOM05D005319 ORTHO05D006632 6.2e-95 352.4 423 50.8
HPP92_001202 Vanilla planifolia HOM05D005319 ORTHO05D006632 1.1e-94 351.7 423 44.9
Lalb_Chr18g0061161 Lupinus albus HOM05D005319 ORTHO05D006632 1.4e-94 351.3 427 46.4
MELO3C022920.2 Cucumis melo HOM05D005319 ORTHO05D006632 4.0e-94 349.7 400 46.0
Aa31LG7G10320 Aethionema arabicum HOM05D005319 ORTHO05D006632 6.8e-94 349.0 456 49.6
CDE07G1780 Ceratophyllum demersum HOM05D005319 ORTHO05D006632 6.4e-92 342.4 423 45.2
BcaNung01135 Brassica carinata HOM05D005319 ORTHO05D006632 6.0e-90 335.9 456 47.1
PSO170G3892 Papaver somniferum HOM05D005319 ORTHO05D006632 6.0e-90 335.9 417 48.7
C01p19580 Brassica napus HOM05D005319 ORTHO05D006632 1.3e-89 334.7 417 48.7
Os08g0113200 Oryza sativa ssp. japonica HOM05D005319 ORTHO05D006632 1.3e-89 334.7 423 48.0
PSO017G2844 Papaver somniferum HOM05D005319 ORTHO05D006632 1.7e-89 334.3 417 48.0
BcaC09g50887 Brassica carinata HOM05D005319 ORTHO05D006632 3.0e-89 333.6 456 44.7
ATR1089G095 Amborella trichopoda HOM05D005319 ORTHO05D006632 6.6e-89 332.4 423 42.8
Zm00001eb260720 Zea mays HOM05D005319 ORTHO05D006632 2.5e-88 330.5 423 41.8
CDE04G1013 Ceratophyllum demersum HOM05D005319 ORTHO05D006632 6.2e-87 325.9 423 47.8
A01p15600 Brassica napus HOM05D005319 ORTHO05D006632 1.5e-85 321.2 514 45.1
BraA01t01501Z Brassica rapa HOM05D005319 ORTHO05D006632 2.0e-85 320.9 514 44.6
BolC1t01883H Brassica oleracea HOM05D005319 ORTHO05D006632 3.4e-85 320.1 456 44.1
Actinidia01642 Actinidia chinensis HOM05D005319 ORTHO05D006632 1.2e-77 295.0 479 44.3
Pp3c2_22040 Physcomitrium patens HOM05D005319 ORTHO05D006632 7.9e-74 282.3 416 36.8
AagrBONN_evm.TU.Sc2ySwM_228.2043 Anthoceros agrestis HOM05D005319 ORTHO05D006632 7.4e-72 275.8 415 39.3
SMO367G0583 Selaginella moellendorffii HOM05D005319 ORTHO05D006632 2.1e-71 274.2 427 38.2
Prupe.2G119000 Prunus persica HOM05D005319 ORTHO05D006632 1.7e-68 264.6 468 39.5
Mapoly0013s0201 Marchantia polymorpha HOM05D005319 ORTHO05D006632 4.9e-68 263.1 420 34.3
SHI04989 Sapria himalayana HOM05D005319 ORTHO05D006632 1.6e-63 248.1 317 44.2
CBR_g44339 Chara braunii HOM05D005319 ORTHO05D006632 8.2e-63 245.7 428 33.9
C01p22600 Brassica napus HOM05D005319 ORTHO05D006632 1.3e-60 238.4 304 43.1
Ca_28127_v3 Cicer arietinum L. HOM05D005319 ORTHO05D006632 1.2e-42 178.7 185 50.3
Gohir.A10G157900 Gossypium hirsutum HOM05D005319 ORTHO05D006632 3.9e-41 173.7 177 60.5
Ca_00016_v3 Cicer arietinum L. HOM05D005319 ORTHO05D006632 5.7e-40 169.9 171 52.0
Cre12.g546700 Chlamydomonas reinhardtii HOM05D005319 ORTHO05D006632 2.8e-39 167.5 368 30.7
SEGI_30405 Sequoiadendron giganteum HOM05D005319 ORTHO05D006632 9.4e-27 125.9 104 54.8
MCO03G034 Micromonas commoda HOM05D005319 ORTHO05D006632 1.2e-18 99.0 261 31.0
SHI04988 Sapria himalayana HOM05D005319 ORTHO05D006632 1.6e-18 98.6 113 45.1
BcaC09g50640 Brassica carinata HOM05D005319 ORTHO05D006632 2.3e-17 94.7 96 47.9
SEGI_30773 Sequoiadendron giganteum HOM05D005319 ORTHO05D006632 3.7e-15 87.4 128 38.3
PRCOL_00002327 Prasinoderma coloniale HOM05D005319 ORTHO05D006632 9.2e-14 82.8 326 23.0
Lj1A1166G72 Lonicera japonica HOM05D005319 ORTHO05D006632 2.0e-13 81.6 158 35.4


User provided reference genes

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