Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 1.5e-217 759.2 381 100.0
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 5.2e-178 627.9 385 83.4
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 6.0e-174 614.4 381 82.4
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 6.2e-171 604.4 391 80.1
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 2.8e-155 552.4 391 74.4
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 3.6e-155 552.0 396 72.7
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 1.5e-153 546.6 394 72.8
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 8.7e-149 530.8 408 68.9
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 1.3e-147 526.9 397 70.0
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 1.3e-147 526.9 397 70.0
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 2.8e-147 525.8 396 69.9
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 3.6e-147 525.4 400 69.2
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 1.4e-146 523.5 411 66.2
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 3.1e-146 522.3 400 69.0
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 6.9e-146 521.2 411 66.9
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 1.3e-144 516.9 410 66.8
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 1.3e-144 516.9 410 66.8
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.9e-144 515.8 421 65.8
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 4.9e-144 515.0 411 66.4
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 8.4e-144 514.2 409 66.0
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 8.4e-144 514.2 409 65.0
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 1.4e-143 513.5 412 66.7
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.9e-143 513.1 415 66.3
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 2.4e-143 512.7 384 71.4
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 4.2e-143 511.9 411 65.2
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 5.4e-143 511.5 401 66.8
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 5.4e-143 511.5 416 66.8
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 7.1e-143 511.1 411 66.2
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 7.1e-143 511.1 414 66.4
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 9.3e-143 510.8 411 66.2
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 1.2e-142 510.4 411 66.2
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 2.1e-142 509.6 408 65.9
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 2.7e-142 509.2 411 65.0
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 3.5e-142 508.8 411 65.0
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 4.6e-142 508.4 410 65.4
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 6.0e-142 508.1 412 65.3
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 3.0e-141 505.8 409 65.5
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 3.0e-141 505.8 408 65.0
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 1.5e-140 503.4 396 65.7
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 2.5e-140 502.7 422 63.5
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 5.6e-140 501.5 396 65.4
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 1.3e-139 500.4 412 64.6
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 1.6e-139 500.0 420 63.1
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.6e-139 500.0 439 63.3
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 1.6e-139 500.0 402 65.2
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 2.1e-139 499.6 416 64.7
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 2.8e-139 499.2 406 63.8
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 3.7e-139 498.8 394 64.7
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 4.8e-139 498.4 415 62.9
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 4.8e-139 498.4 407 64.9
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 1.4e-138 496.9 403 65.3
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 1.8e-138 496.5 396 64.1
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 2.4e-138 496.1 406 62.6
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 2.4e-138 496.1 389 65.3
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 3.1e-138 495.7 406 62.3
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 4.0e-138 495.4 415 62.4
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 4.0e-138 495.4 415 65.1
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 9.0e-138 494.2 412 62.9
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 1.2e-137 493.8 416 63.2
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 1.2e-137 493.8 392 65.3
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 4.5e-137 491.9 415 62.9
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 5.8e-137 491.5 406 66.0
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 7.6e-137 491.1 396 64.9
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 2.2e-136 489.6 398 65.6
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 2.9e-136 489.2 397 63.7
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 9.3e-135 484.2 397 64.5
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 1.6e-134 483.4 403 63.5
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 2.3e-133 479.6 380 68.2
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 8.7e-133 477.6 411 61.6
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 1.5e-132 476.9 407 62.4
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 8.2e-131 471.1 392 66.6
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 2.0e-129 466.5 391 64.7
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 1.0e-128 464.2 415 60.7
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 1.7e-128 463.4 406 61.6
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 1.7e-128 463.4 406 61.6
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 1.7e-128 463.4 406 61.6
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 3.8e-128 462.2 410 61.5
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 4.9e-128 461.8 410 61.2
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 6.5e-128 461.5 413 60.0
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 3.2e-127 459.1 416 59.9
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 7.1e-127 458.0 408 61.0
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 1.6e-126 456.8 415 59.8
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 2.1e-126 456.4 413 59.8
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 2.1e-126 456.4 414 59.9
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 3.5e-126 455.7 413 60.0
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 1.6e-123 446.8 410 59.8
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 2.8e-123 446.0 461 54.9
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 6.3e-123 444.9 412 59.5
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 2.4e-122 443.0 379 62.0
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 1.2e-121 440.7 413 58.8
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 7.7e-121 438.0 407 59.7
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 2.5e-119 433.0 377 62.3
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 4.2e-119 432.2 405 59.8
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 3.0e-117 426.0 399 60.4
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 5.3e-106 388.7 359 60.7
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 1.2e-102 377.5 391 52.2
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 8.0e-102 374.8 250 76.0
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 8.0e-102 374.8 462 45.2
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 6.3e-99 365.2 251 75.3
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 2.7e-94 349.7 402 50.2
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 3.0e-93 346.3 254 70.5
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 9.7e-92 341.3 466 41.8
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 3.1e-90 336.3 244 73.0
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 2.0e-89 333.6 264 67.0
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 1.0e-88 331.3 164 99.4
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 6.5e-88 328.6 244 71.7
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 9.1e-82 308.1 465 40.4
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 9.8e-76 288.1 422 41.2
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 1.4e-61 241.1 276 52.5
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 5.4e-58 229.2 182 67.6
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 9.6e-47 191.8 177 52.0
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 2.6e-36 157.1 465 27.5
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 5.4e-34 149.4 486 24.7
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 3.9e-32 143.3 436 28.0
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 4.8e-30 136.3 137 52.6
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 6.4e-27 125.9 191 44.0
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 4.8e-22 109.8 151 47.7
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 6.2e-22 109.4 70 78.6
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 8.1e-22 109.0 98 60.2
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 1.8e-13 81.3 114 42.1


User provided reference genes

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